RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 USP17L10C9JJH3 530 aa10.8□□□□□ -0.68
DHFR-206ENST00000513048 STXBP3O00186 592 aa10.8□□□□□ -0.68
DHFR-206ENST00000513048 ADAMTS3O15072 1205 aa10.8□□□□□ -0.68
DHFR-206ENST00000513048 PPP1R11O60927 126 aaPredicted RBP10.8□□□□□ -0.68
DHFR-206ENST00000513048 BMP3P12645 472 aa10.8□□□□□ -0.68
DHFR-206ENST00000513048 U2AF2P26368 475 aaKnown RBP eCLIP10.8□□□□□ -0.68
DHFR-206ENST00000513048 SLC16A2P36021 539 aa10.8□□□□□ -0.68
DHFR-206ENST00000513048 MAP3K9P80192 1104 aa10.8□□□□□ -0.68
DHFR-206ENST00000513048 DNM1Q05193 864 aaKnown RBP10.8□□□□□ -0.68
DHFR-206ENST00000513048 LHX8Q68G74 356 aa10.8□□□□□ -0.68
DHFR-206ENST00000513048 WWC2Q6AWC2 1192 aa10.8□□□□□ -0.68
DHFR-206ENST00000513048 PIBF1Q8WXW3 757 aa10.8□□□□□ -0.68
DHFR-206ENST00000513048 GPKOWQ92917 476 aaPredicted RBP eCLIP10.8□□□□□ -0.68
DHFR-206ENST00000513048 TNFRSF25Q93038 417 aa10.8□□□□□ -0.68
DHFR-206ENST00000513048 RRP36Q96EU6 259 aaKnown RBP10.8□□□□□ -0.68
DHFR-206ENST00000513048 SH2D4AQ9H788 454 aa10.8□□□□□ -0.68
DHFR-206ENST00000513048 GOPCQ9HD26 462 aa10.8□□□□□ -0.68
DHFR-206ENST00000513048 SH3GLB2Q9NR46 395 aa10.8□□□□□ -0.68
DHFR-206ENST00000513048 PARP14Q460N5 1801 aa10.79□□□□□ -0.68
DHFR-206ENST00000513048 PLA2G6O60733 806 aa10.79□□□□□ -0.68
DHFR-206ENST00000513048 PRKG1Q13976 671 aa10.79□□□□□ -0.68
DHFR-206ENST00000513048 TRIM29Q14134 588 aa10.79□□□□□ -0.68
DHFR-206ENST00000513048 VGLL4Q14135 290 aa10.79□□□□□ -0.68
DHFR-206ENST00000513048 FAM83BQ5T0W9 1011 aa10.79□□□□□ -0.68
DHFR-206ENST00000513048 MAP1SQ66K74 1059 aaPredicted RBP10.79□□□□□ -0.68
DHFR-206ENST00000513048 MOB2Q70IA6 237 aa10.79□□□□□ -0.68
DHFR-206ENST00000513048 SPICE1Q8N0Z3 855 aa10.79□□□□□ -0.68
DHFR-206ENST00000513048 FAM177A1Q8N128 213 aaPredicted RBP10.79□□□□□ -0.68
DHFR-206ENST00000513048 TMEM87AQ8NBN3 555 aa10.79□□□□□ -0.68
DHFR-206ENST00000513048 OXER1Q8TDS5 423 aa10.79□□□□□ -0.68
DHFR-206ENST00000513048 VAT1LQ9HCJ6 419 aa10.79□□□□□ -0.68
DHFR-206ENST00000513048 NMRK2Q9NPI5 230 aa10.79□□□□□ -0.68
DHFR-206ENST00000513048 EMILIN3Q9NT22 766 aa10.79□□□□□ -0.68
DHFR-206ENST00000513048 BARHL2Q9NY43 387 aa10.79□□□□□ -0.68
DHFR-206ENST00000513048 CNPY2Q9Y2B0 182 aa10.79□□□□□ -0.68
DHFR-206ENST00000513048 ATP6V1DQ9Y5K8 247 aa10.79□□□□□ -0.68
DHFR-206ENST00000513048 PTPRFP10586 1907 aa10.79□□□□□ -0.68
DHFR-206ENST00000513048 RLFQ13129 1914 aa10.78□□□□□ -0.68
DHFR-206ENST00000513048 PNMA6FA0A0J9YX94 578 aa10.78□□□□□ -0.68
DHFR-206ENST00000513048 BTBD18B2RXH4 712 aa10.78□□□□□ -0.68
DHFR-206ENST00000513048 TMEM232C9JQI7 657 aa10.78□□□□□ -0.68
DHFR-206ENST00000513048 M0R2N6 131 aa10.78□□□□□ -0.68
DHFR-206ENST00000513048 TRAF5O00463 557 aa10.78□□□□□ -0.68
DHFR-206ENST00000513048 ZBTB5O15062 677 aa10.78□□□□□ -0.68
DHFR-206ENST00000513048 FMR1Q06787 632 aaKnown RBP eCLIP10.78□□□□□ -0.68
DHFR-206ENST00000513048 SPP2Q13103 211 aa10.78□□□□□ -0.68
DHFR-206ENST00000513048 DGKZQ13574 1117 aa10.78□□□□□ -0.68
DHFR-206ENST00000513048 ZYXQ15942 572 aaKnown RBP10.78□□□□□ -0.68
DHFR-206ENST00000513048 FOXD4L6Q3SYB3 417 aaPredicted RBP10.78□□□□□ -0.68
DHFR-206ENST00000513048 LDLRAD1Q5T700 205 aa10.78□□□□□ -0.68
DHFR-206ENST00000513048 SYDE2Q5VT97 1194 aa10.78□□□□□ -0.68
DHFR-206ENST00000513048 MCTP1Q6DN14 999 aa10.78□□□□□ -0.68
DHFR-206ENST00000513048 FOXD4L3Q6VB84 417 aaPredicted RBP10.78□□□□□ -0.68
DHFR-206ENST00000513048 BRAPQ7Z569 592 aa10.78□□□□□ -0.68
DHFR-206ENST00000513048 LDHDQ86WU2 507 aa10.78□□□□□ -0.68
DHFR-206ENST00000513048 DIS3L2Q8IYB7 885 aaKnown RBP10.78□□□□□ -0.68
DHFR-206ENST00000513048 DAGLBQ8NCG7 672 aa10.78□□□□□ -0.68
DHFR-206ENST00000513048 ZNF280CQ8ND82 737 aa10.78□□□□□ -0.68
DHFR-206ENST00000513048 LPAR1Q92633 364 aa10.78□□□□□ -0.68
DHFR-206ENST00000513048 C12orf42Q96LP6 360 aa10.78□□□□□ -0.68
DHFR-206ENST00000513048 FOXP1Q9H334 677 aaPredicted RBP10.78□□□□□ -0.68
DHFR-206ENST00000513048 AS3MTQ9HBK9 375 aa10.78□□□□□ -0.68
DHFR-206ENST00000513048 PICK1Q9NRD5 415 aa10.78□□□□□ -0.68
DHFR-206ENST00000513048 LMBRD1Q9NUN5 540 aa10.78□□□□□ -0.68
DHFR-206ENST00000513048 PRR12Q9ULL5 1215 aa10.78□□□□□ -0.68
DHFR-206ENST00000513048 AFG3L2Q9Y4W6 797 aa10.78□□□□□ -0.68
DHFR-206ENST00000513048 ZHX2Q9Y6X8 837 aa10.78□□□□□ -0.68
DHFR-206ENST00000513048 ESYT2A0FGR8 921 aa10.77□□□□□ -0.69
DHFR-206ENST00000513048 hCG_1984214I3L0E3 225 aa10.77□□□□□ -0.69
DHFR-206ENST00000513048 WDR46O15213 610 aaKnown RBP10.77□□□□□ -0.69
DHFR-206ENST00000513048 RAD21O60216 631 aa10.77□□□□□ -0.69
DHFR-206ENST00000513048 PPP1R12BO60237 982 aaPredicted RBP10.77□□□□□ -0.69
DHFR-206ENST00000513048 XBP1P17861 261 aa10.77□□□□□ -0.69
DHFR-206ENST00000513048 NF2P35240 595 aa10.77□□□□□ -0.69
DHFR-206ENST00000513048 IREB2P48200 963 aaKnown RBP10.77□□□□□ -0.69
DHFR-206ENST00000513048 BACE1P56817 501 aa10.77□□□□□ -0.69
DHFR-206ENST00000513048 NR5A1Q13285 461 aa10.77□□□□□ -0.69
DHFR-206ENST00000513048 MTMR2Q13614 643 aa10.77□□□□□ -0.69
DHFR-206ENST00000513048 QRICH1Q2TAL8 776 aa10.77□□□□□ -0.69
DHFR-206ENST00000513048 SH3D19Q5HYK7 790 aa10.77□□□□□ -0.69
DHFR-206ENST00000513048 EARS2Q5JPH6 523 aaKnown RBP10.77□□□□□ -0.69
DHFR-206ENST00000513048 MYSM1Q5VVJ2 828 aa10.77□□□□□ -0.69
DHFR-206ENST00000513048 HEATR3Q7Z4Q2 680 aa10.77□□□□□ -0.69
DHFR-206ENST00000513048 HOMER1Q86YM7 354 aa10.77□□□□□ -0.69
DHFR-206ENST00000513048 NOSTRINQ8IVI9 506 aa10.77□□□□□ -0.69
DHFR-206ENST00000513048 ZNF713Q8N859 430 aaPredicted RBP10.77□□□□□ -0.69
DHFR-206ENST00000513048 CLMNQ96JQ2 1002 aa10.77□□□□□ -0.69
DHFR-206ENST00000513048 PHF12Q96QT6 1004 aa10.77□□□□□ -0.69
DHFR-206ENST00000513048 FEZ1Q99689 392 aa10.77□□□□□ -0.69
DHFR-206ENST00000513048 ZMYND12Q9H0C1 365 aa10.77□□□□□ -0.69
DHFR-206ENST00000513048 LOC285556D6RIA3 1793 aa10.77□□□□□ -0.69
DHFR-206ENST00000513048 UTRNP46939 3433 aa10.77□□□□□ -0.69
DHFR-206ENST00000513048 FAM205CA6NFA0 338 aa10.76□□□□□ -0.69
DHFR-206ENST00000513048 DDX11L8A8MPP1 907 aa10.76□□□□□ -0.69
DHFR-206ENST00000513048 C19orf81C9J6K1 198 aa10.76□□□□□ -0.69
DHFR-206ENST00000513048 GALR2O43603 387 aaPredicted RBP10.76□□□□□ -0.69
DHFR-206ENST00000513048 VCAM1P19320 739 aa10.76□□□□□ -0.69
DHFR-206ENST00000513048 KRT2P35908 639 aa10.76□□□□□ -0.69
DHFR-206ENST00000513048 TOB1P50616 345 aaPredicted RBP10.76□□□□□ -0.69
DHFR-206ENST00000513048 STAT2P52630 851 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms