RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 EIF4G1Q04637 1599 aaKnown RBP10.54□□□□□ -0.72
TRAPPC11-206ENST00000509857 LARP1BQ659C4 914 aaKnown RBP10.54□□□□□ -0.72
TRAPPC11-206ENST00000509857 C6orf15Q6UXA7 325 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC11-206ENST00000509857 MICAL1Q8TDZ2 1067 aa10.54□□□□□ -0.72
TRAPPC11-206ENST00000509857 GBP3Q9H0R5 595 aa10.54□□□□□ -0.72
TRAPPC11-206ENST00000509857 ANKRD34BA5PLL1 514 aa10.53□□□□□ -0.72
TRAPPC11-206ENST00000509857 GSNP06396 782 aa10.53□□□□□ -0.72
TRAPPC11-206ENST00000509857 BMP8BP34820 402 aa10.53□□□□□ -0.72
TRAPPC11-206ENST00000509857 PCBP3P57721 371 aaKnown RBP10.53□□□□□ -0.72
TRAPPC11-206ENST00000509857 RAB33AQ14088 237 aa10.53□□□□□ -0.72
TRAPPC11-206ENST00000509857 CELF2-AS1Q8N7Q2 184 aa10.53□□□□□ -0.72
TRAPPC11-206ENST00000509857 ZNF513Q8N8E2 541 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC11-206ENST00000509857 LRRN4CLQ8ND94 238 aa10.53□□□□□ -0.72
TRAPPC11-206ENST00000509857 RBL2Q08999 1139 aa10.52□□□□□ -0.73
TRAPPC11-206ENST00000509857 NOL9Q5SY16 702 aaKnown RBP10.52□□□□□ -0.73
TRAPPC11-206ENST00000509857 NBPF6Q5VWK0 638 aa10.52□□□□□ -0.73
TRAPPC11-206ENST00000509857 CKAP2LQ8IYA6 745 aa10.52□□□□□ -0.73
TRAPPC11-206ENST00000509857 CCDC120Q96HB5 630 aa10.52□□□□□ -0.73
TRAPPC11-206ENST00000509857 NBPF4Q96M43 638 aa10.52□□□□□ -0.73
TRAPPC11-206ENST00000509857 DSCC1Q9BVC3 393 aa10.52□□□□□ -0.73
TRAPPC11-206ENST00000509857 RC3H2Q9HBD1 1191 aaKnown RBP10.52□□□□□ -0.73
TRAPPC11-206ENST00000509857 TCFL5Q9UL49 500 aa10.52□□□□□ -0.73
TRAPPC11-206ENST00000509857 R3HCC1Q9Y3T6 440 aaKnown RBP10.52□□□□□ -0.73
TRAPPC11-206ENST00000509857 B2RBV5 119 aa10.51□□□□□ -0.73
TRAPPC11-206ENST00000509857 ZNF205O95201 554 aa10.51□□□□□ -0.73
TRAPPC11-206ENST00000509857 NAT2P11245 290 aa10.51□□□□□ -0.73
TRAPPC11-206ENST00000509857 DDR2Q16832 855 aa10.51□□□□□ -0.73
TRAPPC11-206ENST00000509857 CRTC3Q6UUV7 619 aa10.51□□□□□ -0.73
TRAPPC11-206ENST00000509857 FIBCD1Q8N539 461 aa10.51□□□□□ -0.73
TRAPPC11-206ENST00000509857 BRF1Q92994 677 aa10.51□□□□□ -0.73
TRAPPC11-206ENST00000509857 FOXP3Q9BZS1 431 aa10.51□□□□□ -0.73
TRAPPC11-206ENST00000509857 C19orf73Q9NVV2 129 aa10.51□□□□□ -0.73
TRAPPC11-206ENST00000509857 SLAMF8Q9P0V8 285 aa10.51□□□□□ -0.73
TRAPPC11-206ENST00000509857 DIS3Q9Y2L1 958 aaKnown RBP10.51□□□□□ -0.73
TRAPPC11-206ENST00000509857 DNAJC25-GNG10A0A024R161 153 aa10.5□□□□□ -0.73
TRAPPC11-206ENST00000509857 PPM1BO75688 479 aa10.5□□□□□ -0.73
TRAPPC11-206ENST00000509857 SYPP08247 313 aa10.5□□□□□ -0.73
TRAPPC11-206ENST00000509857 GDNFP39905 211 aa10.5□□□□□ -0.73
TRAPPC11-206ENST00000509857 MRM1Q6IN84 353 aaKnown RBP10.5□□□□□ -0.73
TRAPPC11-206ENST00000509857 FLAD1Q8NFF5 587 aa10.5□□□□□ -0.73
TRAPPC11-206ENST00000509857 RCC1LQ96I51 464 aaKnown RBP10.5□□□□□ -0.73
TRAPPC11-206ENST00000509857 HIRIP3Q9BW71 556 aaPredicted RBP10.5□□□□□ -0.73
TRAPPC11-206ENST00000509857 TMEM59LQ9UK28 342 aa10.5□□□□□ -0.73
TRAPPC11-206ENST00000509857 CTNND2Q9UQB3 1225 aa10.5□□□□□ -0.73
TRAPPC11-206ENST00000509857 TMEM82A0PJX8 343 aa10.49□□□□□ -0.73
TRAPPC11-206ENST00000509857 H0Y8X5 98 aa10.49□□□□□ -0.73
TRAPPC11-206ENST00000509857 MEIS1O00470 390 aa10.49□□□□□ -0.73
TRAPPC11-206ENST00000509857 DDAH1O94760 285 aa10.49□□□□□ -0.73
TRAPPC11-206ENST00000509857 GJB6O95452 261 aa10.49□□□□□ -0.73
TRAPPC11-206ENST00000509857 GTF2F1P35269 517 aaKnown RBP eCLIP10.49□□□□□ -0.73
TRAPPC11-206ENST00000509857 RALGPS1Q5JS13 557 aa10.49□□□□□ -0.73
TRAPPC11-206ENST00000509857 ARHGEF39Q8N4T4 335 aa10.49□□□□□ -0.73
TRAPPC11-206ENST00000509857 DHX38Q92620 1227 aaKnown RBP10.49□□□□□ -0.73
TRAPPC11-206ENST00000509857 FGD4Q96M96 766 aa10.49□□□□□ -0.73
TRAPPC11-206ENST00000509857 SF3B6Q9Y3B4 125 aaKnown RBP10.49□□□□□ -0.73
TRAPPC11-206ENST00000509857 CCDC88BA6NC98 1476 aa10.49□□□□□ -0.73
TRAPPC11-206ENST00000509857 ZGLP1P0C6A0 271 aa10.48□□□□□ -0.73
TRAPPC11-206ENST00000509857 VAV1P15498 845 aa10.48□□□□□ -0.73
TRAPPC11-206ENST00000509857 ITGB5P18084 799 aa10.48□□□□□ -0.73
TRAPPC11-206ENST00000509857 ENDOUP21128 410 aaKnown RBP10.48□□□□□ -0.73
TRAPPC11-206ENST00000509857 IRAK1P51617 712 aa10.48□□□□□ -0.73
TRAPPC11-206ENST00000509857 ATG4DQ86TL0 474 aaPredicted RBP10.48□□□□□ -0.73
TRAPPC11-206ENST00000509857 APBA2Q99767 749 aa10.48□□□□□ -0.73
TRAPPC11-206ENST00000509857 ADAMTS10Q9H324 1103 aa10.48□□□□□ -0.73
TRAPPC11-206ENST00000509857 NOL6Q9H6R4 1146 aaKnown RBP10.48□□□□□ -0.73
TRAPPC11-206ENST00000509857 APEX2Q9UBZ4 518 aa10.48□□□□□ -0.73
TRAPPC11-206ENST00000509857 ATAD2BQ9ULI0 1458 aa10.48□□□□□ -0.73
TRAPPC11-206ENST00000509857 SUSD5O60279 629 aa10.47□□□□□ -0.73
TRAPPC11-206ENST00000509857 ADAT2Q7Z6V5 191 aaKnown RBP10.47□□□□□ -0.73
TRAPPC11-206ENST00000509857 G6PC3Q9BUM1 346 aa10.47□□□□□ -0.73
TRAPPC11-206ENST00000509857 CGGBP1Q9UFW8 167 aaPredicted RBP10.47□□□□□ -0.73
TRAPPC11-206ENST00000509857 SSU72P8A0A1W2PR75 194 aa10.46□□□□□ -0.73
TRAPPC11-206ENST00000509857 GRB10Q13322 594 aa10.46□□□□□ -0.73
TRAPPC11-206ENST00000509857 CWF19L1Q69YN2 538 aaKnown RBP10.46□□□□□ -0.73
TRAPPC11-206ENST00000509857 ADCY4Q8NFM4 1077 aa10.46□□□□□ -0.73
TRAPPC11-206ENST00000509857 LINC01599Q8WXQ3 324 aa10.46□□□□□ -0.73
TRAPPC11-206ENST00000509857 SLC12A9Q9BXP2 914 aa10.46□□□□□ -0.73
TRAPPC11-206ENST00000509857 TRIM55Q9BYV6 548 aa10.46□□□□□ -0.73
TRAPPC11-206ENST00000509857 MSRB2Q9Y3D2 182 aa10.46□□□□□ -0.73
TRAPPC11-206ENST00000509857 DUSP4Q13115 394 aa10.45□□□□□ -0.74
TRAPPC11-206ENST00000509857 RTP2Q5QGT7 225 aa10.45□□□□□ -0.74
TRAPPC11-206ENST00000509857 EEPD1Q7L9B9 569 aa10.45□□□□□ -0.74
TRAPPC11-206ENST00000509857 EPN3Q9H201 632 aa10.45□□□□□ -0.74
TRAPPC11-206ENST00000509857 ST7Q9NRC1 585 aa10.45□□□□□ -0.74
TRAPPC11-206ENST00000509857 SERINC3Q13530 473 aa10.44□□□□□ -0.74
TRAPPC11-206ENST00000509857 WAPLQ7Z5K2 1190 aa10.44□□□□□ -0.74
TRAPPC11-206ENST00000509857 BVESQ8NE79 360 aa10.44□□□□□ -0.74
TRAPPC11-206ENST00000509857 PDZD8Q8NEN9 1154 aa10.44□□□□□ -0.74
TRAPPC11-206ENST00000509857 SYTL4Q96C24 671 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC11-206ENST00000509857 ZDHHC15Q96MV8 337 aa10.44□□□□□ -0.74
TRAPPC11-206ENST00000509857 SP110Q9HB58 689 aa10.44□□□□□ -0.74
TRAPPC11-206ENST00000509857 EMC9Q9Y3B6 208 aa10.44□□□□□ -0.74
TRAPPC11-206ENST00000509857 HMGXB3Q12766 1538 aa10.43□□□□□ -0.74
TRAPPC11-206ENST00000509857 FKTNO75072 461 aa10.43□□□□□ -0.74
TRAPPC11-206ENST00000509857 HPXP02790 462 aa10.43□□□□□ -0.74
TRAPPC11-206ENST00000509857 RPL10P27635 214 aaKnown RBP10.43□□□□□ -0.74
TRAPPC11-206ENST00000509857 POU4F1Q01851 419 aa10.43□□□□□ -0.74
TRAPPC11-206ENST00000509857 PPP2R5DQ14738 602 aa10.43□□□□□ -0.74
TRAPPC11-206ENST00000509857 MAP6Q96JE9 813 aa10.43□□□□□ -0.74
TRAPPC11-206ENST00000509857 FCRL2Q96LA5 508 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms