RNA–Protein interactions for RNA: ENST00000512901.6

LINC01550-203, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 2,192 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-203ENST00000512901 OPTNQ96CV9 577 aa12.1□□□□□ -0.47
LINC01550-203ENST00000512901 TANGO6Q9C0B7 1094 aa12.1□□□□□ -0.47
LINC01550-203ENST00000512901 RIOX1Q9H6W3 641 aa12.1□□□□□ -0.47
LINC01550-203ENST00000512901 EMILIN3Q9NT22 766 aa12.1□□□□□ -0.47
LINC01550-203ENST00000512901 SCG2P13521 617 aa12.09□□□□□ -0.47
LINC01550-203ENST00000512901 PFKFB3Q16875 520 aaPredicted RBP12.09□□□□□ -0.47
LINC01550-203ENST00000512901 SLC35G1Q2M3R5 365 aa12.09□□□□□ -0.47
LINC01550-203ENST00000512901 SYDE2Q5VT97 1194 aa12.09□□□□□ -0.47
LINC01550-203ENST00000512901 PIGSQ96S52 555 aa12.09□□□□□ -0.47
LINC01550-203ENST00000512901 FEM1BQ9UK73 627 aa12.09□□□□□ -0.47
LINC01550-203ENST00000512901 IRF6O14896 467 aa12.09□□□□□ -0.47
LINC01550-203ENST00000512901 VCAM1P19320 739 aa12.09□□□□□ -0.47
LINC01550-203ENST00000512901 PPIL2Q13356 520 aa12.09□□□□□ -0.47
LINC01550-203ENST00000512901 PKN1Q16512 942 aa12.09□□□□□ -0.47
LINC01550-203ENST00000512901 CST9Q5W186 159 aa12.09□□□□□ -0.47
LINC01550-203ENST00000512901 FAM160B2Q86V87 743 aa12.09□□□□□ -0.47
LINC01550-203ENST00000512901 JMJD4Q9H9V9 463 aa12.09□□□□□ -0.47
LINC01550-203ENST00000512901 MTMR6Q9Y217 621 aa12.09□□□□□ -0.47
LINC01550-203ENST00000512901 ZSCAN22P10073 491 aaPredicted RBP12.08□□□□□ -0.48
LINC01550-203ENST00000512901 OTUD7BQ6GQQ9 843 aa12.08□□□□□ -0.48
LINC01550-203ENST00000512901 BTNL9Q6UXG8 535 aa12.08□□□□□ -0.48
LINC01550-203ENST00000512901 HEATR3Q7Z4Q2 680 aa12.08□□□□□ -0.48
LINC01550-203ENST00000512901 KIFC2Q96AC6 838 aa12.08□□□□□ -0.48
LINC01550-203ENST00000512901 C12orf42Q96LP6 360 aa12.08□□□□□ -0.48
LINC01550-203ENST00000512901 RPAP3Q9H6T3 665 aaPredicted RBP12.08□□□□□ -0.48
LINC01550-203ENST00000512901 VPS54Q9P1Q0 977 aa12.08□□□□□ -0.48
LINC01550-203ENST00000512901 PTPRFP10586 1907 aa12.08□□□□□ -0.48
LINC01550-203ENST00000512901 CXCL11O14625 94 aa12.08□□□□□ -0.48
LINC01550-203ENST00000512901 TOMM70O94826 608 aa12.08□□□□□ -0.48
LINC01550-203ENST00000512901 BRD1O95696 1058 aa12.08□□□□□ -0.48
LINC01550-203ENST00000512901 HUNKP57058 714 aa12.08□□□□□ -0.48
LINC01550-203ENST00000512901 SH3D19Q5HYK7 790 aa12.08□□□□□ -0.48
LINC01550-203ENST00000512901 MCTP1Q6DN14 999 aa12.08□□□□□ -0.48
LINC01550-203ENST00000512901 GADL1Q6ZQY3 521 aa12.08□□□□□ -0.48
LINC01550-203ENST00000512901 FBXO18Q8NFZ0 1043 aa12.08□□□□□ -0.48
LINC01550-203ENST00000512901 GPKOWQ92917 476 aaPredicted RBP eCLIP12.08□□□□□ -0.48
LINC01550-203ENST00000512901 GJB4Q9NTQ9 266 aa12.08□□□□□ -0.48
LINC01550-203ENST00000512901 PRR12Q9ULL5 1215 aa12.08□□□□□ -0.48
LINC01550-203ENST00000512901 PASKQ96RG2 1323 aa12.07□□□□□ -0.48
LINC01550-203ENST00000512901 PNMA6FA0A0J9YX94 578 aa12.07□□□□□ -0.48
LINC01550-203ENST00000512901 ZBTB5O15062 677 aa12.07□□□□□ -0.48
LINC01550-203ENST00000512901 FLOT1O75955 427 aa12.07□□□□□ -0.48
LINC01550-203ENST00000512901 CDC37Q16543 378 aaPredicted RBP12.07□□□□□ -0.48
LINC01550-203ENST00000512901 KRT40Q6A162 431 aa12.07□□□□□ -0.48
LINC01550-203ENST00000512901 SLF1Q9BQI6 1058 aa12.07□□□□□ -0.48
LINC01550-203ENST00000512901 FBXO28Q9NVF7 368 aa12.07□□□□□ -0.48
LINC01550-203ENST00000512901 ZDHHC9Q9Y397 364 aa12.07□□□□□ -0.48
LINC01550-203ENST00000512901 A0A0G2JLL6 359 aaPredicted RBP12.06□□□□□ -0.48
LINC01550-203ENST00000512901 PLA2G6O60733 806 aa12.06□□□□□ -0.48
LINC01550-203ENST00000512901 GNL2Q13823 731 aaKnown RBP12.06□□□□□ -0.48
LINC01550-203ENST00000512901 SAFBQ15424 915 aaKnown RBP eCLIP12.06□□□□□ -0.48
LINC01550-203ENST00000512901 WWC2Q6AWC2 1192 aa12.06□□□□□ -0.48
LINC01550-203ENST00000512901 PRRT2Q7Z6L0 340 aaPredicted RBP12.06□□□□□ -0.48
LINC01550-203ENST00000512901 FERMT3Q86UX7 667 aa12.06□□□□□ -0.48
LINC01550-203ENST00000512901 CCDC148Q8NFR7 591 aa12.06□□□□□ -0.48
LINC01550-203ENST00000512901 KCNJ14Q9UNX9 436 aa12.06□□□□□ -0.48
LINC01550-203ENST00000512901 KCNH4Q9UQ05 1017 aa12.06□□□□□ -0.48
LINC01550-203ENST00000512901 hCG_1984214I3L0E3 225 aa12.06□□□□□ -0.48
LINC01550-203ENST00000512901 F13A1P00488 732 aa12.06□□□□□ -0.48
LINC01550-203ENST00000512901 NAPAP54920 295 aa12.06□□□□□ -0.48
LINC01550-203ENST00000512901 NLRP5P59047 1200 aa12.06□□□□□ -0.48
LINC01550-203ENST00000512901 SNAP25P60880 206 aa12.06□□□□□ -0.48
LINC01550-203ENST00000512901 SNAPC2Q13487 334 aa12.06□□□□□ -0.48
LINC01550-203ENST00000512901 QRICH1Q2TAL8 776 aa12.06□□□□□ -0.48
LINC01550-203ENST00000512901 ZNF713Q8N859 430 aaPredicted RBP12.06□□□□□ -0.48
LINC01550-203ENST00000512901 PRPF38AQ8NAV1 312 aaKnown RBP12.06□□□□□ -0.48
LINC01550-203ENST00000512901 ZNF784Q8NCA9 323 aaPredicted RBP12.06□□□□□ -0.48
LINC01550-203ENST00000512901 RGS22Q8NE09 1264 aa12.06□□□□□ -0.48
LINC01550-203ENST00000512901 CCDC12Q8WUD4 166 aaPredicted RBP12.06□□□□□ -0.48
LINC01550-203ENST00000512901 WNK4Q96J92 1243 aa12.06□□□□□ -0.48
LINC01550-203ENST00000512901 BARHL2Q9NY43 387 aa12.06□□□□□ -0.48
LINC01550-203ENST00000512901 CTDP1Q9Y5B0 961 aaPredicted RBP12.06□□□□□ -0.48
LINC01550-203ENST00000512901 USP17L15C9J2P7 530 aa12.05□□□□□ -0.48
LINC01550-203ENST00000512901 USP17L13C9JLJ4 530 aa12.05□□□□□ -0.48
LINC01550-203ENST00000512901 USP17L11C9JVI0 530 aa12.05□□□□□ -0.48
LINC01550-203ENST00000512901 USP17L18D6R9N7 530 aa12.05□□□□□ -0.48
LINC01550-203ENST00000512901 USP17L22D6RA61 530 aa12.05□□□□□ -0.48
LINC01550-203ENST00000512901 USP17L17D6RBQ6 530 aa12.05□□□□□ -0.48
LINC01550-203ENST00000512901 USP17L19D6RCP7 530 aa12.05□□□□□ -0.48
LINC01550-203ENST00000512901 USP17L20D6RJB6 530 aa12.05□□□□□ -0.48
LINC01550-203ENST00000512901 USP17L24Q0WX57 530 aa12.05□□□□□ -0.48
LINC01550-203ENST00000512901 MKRN3Q13064 507 aaKnown RBP12.05□□□□□ -0.48
LINC01550-203ENST00000512901 PROCA1Q8NCQ7 364 aaPredicted RBP12.05□□□□□ -0.48
LINC01550-203ENST00000512901 MTMR8Q96EF0 704 aa12.05□□□□□ -0.48
LINC01550-203ENST00000512901 BRMS1Q9HCU9 246 aa12.05□□□□□ -0.48
LINC01550-203ENST00000512901 SH3GLB2Q9NR46 395 aa12.05□□□□□ -0.48
LINC01550-203ENST00000512901 LOC285556D6RIA3 1793 aa12.05□□□□□ -0.48
LINC01550-203ENST00000512901 MMP1P03956 469 aa12.05□□□□□ -0.48
LINC01550-203ENST00000512901 GJA5P36382 358 aa12.05□□□□□ -0.48
LINC01550-203ENST00000512901 ZNF157P51786 506 aaPredicted RBP12.05□□□□□ -0.48
LINC01550-203ENST00000512901 CCDC174Q6PII3 467 aa12.05□□□□□ -0.48
LINC01550-203ENST00000512901 FASTKD5Q7L8L6 764 aaKnown RBP12.05□□□□□ -0.48
LINC01550-203ENST00000512901 TNPO1Q92973 898 aaKnown RBP12.05□□□□□ -0.48
LINC01550-203ENST00000512901 COA7Q96BR5 231 aa12.05□□□□□ -0.48
LINC01550-203ENST00000512901 AMNQ9BXJ7 453 aa12.05□□□□□ -0.48
LINC01550-203ENST00000512901 PPP1R9AQ9ULJ8 1098 aa12.05□□□□□ -0.48
LINC01550-203ENST00000512901 ATP6V1DQ9Y5K8 247 aa12.05□□□□□ -0.48
LINC01550-203ENST00000512901 STXBP3O00186 592 aa12.04□□□□□ -0.48
LINC01550-203ENST00000512901 CALML3P27482 149 aa12.04□□□□□ -0.48
LINC01550-203ENST00000512901 TREML2Q5T2D2 321 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms