RNA–Protein interactions for RNA: ENST00000508532.5

ATP2C1-214, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,969 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-214ENST00000508532 UBA5Q9GZZ9 404 aa16.34■□□□□ 0.21
ATP2C1-214ENST00000508532 TRIM58Q8NG06 486 aa16.33■□□□□ 0.21
ATP2C1-214ENST00000508532 RNF26Q9BY78 433 aaPredicted RBP16.33■□□□□ 0.21
ATP2C1-214ENST00000508532 FAM169AQ9Y6X4 670 aa16.33■□□□□ 0.21
ATP2C1-214ENST00000508532 CPDO75976 1380 aa16.33■□□□□ 0.2
ATP2C1-214ENST00000508532 FAM170AA1A519 330 aa16.33■□□□□ 0.2
ATP2C1-214ENST00000508532 PLEKHA8P1O95397 391 aa16.33■□□□□ 0.2
ATP2C1-214ENST00000508532 NF2P35240 595 aa16.33■□□□□ 0.2
ATP2C1-214ENST00000508532 DYMQ7RTS9 669 aa16.33■□□□□ 0.2
ATP2C1-214ENST00000508532 ZNF579Q8NAF0 562 aaKnown RBP16.33■□□□□ 0.2
ATP2C1-214ENST00000508532 ZSCAN10Q96SZ4 725 aaPredicted RBP16.33■□□□□ 0.2
ATP2C1-214ENST00000508532 RWDD2AQ9UIY3 292 aa16.33■□□□□ 0.2
ATP2C1-214ENST00000508532 PDE8AO60658 829 aa16.33■□□□□ 0.2
ATP2C1-214ENST00000508532 NAPAP54920 295 aa16.33■□□□□ 0.2
ATP2C1-214ENST00000508532 PDCLQ13371 301 aa16.33■□□□□ 0.2
ATP2C1-214ENST00000508532 MYCBPQ99417 103 aaPredicted RBP16.33■□□□□ 0.2
ATP2C1-214ENST00000508532 E7EVH7 732 aa16.33■□□□□ 0.2
ATP2C1-214ENST00000508532 CD44P16070 742 aaKnown RBP16.33■□□□□ 0.2
ATP2C1-214ENST00000508532 IFT20Q8IY31 132 aa16.33■□□□□ 0.2
ATP2C1-214ENST00000508532 PCDH11XQ9BZA7 1347 aa16.32■□□□□ 0.2
ATP2C1-214ENST00000508532 PCDH11YQ9BZA8 1340 aa16.32■□□□□ 0.2
ATP2C1-214ENST00000508532 USP17L12C9JPN9 530 aa16.32■□□□□ 0.2
ATP2C1-214ENST00000508532 USP17L21D6R901 530 aa16.32■□□□□ 0.2
ATP2C1-214ENST00000508532 CCDC152Q4G0S7 254 aa16.32■□□□□ 0.2
ATP2C1-214ENST00000508532 COG1Q8WTW3 980 aa16.32■□□□□ 0.2
ATP2C1-214ENST00000508532 HNRNPLLQ8WVV9 542 aaKnown RBP16.32■□□□□ 0.2
ATP2C1-214ENST00000508532 SPAG5Q96R06 1193 aa16.32■□□□□ 0.2
ATP2C1-214ENST00000508532 MCM9Q9NXL9 1143 aa16.32■□□□□ 0.2
ATP2C1-214ENST00000508532 ACTN4O43707 911 aaKnown RBP16.32■□□□□ 0.2
ATP2C1-214ENST00000508532 TTLL11Q8NHH1 800 aa16.32■□□□□ 0.2
ATP2C1-214ENST00000508532 CRNKL1Q9BZJ0 848 aaKnown RBP16.32■□□□□ 0.2
ATP2C1-214ENST00000508532 NHEJ1Q9H9Q4 299 aaPredicted RBP16.32■□□□□ 0.2
ATP2C1-214ENST00000508532 SMIM23A6NLE4 172 aa16.32■□□□□ 0.2
ATP2C1-214ENST00000508532 IL2RBP14784 551 aa16.32■□□□□ 0.2
ATP2C1-214ENST00000508532 ZNF658Q5TYW1 1059 aaPredicted RBP16.32■□□□□ 0.2
ATP2C1-214ENST00000508532 SPTY2D1Q68D10 685 aaPredicted RBP16.32■□□□□ 0.2
ATP2C1-214ENST00000508532 SOS2Q07890 1332 aaPredicted RBP16.32■□□□□ 0.2
ATP2C1-214ENST00000508532 PRCPP42785 496 aa16.31■□□□□ 0.2
ATP2C1-214ENST00000508532 TOB1P50616 345 aaPredicted RBP16.31■□□□□ 0.2
ATP2C1-214ENST00000508532 TMEM266Q2M3C6 531 aa16.31■□□□□ 0.2
ATP2C1-214ENST00000508532 CPLX4Q7Z7G2 160 aa16.31■□□□□ 0.2
ATP2C1-214ENST00000508532 NOX5Q96PH1 765 aa16.31■□□□□ 0.2
ATP2C1-214ENST00000508532 MOCS3O95396 460 aa16.31■□□□□ 0.2
ATP2C1-214ENST00000508532 GUCY2DQ02846 1103 aa16.31■□□□□ 0.2
ATP2C1-214ENST00000508532 RAPGEF1Q13905 1077 aa16.31■□□□□ 0.2
ATP2C1-214ENST00000508532 SGMS1Q86VZ5 419 aa16.31■□□□□ 0.2
ATP2C1-214ENST00000508532 TICAM2Q86XR7 235 aa16.31■□□□□ 0.2
ATP2C1-214ENST00000508532 MB21D1Q8N884 522 aa16.31■□□□□ 0.2
ATP2C1-214ENST00000508532 UBLCP1Q8WVY7 318 aaPredicted RBP16.31■□□□□ 0.2
ATP2C1-214ENST00000508532 CCDC43Q96MW1 224 aaKnown RBP16.31■□□□□ 0.2
ATP2C1-214ENST00000508532 FBXO3Q9UK99 471 aa16.31■□□□□ 0.2
ATP2C1-214ENST00000508532 ZNF18P17022 549 aa16.31■□□□□ 0.2
ATP2C1-214ENST00000508532 TBX2Q13207 712 aaPredicted RBP16.31■□□□□ 0.2
ATP2C1-214ENST00000508532 INF2Q27J81 1249 aa16.31■□□□□ 0.2
ATP2C1-214ENST00000508532 LRRC31Q6UY01 552 aa16.31■□□□□ 0.2
ATP2C1-214ENST00000508532 WDR19Q8NEZ3 1342 aa16.31■□□□□ 0.2
ATP2C1-214ENST00000508532 TLDC2A0PJX2 215 aa16.31■□□□□ 0.2
ATP2C1-214ENST00000508532 GOLGA8KD6RF30 607 aa16.31■□□□□ 0.2
ATP2C1-214ENST00000508532 ERVK-24P63145 666 aa16.31■□□□□ 0.2
ATP2C1-214ENST00000508532 UIMC1Q96RL1 719 aa16.31■□□□□ 0.2
ATP2C1-214ENST00000508532 RASGRF1Q13972 1273 aa16.3■□□□□ 0.2
ATP2C1-214ENST00000508532 CNOT6LQ96LI5 555 aaKnown RBP16.3■□□□□ 0.2
ATP2C1-214ENST00000508532 HYOU1Q9Y4L1 999 aa16.3■□□□□ 0.2
ATP2C1-214ENST00000508532 CFAP221Q4G0U5 840 aa16.3■□□□□ 0.2
ATP2C1-214ENST00000508532 CEP85LQ5SZL2 805 aa16.3■□□□□ 0.2
ATP2C1-214ENST00000508532 SAMD1Q6SPF0 538 aaPredicted RBP16.3■□□□□ 0.2
ATP2C1-214ENST00000508532 SMCR8Q8TEV9 937 aaPredicted RBP16.3■□□□□ 0.2
ATP2C1-214ENST00000508532 DYDC1Q8WWB3 177 aa16.3■□□□□ 0.2
ATP2C1-214ENST00000508532 FAM184BQ9ULE4 1060 aa16.3■□□□□ 0.2
ATP2C1-214ENST00000508532 HEG1Q9ULI3 1381 aa16.3■□□□□ 0.2
ATP2C1-214ENST00000508532 MMS22LQ6ZRQ5 1243 aa16.3■□□□□ 0.2
ATP2C1-214ENST00000508532 TULP2O00295 520 aa16.3■□□□□ 0.2
ATP2C1-214ENST00000508532 PAK2Q13177 524 aa16.3■□□□□ 0.2
ATP2C1-214ENST00000508532 PPP2R5BQ15173 497 aa16.3■□□□□ 0.2
ATP2C1-214ENST00000508532 PAXIP1Q6ZW49 1069 aaPredicted RBP16.3■□□□□ 0.2
ATP2C1-214ENST00000508532 SLC39A2Q9NP94 309 aa16.3■□□□□ 0.2
ATP2C1-214ENST00000508532 SPATA31D1Q6ZQQ2 1576 aa16.3■□□□□ 0.2
ATP2C1-214ENST00000508532 TRAF5O00463 557 aa16.29■□□□□ 0.2
ATP2C1-214ENST00000508532 TSPY3P0CV98 308 aa16.29■□□□□ 0.2
ATP2C1-214ENST00000508532 TSPY8P0CW00 308 aa16.29■□□□□ 0.2
ATP2C1-214ENST00000508532 SCG2P13521 617 aa16.29■□□□□ 0.2
ATP2C1-214ENST00000508532 TXKP42681 527 aa16.29■□□□□ 0.2
ATP2C1-214ENST00000508532 KRT26Q7Z3Y9 468 aa16.29■□□□□ 0.2
ATP2C1-214ENST00000508532 ARFGAP2Q8N6H7 521 aa16.29■□□□□ 0.2
ATP2C1-214ENST00000508532 STK36Q9NRP7 1315 aa16.29■□□□□ 0.2
ATP2C1-214ENST00000508532 SEMA3EO15041 775 aa16.29■□□□□ 0.2
ATP2C1-214ENST00000508532 RASSF7Q02833 373 aa16.29■□□□□ 0.2
ATP2C1-214ENST00000508532 TMEM139Q8IV31 216 aa16.29■□□□□ 0.2
ATP2C1-214ENST00000508532 RAB34Q9BZG1 259 aa16.29■□□□□ 0.2
ATP2C1-214ENST00000508532 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.29■□□□□ 0.21e-6■■■□□ 15.2
ATP2C1-214ENST00000508532 CCNT1O60563 726 aaKnown RBP16.29■□□□□ 0.2
ATP2C1-214ENST00000508532 MSANTD4Q8NCY6 345 aa16.29■□□□□ 0.2
ATP2C1-214ENST00000508532 TRIM31Q9BZY9 425 aa16.29■□□□□ 0.2
ATP2C1-214ENST00000508532 PXDNQ92626 1479 aa16.29■□□□□ 0.2
ATP2C1-214ENST00000508532 TCP1P17987 556 aaKnown RBP16.29■□□□□ 0.2
ATP2C1-214ENST00000508532 GBP2P32456 591 aaPredicted RBP16.29■□□□□ 0.2
ATP2C1-214ENST00000508532 CABP7Q86V35 215 aa16.29■□□□□ 0.2
ATP2C1-214ENST00000508532 HSD3B7Q9H2F3 369 aa16.29■□□□□ 0.2
ATP2C1-214ENST00000508532 NIP7Q9Y221 180 aaKnown RBP eCLIP16.29■□□□□ 0.2
ATP2C1-214ENST00000508532 ABL1P00519 1130 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms