RNA–Protein interactions for RNA: ENST00000515289.2

NPHP3-211, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-211ENST00000515289 MENTQ9BUN1 341 aa8.58□□□□□ -1.04
NPHP3-211ENST00000515289 SMG9Q9H0W8 520 aaKnown RBP8.58□□□□□ -1.04
NPHP3-211ENST00000515289 FBRSQ9HAH7 460 aa8.58□□□□□ -1.04
NPHP3-211ENST00000515289 PRDM11Q9NQV5 511 aa8.58□□□□□ -1.04
NPHP3-211ENST00000515289 FRRS1LQ9P0K9 344 aa8.58□□□□□ -1.04
NPHP3-211ENST00000515289 PRAMEF27A3QJZ7 478 aa8.57□□□□□ -1.04
NPHP3-211ENST00000515289 RGS13O14921 159 aa8.57□□□□□ -1.04
NPHP3-211ENST00000515289 CBFA2T2O43439 604 aa8.57□□□□□ -1.04
NPHP3-211ENST00000515289 ZNF862O60290 1169 aa8.57□□□□□ -1.04
NPHP3-211ENST00000515289 SIN3BO75182 1162 aa8.57□□□□□ -1.04
NPHP3-211ENST00000515289 FGAP02671 866 aa8.57□□□□□ -1.04
NPHP3-211ENST00000515289 TP53P04637 393 aaPredicted RBP8.57□□□□□ -1.04
NPHP3-211ENST00000515289 FGFR3P22607 806 aa8.57□□□□□ -1.04
NPHP3-211ENST00000515289 POU4F3Q15319 338 aa8.57□□□□□ -1.04
NPHP3-211ENST00000515289 DBN1Q16643 649 aa8.57□□□□□ -1.04
NPHP3-211ENST00000515289 CFAP100Q494V2 611 aa8.57□□□□□ -1.04
NPHP3-211ENST00000515289 ELMSAN1Q6PJG2 1045 aa8.57□□□□□ -1.04
NPHP3-211ENST00000515289 MCATQ8IVS2 390 aaKnown RBP8.57□□□□□ -1.04
NPHP3-211ENST00000515289 IFNL3Q8IZI9 196 aa8.57□□□□□ -1.04
NPHP3-211ENST00000515289 FAM13CQ8NE31 585 aa8.57□□□□□ -1.04
NPHP3-211ENST00000515289 GMCL1Q96IK5 515 aa8.57□□□□□ -1.04
NPHP3-211ENST00000515289 ORAI3Q9BRQ5 295 aa8.57□□□□□ -1.04
NPHP3-211ENST00000515289 WNT10AQ9GZT5 417 aa8.57□□□□□ -1.04
NPHP3-211ENST00000515289 FAM86C1Q9NVL1 165 aa8.57□□□□□ -1.04
NPHP3-211ENST00000515289 SLC6A14Q9UN76 642 aa8.57□□□□□ -1.04
NPHP3-211ENST00000515289 UHRF1BP1LA0JNW5 1464 aa8.57□□□□□ -1.04
NPHP3-211ENST00000515289 ABCC5O15440 1437 aa8.56□□□□□ -1.04
NPHP3-211ENST00000515289 DAPK1P53355 1430 aa8.56□□□□□ -1.04
NPHP3-211ENST00000515289 DNMT1P26358 1616 aaKnown RBP8.56□□□□□ -1.04
NPHP3-211ENST00000515289 VSTM5A8MXK1 200 aa8.56□□□□□ -1.04
NPHP3-211ENST00000515289 DCDC2CA8MYV0 355 aa8.56□□□□□ -1.04
NPHP3-211ENST00000515289 B4E1Z4 1266 aa8.56□□□□□ -1.04
NPHP3-211ENST00000515289 K7ESF4 209 aa8.56□□□□□ -1.04
NPHP3-211ENST00000515289 ECEL1O95672 775 aa8.56□□□□□ -1.04
NPHP3-211ENST00000515289 IFIT2P09913 472 aaKnown RBP8.56□□□□□ -1.04
NPHP3-211ENST00000515289 IRX6P78412 446 aaPredicted RBP8.56□□□□□ -1.04
NPHP3-211ENST00000515289 KIF4BQ2VIQ3 1234 aa8.56□□□□□ -1.04
NPHP3-211ENST00000515289 TDRD10Q5VZ19 366 aaKnown RBP8.56□□□□□ -1.04
NPHP3-211ENST00000515289 TRIM67Q6ZTA4 783 aa8.56□□□□□ -1.04
NPHP3-211ENST00000515289 UBE2R2Q712K3 238 aaPredicted RBP8.56□□□□□ -1.04
NPHP3-211ENST00000515289 SYT9Q86SS6 491 aa8.56□□□□□ -1.04
NPHP3-211ENST00000515289 PHACTR4Q8IZ21 702 aa8.56□□□□□ -1.04
NPHP3-211ENST00000515289 BVESQ8NE79 360 aa8.56□□□□□ -1.04
NPHP3-211ENST00000515289 PTPRN2Q92932 1015 aa8.56□□□□□ -1.04
NPHP3-211ENST00000515289 SCLYQ96I15 445 aa8.56□□□□□ -1.04
NPHP3-211ENST00000515289 GBP3Q9H0R5 595 aa8.56□□□□□ -1.04
NPHP3-211ENST00000515289 TCF7L1Q9HCS4 588 aa8.56□□□□□ -1.04
NPHP3-211ENST00000515289 CRTAC1Q9NQ79 661 aa8.56□□□□□ -1.04
NPHP3-211ENST00000515289 NAGPAQ9UK23 515 aa8.56□□□□□ -1.04
NPHP3-211ENST00000515289 PHF24Q9UPV7 400 aa8.56□□□□□ -1.04
NPHP3-211ENST00000515289 C9IYK1 514 aa8.55□□□□□ -1.04
NPHP3-211ENST00000515289 PYGMP11217 842 aa8.55□□□□□ -1.04
NPHP3-211ENST00000515289 BMP1P13497 986 aa8.55□□□□□ -1.04
NPHP3-211ENST00000515289 PDE6BP35913 854 aa8.55□□□□□ -1.04
NPHP3-211ENST00000515289 POU5F1BQ06416 359 aa8.55□□□□□ -1.04
NPHP3-211ENST00000515289 RING1Q06587 406 aa8.55□□□□□ -1.04
NPHP3-211ENST00000515289 C19orf57Q0VDD7 668 aa8.55□□□□□ -1.04
NPHP3-211ENST00000515289 RAPGEF1Q13905 1077 aa8.55□□□□□ -1.04
NPHP3-211ENST00000515289 ZNF468Q5VIY5 522 aaPredicted RBP8.55□□□□□ -1.04
NPHP3-211ENST00000515289 CDCA2Q69YH5 1023 aaPredicted RBP8.55□□□□□ -1.04
NPHP3-211ENST00000515289 CLEC4GQ6UXB4 293 aa8.55□□□□□ -1.04
NPHP3-211ENST00000515289 TRIM46Q7Z4K8 759 aa8.55□□□□□ -1.04
NPHP3-211ENST00000515289 SPICE1Q8N0Z3 855 aa8.55□□□□□ -1.04
NPHP3-211ENST00000515289 TTC9Q92623 222 aa8.55□□□□□ -1.04
NPHP3-211ENST00000515289 TNFRSF25Q93038 417 aa8.55□□□□□ -1.04
NPHP3-211ENST00000515289 WNT8BQ93098 351 aa8.55□□□□□ -1.04
NPHP3-211ENST00000515289 E2F7Q96AV8 911 aa8.55□□□□□ -1.04
NPHP3-211ENST00000515289 MRGPRX3Q96LB0 322 aa8.55□□□□□ -1.04
NPHP3-211ENST00000515289 LPIN3Q9BQK8 851 aa8.55□□□□□ -1.04
NPHP3-211ENST00000515289 SARGQ9BW04 601 aa8.55□□□□□ -1.04
NPHP3-211ENST00000515289 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.55□□□□□ -1.04
NPHP3-211ENST00000515289 INTUQ9ULD6 942 aa8.55□□□□□ -1.04
NPHP3-211ENST00000515289 CAMSAP2Q08AD1 1489 aa8.55□□□□□ -1.04
NPHP3-211ENST00000515289 GCC2Q8IWJ2 1684 aa8.55□□□□□ -1.04
NPHP3-211ENST00000515289 ITSN2Q9NZM3 1697 aa8.55□□□□□ -1.04
NPHP3-211ENST00000515289 ZNF644Q9H582 1327 aaPredicted RBP8.54□□□□□ -1.04
NPHP3-211ENST00000515289 ROCK1Q13464 1354 aa8.54□□□□□ -1.04
NPHP3-211ENST00000515289 TCRBV16S1A1N1A0A5B0 115 aa8.54□□□□□ -1.04
NPHP3-211ENST00000515289 SLC35F4A4IF30 521 aa8.54□□□□□ -1.04
NPHP3-211ENST00000515289 NOP56O00567 594 aaKnown RBP8.54□□□□□ -1.04
NPHP3-211ENST00000515289 TBX1O43435 398 aa8.54□□□□□ -1.04
NPHP3-211ENST00000515289 NRDCO43847 1150 aa8.54□□□□□ -1.04
NPHP3-211ENST00000515289 UBOX5O94941 541 aa8.54□□□□□ -1.04
NPHP3-211ENST00000515289 MAOBP27338 520 aa8.54□□□□□ -1.04
NPHP3-211ENST00000515289 ID4P47928 161 aa8.54□□□□□ -1.04
NPHP3-211ENST00000515289 ARL4DP49703 201 aa8.54□□□□□ -1.04
NPHP3-211ENST00000515289 SCNN1BP51168 640 aa8.54□□□□□ -1.04
NPHP3-211ENST00000515289 ETF1P62495 437 aaKnown RBP8.54□□□□□ -1.04
NPHP3-211ENST00000515289 PIP4K2BP78356 416 aa8.54□□□□□ -1.04
NPHP3-211ENST00000515289 GRB10Q13322 594 aa8.54□□□□□ -1.04
NPHP3-211ENST00000515289 TCIRG1Q13488 830 aa8.54□□□□□ -1.04
NPHP3-211ENST00000515289 GRAMD1BQ3KR37 738 aa8.54□□□□□ -1.04
NPHP3-211ENST00000515289 ZC3H12AQ5D1E8 599 aaKnown RBP8.54□□□□□ -1.04
NPHP3-211ENST00000515289 MAMDC2Q7Z304 686 aaPredicted RBP8.54□□□□□ -1.04
NPHP3-211ENST00000515289 KIF18BQ86Y91 864 aa8.54□□□□□ -1.04
NPHP3-211ENST00000515289 NME8Q8N427 588 aa8.54□□□□□ -1.04
NPHP3-211ENST00000515289 RNF166Q96A37 237 aaPredicted RBP8.54□□□□□ -1.04
NPHP3-211ENST00000515289 MAGEB10Q96LZ2 347 aaPredicted RBP8.54□□□□□ -1.04
NPHP3-211ENST00000515289 FGD4Q96M96 766 aa8.54□□□□□ -1.04
NPHP3-211ENST00000515289 ZFP42Q96MM3 310 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms