RNA–Protein interactions for RNA: ENST00000515588.1

SERF1B-208, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2 BASIC

Gene SERF1B, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-208ENST00000515588 IGHA2P01877 340 aa18.57■□□□□ 0.56
SERF1B-208ENST00000515588 TOP1P11387 765 aaKnown RBP18.57■□□□□ 0.56
SERF1B-208ENST00000515588 KCTD1Q719H9 257 aa18.57■□□□□ 0.56
SERF1B-208ENST00000515588 TRMT44Q8IYL2 757 aaKnown RBP18.57■□□□□ 0.56
SERF1B-208ENST00000515588 U2AF1L4Q8WU68 220 aaKnown RBP18.57■□□□□ 0.56
SERF1B-208ENST00000515588 ZKSCAN3Q9BRR0 538 aa18.57■□□□□ 0.56
SERF1B-208ENST00000515588 SLC38A10Q9HBR0 1119 aa18.57■□□□□ 0.56
SERF1B-208ENST00000515588 MTMR7Q9Y216 660 aa18.57■□□□□ 0.56
SERF1B-208ENST00000515588 RIPK3Q9Y572 518 aa18.57■□□□□ 0.56
SERF1B-208ENST00000515588 ATP2A1O14983 1001 aa18.56■□□□□ 0.56
SERF1B-208ENST00000515588 PRKAR2AP13861 404 aaKnown RBP18.56■□□□□ 0.56
SERF1B-208ENST00000515588 CACNB2Q08289 660 aaPredicted RBP18.56■□□□□ 0.56
SERF1B-208ENST00000515588 BMP2KLQ5H9B9 411 aa18.56■□□□□ 0.56
SERF1B-208ENST00000515588 TTC14Q96N46 770 aa18.56■□□□□ 0.56
SERF1B-208ENST00000515588 DEFB118Q96PH6 123 aa18.56■□□□□ 0.56
SERF1B-208ENST00000515588 TEX13BQ9BXU2 312 aa18.56■□□□□ 0.56
SERF1B-208ENST00000515588 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.56■□□□□ 0.56
SERF1B-208ENST00000515588 TAF6LQ9Y6J9 622 aa18.56■□□□□ 0.56
SERF1B-208ENST00000515588 RPTORQ8N122 1335 aa18.55■□□□□ 0.56
SERF1B-208ENST00000515588 PLA2G6O60733 806 aa18.55■□□□□ 0.56
SERF1B-208ENST00000515588 ZBED4O75132 1171 aa18.55■□□□□ 0.56
SERF1B-208ENST00000515588 SGPL1O95470 568 aa18.55■□□□□ 0.56
SERF1B-208ENST00000515588 CYP21A2P08686 494 aa18.55■□□□□ 0.56
SERF1B-208ENST00000515588 STAT2P52630 851 aa18.55■□□□□ 0.56
SERF1B-208ENST00000515588 SNRNP48Q6IEG0 339 aaKnown RBP18.55■□□□□ 0.56
SERF1B-208ENST00000515588 ABRAQ8N0Z2 381 aa18.55■□□□□ 0.56
SERF1B-208ENST00000515588 CPXCR1Q8N123 301 aa18.55■□□□□ 0.56
SERF1B-208ENST00000515588 RAVER2Q9HCJ3 691 aaKnown RBP18.55■□□□□ 0.56
SERF1B-208ENST00000515588 ZSWIM5Q9P217 1185 aa18.55■□□□□ 0.56
SERF1B-208ENST00000515588 ISY1Q9ULR0 285 aaKnown RBP18.55■□□□□ 0.56
SERF1B-208ENST00000515588 ZNF236Q9UL36 1845 aa18.54■□□□□ 0.56
SERF1B-208ENST00000515588 FCER1AP12319 257 aa18.54■□□□□ 0.56
SERF1B-208ENST00000515588 TTBK2Q6IQ55 1244 aa18.54■□□□□ 0.56
SERF1B-208ENST00000515588 UBE2Q1Q7Z7E8 422 aa18.54■□□□□ 0.56
SERF1B-208ENST00000515588 DPP9Q86TI2 863 aa18.54■□□□□ 0.56
SERF1B-208ENST00000515588 FAM160B2Q86V87 743 aa18.54■□□□□ 0.56
SERF1B-208ENST00000515588 POTEDQ86YR6 584 aa18.54■□□□□ 0.56
SERF1B-208ENST00000515588 CHURC1Q8WUH1 139 aa18.54■□□□□ 0.56
SERF1B-208ENST00000515588 DCAF4Q8WV16 495 aa18.54■□□□□ 0.56
SERF1B-208ENST00000515588 MAP4K1Q92918 833 aa18.54■□□□□ 0.56
SERF1B-208ENST00000515588 CRISPLD2Q9H0B8 497 aa18.54■□□□□ 0.56
SERF1B-208ENST00000515588 HMX1Q9NP08 348 aaPredicted RBP18.54■□□□□ 0.56
SERF1B-208ENST00000515588 U3KPZ7 1027 aaPredicted RBP18.54■□□□□ 0.56
SERF1B-208ENST00000515588 NEFLP07196 543 aa18.53■□□□□ 0.56
SERF1B-208ENST00000515588 PDHBP11177 359 aa18.53■□□□□ 0.56
SERF1B-208ENST00000515588 CCND3P30281 292 aaPredicted RBP18.53■□□□□ 0.56
SERF1B-208ENST00000515588 CYP2C19P33261 490 aa18.53■□□□□ 0.56
SERF1B-208ENST00000515588 NT5C2P49902 561 aa18.53■□□□□ 0.56
SERF1B-208ENST00000515588 SNAP25P60880 206 aa18.53■□□□□ 0.56
SERF1B-208ENST00000515588 CCDC96Q2M329 555 aa18.53■□□□□ 0.56
SERF1B-208ENST00000515588 DGKHQ86XP1 1220 aa18.53■□□□□ 0.56
SERF1B-208ENST00000515588 ANKS1AQ92625 1134 aa18.53■□□□□ 0.56
SERF1B-208ENST00000515588 MMP19Q99542 508 aa18.53■□□□□ 0.56
SERF1B-208ENST00000515588 ESYT1Q9BSJ8 1104 aa18.53■□□□□ 0.56
SERF1B-208ENST00000515588 KRT23Q9C075 422 aa18.53■□□□□ 0.56
SERF1B-208ENST00000515588 ZNF536O15090 1300 aa18.52■□□□□ 0.56
SERF1B-208ENST00000515588 PGK2P07205 417 aa18.52■□□□□ 0.56
SERF1B-208ENST00000515588 SNHG28P0DPA3 235 aa18.52■□□□□ 0.56
SERF1B-208ENST00000515588 COPB2P35606 906 aa18.52■□□□□ 0.56
SERF1B-208ENST00000515588 SLC16A2P36021 539 aa18.52■□□□□ 0.56
SERF1B-208ENST00000515588 SLC4A3P48751 1232 aa18.52■□□□□ 0.56
SERF1B-208ENST00000515588 IKQ13123 557 aaPredicted RBP18.52■□□□□ 0.56
SERF1B-208ENST00000515588 OLFML2BQ68BL8 750 aa18.52■□□□□ 0.56
SERF1B-208ENST00000515588 CYB5R4Q7L1T6 521 aa18.52■□□□□ 0.56
SERF1B-208ENST00000515588 IQCA1Q86XH1 822 aa18.52■□□□□ 0.56
SERF1B-208ENST00000515588 ENAHQ8N8S7 591 aaPredicted RBP18.52■□□□□ 0.56
SERF1B-208ENST00000515588 ZSCAN10Q96SZ4 725 aaPredicted RBP18.52■□□□□ 0.56
SERF1B-208ENST00000515588 LSG1Q9H089 658 aaKnown RBP18.52■□□□□ 0.56
SERF1B-208ENST00000515588 CNNM2Q9H8M5 875 aa18.52■□□□□ 0.56
SERF1B-208ENST00000515588 PRR12Q9ULL5 1215 aa18.52■□□□□ 0.56
SERF1B-208ENST00000515588 CTDP1Q9Y5B0 961 aaPredicted RBP18.52■□□□□ 0.56
SERF1B-208ENST00000515588 FRMPD2Q68DX3 1309 aaPredicted RBP18.51■□□□□ 0.55
SERF1B-208ENST00000515588 TFRCP02786 760 aaKnown RBP18.51■□□□□ 0.55
SERF1B-208ENST00000515588 FDX1P10109 184 aa18.51■□□□□ 0.55
SERF1B-208ENST00000515588 OAZ1P54368 228 aa18.51■□□□□ 0.55
SERF1B-208ENST00000515588 ZNF792Q3KQV3 632 aa18.51■□□□□ 0.55
SERF1B-208ENST00000515588 MFSD14CQ5VZR4 134 aa18.51■□□□□ 0.55
SERF1B-208ENST00000515588 BTNL9Q6UXG8 535 aa18.51■□□□□ 0.55
SERF1B-208ENST00000515588 STOX1Q6ZVD7 989 aa18.51■□□□□ 0.55
SERF1B-208ENST00000515588 TRPV1Q8NER1 839 aa18.51■□□□□ 0.55
SERF1B-208ENST00000515588 AGBL1Q96MI9 1066 aa18.51■□□□□ 0.55
SERF1B-208ENST00000515588 GPCPD1Q9NPB8 672 aa18.51■□□□□ 0.55
SERF1B-208ENST00000515588 RBM8AQ9Y5S9 174 aaKnown RBP18.51■□□□□ 0.55
SERF1B-208ENST00000515588 TNKSO95271 1327 aa18.5■□□□□ 0.55
SERF1B-208ENST00000515588 ZNF543Q08ER8 600 aa18.5■□□□□ 0.55
SERF1B-208ENST00000515588 KCTD2Q14681 263 aa18.5■□□□□ 0.55
SERF1B-208ENST00000515588 CCDC178Q5BJE1 867 aa18.5■□□□□ 0.55
SERF1B-208ENST00000515588 MAML3Q96JK9 1138 aa18.5■□□□□ 0.55
SERF1B-208ENST00000515588 ZNFX1Q9P2E3 1918 aaKnown RBP18.5■□□□□ 0.55
SERF1B-208ENST00000515588 E7EWF7 191 aa18.49■□□□□ 0.55
SERF1B-208ENST00000515588 SEC23AQ15436 765 aa18.49■□□□□ 0.55
SERF1B-208ENST00000515588 SYDE2Q5VT97 1194 aa18.49■□□□□ 0.55
SERF1B-208ENST00000515588 LHX8Q68G74 356 aa18.49■□□□□ 0.55
SERF1B-208ENST00000515588 CCDC174Q6PII3 467 aa18.49■□□□□ 0.55
SERF1B-208ENST00000515588 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.49■□□□□ 0.55
SERF1B-208ENST00000515588 PNMA1Q8ND90 353 aa18.49■□□□□ 0.55
SERF1B-208ENST00000515588 SLC5A4Q9NY91 659 aa18.49■□□□□ 0.55
SERF1B-208ENST00000515588 DNAJC25-GNG10A0A024R161 153 aa18.48■□□□□ 0.55
SERF1B-208ENST00000515588 FARP2O94887 1054 aaPredicted RBP18.48■□□□□ 0.55
SERF1B-208ENST00000515588 GOLGA8HP0CJ92 632 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms