RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 NANOS3P60323 173 aaKnown RBP5.96□□□□□ -1.46
NIPBL-206ENST00000509429 SPATA32Q96LK8 384 aa5.96□□□□□ -1.46
NIPBL-206ENST00000509429 MSL3P1P0C860 447 aa5.95□□□□□ -1.46
NIPBL-206ENST00000509429 KIR2DL1P43626 348 aaPredicted RBP5.95□□□□□ -1.46
NIPBL-206ENST00000509429 KIR2DL2P43627 348 aaPredicted RBP5.95□□□□□ -1.46
NIPBL-206ENST00000509429 MMP14P50281 582 aa5.95□□□□□ -1.46
NIPBL-206ENST00000509429 FCGRTP55899 365 aa5.95□□□□□ -1.46
NIPBL-206ENST00000509429 ZNF622Q969S3 477 aaKnown RBP eCLIP5.95□□□□□ -1.46
NIPBL-206ENST00000509429 CDK5RAP1Q96SZ6 601 aaKnown RBP5.95□□□□□ -1.46
NIPBL-206ENST00000509429 PRDM14Q9GZV8 571 aa5.95□□□□□ -1.46
NIPBL-206ENST00000509429 MYH16Q9H6N6 1097 aa5.95□□□□□ -1.46
NIPBL-206ENST00000509429 ZCCHC6Q5VYS8 1495 aaKnown RBP5.95□□□□□ -1.46
NIPBL-206ENST00000509429 PATL2C9JE40 543 aaKnown RBP5.94□□□□□ -1.46
NIPBL-206ENST00000509429 SMARCA5O60264 1052 aaPredicted RBP5.94□□□□□ -1.46
NIPBL-206ENST00000509429 PLA2G1BP04054 148 aaKnown RBP5.94□□□□□ -1.46
NIPBL-206ENST00000509429 XRCC5P13010 732 aaKnown RBP5.94□□□□□ -1.46
NIPBL-206ENST00000509429 ETF1P62495 437 aaKnown RBP5.94□□□□□ -1.46
NIPBL-206ENST00000509429 INPP5AQ14642 412 aa5.94□□□□□ -1.46
NIPBL-206ENST00000509429 RAB3GAP1Q15042 981 aa5.94□□□□□ -1.46
NIPBL-206ENST00000509429 CSRP2Q16527 193 aa5.94□□□□□ -1.46
NIPBL-206ENST00000509429 SCARA3Q6AZY7 606 aa5.94□□□□□ -1.46
NIPBL-206ENST00000509429 KRTAP5-11Q6L8G4 156 aa5.94□□□□□ -1.46
NIPBL-206ENST00000509429 CEP128Q6ZU80 1094 aa5.94□□□□□ -1.46
NIPBL-206ENST00000509429 DTWD2Q8NBA8 298 aa5.94□□□□□ -1.46
NIPBL-206ENST00000509429 CHFRQ96EP1 664 aa5.94□□□□□ -1.46
NIPBL-206ENST00000509429 IGSF5Q9NSI5 407 aa5.94□□□□□ -1.46
NIPBL-206ENST00000509429 KCNH3Q9ULD8 1083 aa5.94□□□□□ -1.46
NIPBL-206ENST00000509429 KRTAP29-1A8MX34 341 aaPredicted RBP5.93□□□□□ -1.46
NIPBL-206ENST00000509429 BMP6P22004 513 aa5.93□□□□□ -1.46
NIPBL-206ENST00000509429 LRFN4Q6PJG9 635 aa5.93□□□□□ -1.46
NIPBL-206ENST00000509429 CARFQ8N187 725 aa5.93□□□□□ -1.46
NIPBL-206ENST00000509429 CCDC74AQ96AQ1 378 aa5.93□□□□□ -1.46
NIPBL-206ENST00000509429 SSBP3Q9BWW4 388 aaPredicted RBP5.93□□□□□ -1.46
NIPBL-206ENST00000509429 TPD52L2O43399 206 aaKnown RBP5.92□□□□□ -1.46
NIPBL-206ENST00000509429 GORABQ5T7V8 394 aa5.92□□□□□ -1.46
NIPBL-206ENST00000509429 FAM9BQ8IZU0 186 aa5.92□□□□□ -1.46
NIPBL-206ENST00000509429 PPP4R2Q9NY27 417 aa5.92□□□□□ -1.46
NIPBL-206ENST00000509429 SAMM50Q9Y512 469 aa5.92□□□□□ -1.46
NIPBL-206ENST00000509429 MARCH6O60337 910 aa5.91□□□□□ -1.46
NIPBL-206ENST00000509429 ARL4AP40617 200 aa5.91□□□□□ -1.46
NIPBL-206ENST00000509429 MVKQ03426 396 aa5.91□□□□□ -1.46
NIPBL-206ENST00000509429 CBX2Q14781 532 aaPredicted RBP5.91□□□□□ -1.46
NIPBL-206ENST00000509429 HDXQ7Z353 690 aa5.91□□□□□ -1.46
NIPBL-206ENST00000509429 RETREG2Q8NC44 543 aa5.91□□□□□ -1.46
NIPBL-206ENST00000509429 PMF1-BGLAPU3KQ54 211 aa5.91□□□□□ -1.46
NIPBL-206ENST00000509429 HTRA3P83110 453 aa5.9□□□□□ -1.46
NIPBL-206ENST00000509429 FOXO4P98177 505 aa5.9□□□□□ -1.46
NIPBL-206ENST00000509429 ORC1Q13415 861 aa5.9□□□□□ -1.46
NIPBL-206ENST00000509429 CNGB1Q14028 1251 aaPredicted RBP5.9□□□□□ -1.46
NIPBL-206ENST00000509429 TARBP2Q15633 366 aaKnown RBP5.9□□□□□ -1.46
NIPBL-206ENST00000509429 LLGL2Q6P1M3 1020 aa5.9□□□□□ -1.46
NIPBL-206ENST00000509429 MAP6Q96JE9 813 aa5.9□□□□□ -1.46
NIPBL-206ENST00000509429 TERF2IPQ9NYB0 399 aa5.9□□□□□ -1.46
NIPBL-206ENST00000509429 ZMYM5Q9UJ78 669 aa5.9□□□□□ -1.46
NIPBL-206ENST00000509429 SUGT1Q9Y2Z0 365 aa5.9□□□□□ -1.46
NIPBL-206ENST00000509429 DLX2Q07687 328 aaPredicted RBP5.89□□□□□ -1.47
NIPBL-206ENST00000509429 AXDND1Q5T1B0 1012 aaPredicted RBP5.89□□□□□ -1.47
NIPBL-206ENST00000509429 NME8Q8N427 588 aa5.89□□□□□ -1.47
NIPBL-206ENST00000509429 DNAJB8Q8NHS0 232 aa5.89□□□□□ -1.47
NIPBL-206ENST00000509429 CLUAP1Q96AJ1 413 aa5.89□□□□□ -1.47
NIPBL-206ENST00000509429 PLPPR2Q96GM1 343 aa5.89□□□□□ -1.47
NIPBL-206ENST00000509429 CEP89Q96ST8 783 aa5.89□□□□□ -1.47
NIPBL-206ENST00000509429 KLC2Q9H0B6 622 aa5.89□□□□□ -1.47
NIPBL-206ENST00000509429 NUDT19A8MXV4 375 aa5.88□□□□□ -1.47
NIPBL-206ENST00000509429 PPFIA2O75334 1257 aa5.88□□□□□ -1.47
NIPBL-206ENST00000509429 ERCC3P19447 782 aa5.88□□□□□ -1.47
NIPBL-206ENST00000509429 RPL10P27635 214 aaKnown RBP5.88□□□□□ -1.47
NIPBL-206ENST00000509429 LAPTM5Q13571 262 aa5.88□□□□□ -1.47
NIPBL-206ENST00000509429 LRRC14Q15048 493 aa5.88□□□□□ -1.47
NIPBL-206ENST00000509429 RALBP1Q15311 655 aa5.88□□□□□ -1.47
NIPBL-206ENST00000509429 GLB1LQ6UWU2 654 aa5.88□□□□□ -1.47
NIPBL-206ENST00000509429 TSHZ1Q6ZSZ6 1077 aa5.88□□□□□ -1.47
NIPBL-206ENST00000509429 SCUBE1Q8IWY4 988 aa5.88□□□□□ -1.47
NIPBL-206ENST00000509429 DNAJC10Q8IXB1 793 aa5.88□□□□□ -1.47
NIPBL-206ENST00000509429 AKAP2Q9Y2D5 859 aa5.88□□□□□ -1.47
NIPBL-206ENST00000509429 TTC36A6NLP5 189 aa5.87□□□□□ -1.47
NIPBL-206ENST00000509429 ATG7O95352 703 aa5.87□□□□□ -1.47
NIPBL-206ENST00000509429 KRTAP10-7P60409 375 aaPredicted RBP5.87□□□□□ -1.47
NIPBL-206ENST00000509429 MYBPC2Q14324 1141 aa5.87□□□□□ -1.47
NIPBL-206ENST00000509429 RINLQ6ZS11 566 aa5.87□□□□□ -1.47
NIPBL-206ENST00000509429 APBB1IPQ7Z5R6 666 aaPredicted RBP5.87□□□□□ -1.47
NIPBL-206ENST00000509429 VOPP1Q96AW1 172 aa5.87□□□□□ -1.47
NIPBL-206ENST00000509429 CEP131Q9UPN4 1083 aa5.87□□□□□ -1.47
NIPBL-206ENST00000509429 RBM47A0AV96 593 aaKnown RBP5.86□□□□□ -1.47
NIPBL-206ENST00000509429 ANKRD62A6NC57 917 aa5.86□□□□□ -1.47
NIPBL-206ENST00000509429 UNCXA6NJT0 531 aa5.86□□□□□ -1.47
NIPBL-206ENST00000509429 RTP1P59025 263 aa5.86□□□□□ -1.47
NIPBL-206ENST00000509429 ZNF200P98182 395 aaPredicted RBP5.86□□□□□ -1.47
NIPBL-206ENST00000509429 RPTNQ6XPR3 784 aa5.86□□□□□ -1.47
NIPBL-206ENST00000509429 HHIPL1Q96JK4 782 aa5.86□□□□□ -1.47
NIPBL-206ENST00000509429 CASC1Q6TDU7 716 aa5.85□□□□□ -1.47
NIPBL-206ENST00000509429 RNF111Q6ZNA4 994 aa5.85□□□□□ -1.47
NIPBL-206ENST00000509429 WAPLQ7Z5K2 1190 aa5.85□□□□□ -1.47
NIPBL-206ENST00000509429 ZNF761Q86XN6 746 aaPredicted RBP5.85□□□□□ -1.47
NIPBL-206ENST00000509429 MICAL1Q8TDZ2 1067 aa5.85□□□□□ -1.47
NIPBL-206ENST00000509429 DPH2Q9BQC3 489 aaPredicted RBP5.85□□□□□ -1.47
NIPBL-206ENST00000509429 HIRIP3Q9BW71 556 aaPredicted RBP5.85□□□□□ -1.47
NIPBL-206ENST00000509429 SNCAIPQ9Y6H5 919 aa5.85□□□□□ -1.47
NIPBL-206ENST00000509429 HMGB1P1B2RPK0 211 aaPredicted RBP5.84□□□□□ -1.47
NIPBL-206ENST00000509429 GRK4P32298 578 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms