RNA–Protein interactions for RNA: ENST00000510884.5

NUP54-210, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-210ENST00000510884 ZBTB7CA1YPR0 619 aa8.88□□□□□ -0.99
NUP54-210ENST00000510884 FKTNO75072 461 aa8.88□□□□□ -0.99
NUP54-210ENST00000510884 ACRP10323 421 aa8.88□□□□□ -0.99
NUP54-210ENST00000510884 ENDOUP21128 410 aaKnown RBP8.88□□□□□ -0.99
NUP54-210ENST00000510884 LINC00310P59036 64 aa8.88□□□□□ -0.99
NUP54-210ENST00000510884 ZNF605Q86T29 641 aa8.88□□□□□ -0.99
NUP54-210ENST00000510884 AMIGO3Q86WK7 504 aa8.88□□□□□ -0.99
NUP54-210ENST00000510884 KRTAP4-7Q9BYR0 210 aa8.88□□□□□ -0.99
NUP54-210ENST00000510884 MINPP1Q9UNW1 487 aa8.88□□□□□ -0.99
NUP54-210ENST00000510884 TEX51A0A1B0GUA7 166 aa8.87□□□□□ -0.99
NUP54-210ENST00000510884 HRKO00198 91 aa8.87□□□□□ -0.99
NUP54-210ENST00000510884 ZNF205O95201 554 aa8.87□□□□□ -0.99
NUP54-210ENST00000510884 ZSCAN22P10073 491 aaPredicted RBP8.87□□□□□ -0.99
NUP54-210ENST00000510884 BMP8BP34820 402 aa8.87□□□□□ -0.99
NUP54-210ENST00000510884 PDE6BP35913 854 aa8.87□□□□□ -0.99
NUP54-210ENST00000510884 CTSKP43235 329 aa8.87□□□□□ -0.99
NUP54-210ENST00000510884 GALK1P51570 392 aa8.87□□□□□ -0.99
NUP54-210ENST00000510884 DLG4P78352 724 aa8.87□□□□□ -0.99
NUP54-210ENST00000510884 AUHQ13825 339 aaKnown RBP8.87□□□□□ -0.99
NUP54-210ENST00000510884 ZNF394Q53GI3 561 aa8.87□□□□□ -0.99
NUP54-210ENST00000510884 ZPBP2Q6X784 338 aa8.87□□□□□ -0.99
NUP54-210ENST00000510884 CEP128Q6ZU80 1094 aa8.87□□□□□ -0.99
NUP54-210ENST00000510884 SHOXO15266 292 aa8.86□□□□□ -0.99
NUP54-210ENST00000510884 MFAP1P55081 439 aaKnown RBP8.86□□□□□ -0.99
NUP54-210ENST00000510884 DHRS1Q96LJ7 313 aa8.86□□□□□ -0.99
NUP54-210ENST00000510884 GFOD1Q9NXC2 390 aa8.86□□□□□ -0.99
NUP54-210ENST00000510884 TNFRSF10DQ9UBN6 386 aa8.86□□□□□ -0.99
NUP54-210ENST00000510884 PCDHGB7Q9Y5F8 929 aa8.86□□□□□ -0.99
NUP54-210ENST00000510884 OR14I1A6ND48 311 aa8.85□□□□□ -0.99
NUP54-210ENST00000510884 FADS2P1A8MWK0 482 aa8.85□□□□□ -0.99
NUP54-210ENST00000510884 PMS1P54277 932 aaKnown RBP8.85□□□□□ -0.99
NUP54-210ENST00000510884 SLC14A2Q15849 920 aa8.85□□□□□ -0.99
NUP54-210ENST00000510884 CIAPIN1Q6FI81 312 aa8.85□□□□□ -0.99
NUP54-210ENST00000510884 RBBP8NLQ8NC74 664 aaPredicted RBP8.85□□□□□ -0.99
NUP54-210ENST00000510884 TM9SF2Q99805 663 aa8.85□□□□□ -0.99
NUP54-210ENST00000510884 GCM1Q9NP62 436 aa8.85□□□□□ -0.99
NUP54-210ENST00000510884 C9IYK1 514 aa8.84□□□□□ -0.99
NUP54-210ENST00000510884 VAMP1P23763 118 aa8.84□□□□□ -0.99
NUP54-210ENST00000510884 CEBPAP49715 358 aaPredicted RBP8.84□□□□□ -0.99
NUP54-210ENST00000510884 RTP1P59025 263 aa8.84□□□□□ -0.99
NUP54-210ENST00000510884 ADGRF1Q5T601 910 aa8.84□□□□□ -0.99
NUP54-210ENST00000510884 C7orf61Q8IZ16 206 aa8.84□□□□□ -0.99
NUP54-210ENST00000510884 RNF34Q969K3 372 aa8.84□□□□□ -0.99
NUP54-210ENST00000510884 PLCD4Q9BRC7 762 aa8.84□□□□□ -0.99
NUP54-210ENST00000510884 ERVK13-1Q9NX77 482 aa8.84□□□□□ -0.99
NUP54-210ENST00000510884 DDX41Q9UJV9 622 aaKnown RBP8.84□□□□□ -0.99
NUP54-210ENST00000510884 FBXL21Q9UKT6 434 aa8.84□□□□□ -0.99
NUP54-210ENST00000510884 RECKO95980 971 aa8.83□□□□□ -1
NUP54-210ENST00000510884 PNLIPP16233 465 aa8.83□□□□□ -1
NUP54-210ENST00000510884 RACK1P63244 317 aaKnown RBP8.83□□□□□ -1
NUP54-210ENST00000510884 CRTC3Q6UUV7 619 aa8.83□□□□□ -1
NUP54-210ENST00000510884 SLCO6A1Q86UG4 719 aa8.83□□□□□ -1
NUP54-210ENST00000510884 SMARCC1Q92922 1105 aaPredicted RBP8.83□□□□□ -1
NUP54-210ENST00000510884 FERD3LQ96RJ6 166 aa8.83□□□□□ -1
NUP54-210ENST00000510884 GPR55Q9Y2T6 319 aaPredicted RBP8.83□□□□□ -1
NUP54-210ENST00000510884 MEIS1O00470 390 aa8.82□□□□□ -1
NUP54-210ENST00000510884 GSNP06396 782 aa8.82□□□□□ -1
NUP54-210ENST00000510884 VAV1P15498 845 aa8.82□□□□□ -1
NUP54-210ENST00000510884 HSF5Q4G112 596 aaPredicted RBP8.82□□□□□ -1
NUP54-210ENST00000510884 PPFIBP1Q86W92 1011 aa8.82□□□□□ -1
NUP54-210ENST00000510884 SIRT2Q8IXJ6 389 aa8.82□□□□□ -1
NUP54-210ENST00000510884 NUAK1O60285 661 aa8.81□□□□□ -1
NUP54-210ENST00000510884 ERVFRD-1P60508 538 aa8.81□□□□□ -1
NUP54-210ENST00000510884 ANKRD39Q53RE8 183 aa8.81□□□□□ -1
NUP54-210ENST00000510884 GALNT18Q6P9A2 607 aa8.81□□□□□ -1
NUP54-210ENST00000510884 CCDC144CPQ8IYA2 1237 aa8.81□□□□□ -1
NUP54-210ENST00000510884 PPT2Q9UMR5 302 aa8.81□□□□□ -1
NUP54-210ENST00000510884 FAM86C2PA6NEL3 165 aa8.8□□□□□ -1
NUP54-210ENST00000510884 WTIPA6NIX2 430 aaPredicted RBP8.8□□□□□ -1
NUP54-210ENST00000510884 GUCY2CP25092 1073 aa8.8□□□□□ -1
NUP54-210ENST00000510884 YBX1P67809 324 aaKnown RBP8.8□□□□□ -1
NUP54-210ENST00000510884 RTP2Q5QGT7 225 aa8.8□□□□□ -1
NUP54-210ENST00000510884 TDRD10Q5VZ19 366 aaKnown RBP8.8□□□□□ -1
NUP54-210ENST00000510884 CDADC1Q9BWV3 514 aa8.8□□□□□ -1
NUP54-210ENST00000510884 MBD1Q9UIS9 605 aaPredicted RBP8.8□□□□□ -1
NUP54-210ENST00000510884 TAF6LQ9Y6J9 622 aa8.8□□□□□ -1
NUP54-210ENST00000510884 A0A1W2PQ45 241 aaPredicted RBP8.79□□□□□ -1
NUP54-210ENST00000510884 A0A1W2PQY0 241 aa8.79□□□□□ -1
NUP54-210ENST00000510884 SCAMP3O14828 347 aaKnown RBP8.79□□□□□ -1
NUP54-210ENST00000510884 COL9A2Q14055 689 aaPredicted RBP8.79□□□□□ -1
NUP54-210ENST00000510884 ZYXQ15942 572 aaKnown RBP8.79□□□□□ -1
NUP54-210ENST00000510884 TMEM132EQ6IEE7 984 aa8.79□□□□□ -1
NUP54-210ENST00000510884 LSRQ86X29 649 aaPredicted RBP8.79□□□□□ -1
NUP54-210ENST00000510884 DSCC1Q9BVC3 393 aa8.79□□□□□ -1
NUP54-210ENST00000510884 SGPP1Q9BX95 441 aa8.79□□□□□ -1
NUP54-210ENST00000510884 RAPGEFL1Q9UHV5 662 aa8.79□□□□□ -1
NUP54-210ENST00000510884 AXDND1Q5T1B0 1012 aaPredicted RBP8.78□□□□□ -1
NUP54-210ENST00000510884 DCAF15Q66K64 600 aa8.78□□□□□ -1
NUP54-210ENST00000510884 UNC5AQ6ZN44 842 aa8.78□□□□□ -1
NUP54-210ENST00000510884 METTL16Q86W50 562 aaKnown RBP8.78□□□□□ -1
NUP54-210ENST00000510884 SRRTQ9BXP5 876 aaKnown RBP8.78□□□□□ -1
NUP54-210ENST00000510884 AP5S1Q9NUS5 200 aa8.78□□□□□ -1
NUP54-210ENST00000510884 VIPR1P32241 457 aa8.77□□□□□ -1.01
NUP54-210ENST00000510884 LAPTM5Q13571 262 aa8.77□□□□□ -1.01
NUP54-210ENST00000510884 KIR3DS1Q14943 382 aa8.77□□□□□ -1.01
NUP54-210ENST00000510884 TTLL10Q6ZVT0 673 aa8.77□□□□□ -1.01
NUP54-210ENST00000510884 ZNF654Q8IZM8 581 aa8.77□□□□□ -1.01
NUP54-210ENST00000510884 TMEM52Q8NDY8 209 aa8.77□□□□□ -1.01
NUP54-210ENST00000510884 SLC12A9Q9BXP2 914 aa8.77□□□□□ -1.01
NUP54-210ENST00000510884 IRF2BPLQ9H1B7 796 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms