RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 FAM161BQ96MY7 647 aa4.28□□□□□ -1.72
DEPDC1B-204ENST00000509006 GPR20Q99678 358 aa4.28□□□□□ -1.72
DEPDC1B-204ENST00000509006 KLHL3Q9UH77 587 aa4.28□□□□□ -1.72
DEPDC1B-204ENST00000509006 TCFL5Q9UL49 500 aa4.28□□□□□ -1.72
DEPDC1B-204ENST00000509006 MYRFQ9Y2G1 1151 aa4.28□□□□□ -1.72
DEPDC1B-204ENST00000509006 NUDT19A8MXV4 375 aa4.27□□□□□ -1.73
DEPDC1B-204ENST00000509006 K7ESM1 405 aa4.27□□□□□ -1.73
DEPDC1B-204ENST00000509006 ABLIM1O14639 778 aa4.27□□□□□ -1.73
DEPDC1B-204ENST00000509006 SUV39H1O43463 412 aa4.27□□□□□ -1.73
DEPDC1B-204ENST00000509006 BUB1BO60566 1050 aaPredicted RBP4.27□□□□□ -1.73
DEPDC1B-204ENST00000509006 HTR3BO95264 441 aa4.27□□□□□ -1.73
DEPDC1B-204ENST00000509006 BPNT1O95861 308 aa4.27□□□□□ -1.73
DEPDC1B-204ENST00000509006 LIMS1P48059 325 aa4.27□□□□□ -1.73
DEPDC1B-204ENST00000509006 KCNC1P48547 511 aa4.27□□□□□ -1.73
DEPDC1B-204ENST00000509006 SLURP1P55000 103 aa4.27□□□□□ -1.73
DEPDC1B-204ENST00000509006 RTP1P59025 263 aa4.27□□□□□ -1.73
DEPDC1B-204ENST00000509006 RAB3GAP1Q15042 981 aa4.27□□□□□ -1.73
DEPDC1B-204ENST00000509006 BBS9Q3SYG4 887 aa4.27□□□□□ -1.73
DEPDC1B-204ENST00000509006 SYTL5Q8TDW5 730 aaPredicted RBP4.27□□□□□ -1.73
DEPDC1B-204ENST00000509006 TCTN2Q96GX1 697 aa4.27□□□□□ -1.73
DEPDC1B-204ENST00000509006 CCDC74BQ96LY2 380 aa4.27□□□□□ -1.73
DEPDC1B-204ENST00000509006 TMEM74Q96NL1 305 aa4.27□□□□□ -1.73
DEPDC1B-204ENST00000509006 RSRP1Q9BUV0 290 aa4.27□□□□□ -1.73
DEPDC1B-204ENST00000509006 ASCC2Q9H1I8 757 aaPredicted RBP4.27□□□□□ -1.73
DEPDC1B-204ENST00000509006 GPR55Q9Y2T6 319 aaPredicted RBP4.27□□□□□ -1.73
DEPDC1B-204ENST00000509006 GRIN3BO60391 1043 aa4.26□□□□□ -1.73
DEPDC1B-204ENST00000509006 MPOP05164 745 aa4.26□□□□□ -1.73
DEPDC1B-204ENST00000509006 TNFRSF1AP19438 455 aa4.26□□□□□ -1.73
DEPDC1B-204ENST00000509006 PCBP3P57721 371 aaKnown RBP4.26□□□□□ -1.73
DEPDC1B-204ENST00000509006 HSF5Q4G112 596 aaPredicted RBP4.26□□□□□ -1.73
DEPDC1B-204ENST00000509006 REC114Q7Z4M0 266 aa4.26□□□□□ -1.73
DEPDC1B-204ENST00000509006 TMC3Q7Z5M5 1100 aa4.26□□□□□ -1.73
DEPDC1B-204ENST00000509006 PHACTR4Q8IZ21 702 aa4.26□□□□□ -1.73
DEPDC1B-204ENST00000509006 ADGRG2Q8IZP9 1017 aa4.26□□□□□ -1.73
DEPDC1B-204ENST00000509006 KIF2CQ99661 725 aa4.26□□□□□ -1.73
DEPDC1B-204ENST00000509006 TAF6LQ9Y6J9 622 aa4.26□□□□□ -1.73
DEPDC1B-204ENST00000509006 SSU72P8A0A1W2PR75 194 aa4.25□□□□□ -1.73
DEPDC1B-204ENST00000509006 RGS13O14921 159 aa4.25□□□□□ -1.73
DEPDC1B-204ENST00000509006 SYPP08247 313 aa4.25□□□□□ -1.73
DEPDC1B-204ENST00000509006 ZXDAP98168 799 aa4.25□□□□□ -1.73
DEPDC1B-204ENST00000509006 SNW1Q13573 536 aaKnown RBP4.25□□□□□ -1.73
DEPDC1B-204ENST00000509006 MPP2Q14168 576 aa4.25□□□□□ -1.73
DEPDC1B-204ENST00000509006 ZNF827Q17R98 1081 aa4.25□□□□□ -1.73
DEPDC1B-204ENST00000509006 UBXN11Q5T124 520 aa4.25□□□□□ -1.73
DEPDC1B-204ENST00000509006 FERMT3Q86UX7 667 aa4.25□□□□□ -1.73
DEPDC1B-204ENST00000509006 DAGLBQ8NCG7 672 aa4.25□□□□□ -1.73
DEPDC1B-204ENST00000509006 FBXO27Q8NI29 283 aa4.25□□□□□ -1.73
DEPDC1B-204ENST00000509006 ENOX1Q8TC92 643 aaKnown RBP4.25□□□□□ -1.73
DEPDC1B-204ENST00000509006 KCNQ5Q9NR82 932 aa4.25□□□□□ -1.73
DEPDC1B-204ENST00000509006 A0A1B0GTL3 188 aa4.24□□□□□ -1.73
DEPDC1B-204ENST00000509006 FADS2P1A8MWK0 482 aa4.24□□□□□ -1.73
DEPDC1B-204ENST00000509006 UBOX5O94941 541 aa4.24□□□□□ -1.73
DEPDC1B-204ENST00000509006 IGFBP6P24592 240 aaPredicted RBP4.24□□□□□ -1.73
DEPDC1B-204ENST00000509006 GBP2P32456 591 aaPredicted RBP4.24□□□□□ -1.73
DEPDC1B-204ENST00000509006 ARL4AP40617 200 aa4.24□□□□□ -1.73
DEPDC1B-204ENST00000509006 RANGAP1P46060 587 aaPredicted RBP4.24□□□□□ -1.73
DEPDC1B-204ENST00000509006 XPCQ01831 940 aaPredicted RBP4.24□□□□□ -1.73
DEPDC1B-204ENST00000509006 TAGLNQ01995 201 aaKnown RBP4.24□□□□□ -1.73
DEPDC1B-204ENST00000509006 FAM160A1Q05DH4 1040 aa4.24□□□□□ -1.73
DEPDC1B-204ENST00000509006 PLEKHN1Q494U1 663 aaPredicted RBP4.24□□□□□ -1.73
DEPDC1B-204ENST00000509006 VWA3BQ502W6 1294 aa4.24□□□□□ -1.73
DEPDC1B-204ENST00000509006 ZFYVE27Q5T4F4 411 aa4.24□□□□□ -1.73
DEPDC1B-204ENST00000509006 NT5DC1Q5TFE4 455 aa4.24□□□□□ -1.73
DEPDC1B-204ENST00000509006 GALNT18Q6P9A2 607 aa4.24□□□□□ -1.73
DEPDC1B-204ENST00000509006 RPTNQ6XPR3 784 aa4.24□□□□□ -1.73
DEPDC1B-204ENST00000509006 FAM196AQ6ZSG2 479 aa4.24□□□□□ -1.73
DEPDC1B-204ENST00000509006 LSRQ86X29 649 aaPredicted RBP4.24□□□□□ -1.73
DEPDC1B-204ENST00000509006 ZNF655Q8N720 491 aaPredicted RBP4.24□□□□□ -1.73
DEPDC1B-204ENST00000509006 LINC00116Q8NCU8 138 aa4.24□□□□□ -1.73
DEPDC1B-204ENST00000509006 FCRL2Q96LA5 508 aaPredicted RBP4.24□□□□□ -1.73
DEPDC1B-204ENST00000509006 LRRC3Q9BY71 257 aa4.24□□□□□ -1.73
DEPDC1B-204ENST00000509006 TNFRSF12AQ9NP84 129 aa4.24□□□□□ -1.73
DEPDC1B-204ENST00000509006 USP40Q9NVE5 1235 aa4.24□□□□□ -1.73
DEPDC1B-204ENST00000509006 PALD1Q9ULE6 856 aa4.24□□□□□ -1.73
DEPDC1B-204ENST00000509006 MINPP1Q9UNW1 487 aa4.24□□□□□ -1.73
DEPDC1B-204ENST00000509006 MATN3O15232 486 aa4.23□□□□□ -1.73
DEPDC1B-204ENST00000509006 SORBS3O60504 671 aa4.23□□□□□ -1.73
DEPDC1B-204ENST00000509006 PRKCAP17252 672 aa4.23□□□□□ -1.73
DEPDC1B-204ENST00000509006 ZNF200P98182 395 aaPredicted RBP4.23□□□□□ -1.73
DEPDC1B-204ENST00000509006 TMEM62Q0P6H9 643 aa4.23□□□□□ -1.73
DEPDC1B-204ENST00000509006 PWP1Q13610 501 aa4.23□□□□□ -1.73
DEPDC1B-204ENST00000509006 DIEXFQ68CQ4 756 aaKnown RBP4.23□□□□□ -1.73
DEPDC1B-204ENST00000509006 ERMP1Q7Z2K6 904 aa4.23□□□□□ -1.73
DEPDC1B-204ENST00000509006 RELL1Q8IUW5 271 aa4.23□□□□□ -1.73
DEPDC1B-204ENST00000509006 GOLM1Q8NBJ4 401 aa4.23□□□□□ -1.73
DEPDC1B-204ENST00000509006 NUP43Q8NFH3 380 aa4.23□□□□□ -1.73
DEPDC1B-204ENST00000509006 SPATA25Q9BR10 227 aa4.23□□□□□ -1.73
DEPDC1B-204ENST00000509006 TNFRSF10DQ9UBN6 386 aa4.23□□□□□ -1.73
DEPDC1B-204ENST00000509006 WTIPA6NIX2 430 aaPredicted RBP4.22□□□□□ -1.73
DEPDC1B-204ENST00000509006 GREM1O60565 184 aa4.22□□□□□ -1.73
DEPDC1B-204ENST00000509006 ATE1O95260 518 aa4.22□□□□□ -1.73
DEPDC1B-204ENST00000509006 PRAMEF1O95521 474 aa4.22□□□□□ -1.73
DEPDC1B-204ENST00000509006 PLA2G1BP04054 148 aaKnown RBP4.22□□□□□ -1.73
DEPDC1B-204ENST00000509006 GBP1P32455 592 aa4.22□□□□□ -1.73
DEPDC1B-204ENST00000509006 MAGEA10P43363 369 aaPredicted RBP4.22□□□□□ -1.73
DEPDC1B-204ENST00000509006 CEBPAP49715 358 aaPredicted RBP4.22□□□□□ -1.73
DEPDC1B-204ENST00000509006 CHMP4BP1P59074 171 aa4.22□□□□□ -1.73
DEPDC1B-204ENST00000509006 ADAM17P78536 824 aa4.22□□□□□ -1.73
DEPDC1B-204ENST00000509006 CYP4F8P98187 520 aa4.22□□□□□ -1.73
DEPDC1B-204ENST00000509006 LAPTM5Q13571 262 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms