RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 SCG2P13521 617 aa20.18■□□□□ 0.82
RNF4-209ENST00000507784 PDIA4P13667 645 aaKnown RBP20.18■□□□□ 0.82
RNF4-209ENST00000507784 XBP1P17861 261 aa20.18■□□□□ 0.82
RNF4-209ENST00000507784 YY1P25490 414 aa20.18■□□□□ 0.82
RNF4-209ENST00000507784 PFKFB3Q16875 520 aaPredicted RBP20.18■□□□□ 0.82
RNF4-209ENST00000507784 MCTP1Q6DN14 999 aa20.18■□□□□ 0.82
RNF4-209ENST00000507784 SMC1BQ8NDV3 1235 aa20.18■□□□□ 0.82
RNF4-209ENST00000507784 OPTNQ96CV9 577 aa20.18■□□□□ 0.82
RNF4-209ENST00000507784 TANGO6Q9C0B7 1094 aa20.18■□□□□ 0.82
RNF4-209ENST00000507784 JMJD4Q9H9V9 463 aa20.18■□□□□ 0.82
RNF4-209ENST00000507784 GJB4Q9NTQ9 266 aa20.18■□□□□ 0.82
RNF4-209ENST00000507784 FEM1BQ9UK73 627 aa20.18■□□□□ 0.82
RNF4-209ENST00000507784 MTMR6Q9Y217 621 aa20.18■□□□□ 0.82
RNF4-209ENST00000507784 UNCXA6NJT0 531 aa20.17■□□□□ 0.82
RNF4-209ENST00000507784 BRD1O95696 1058 aa20.17■□□□□ 0.82
RNF4-209ENST00000507784 STAT2P52630 851 aa20.17■□□□□ 0.82
RNF4-209ENST00000507784 SNAP25P60880 206 aa20.17■□□□□ 0.82
RNF4-209ENST00000507784 CST9Q5W186 159 aa20.17■□□□□ 0.82
RNF4-209ENST00000507784 KRT40Q6A162 431 aa20.17■□□□□ 0.82
RNF4-209ENST00000507784 GADL1Q6ZQY3 521 aa20.17■□□□□ 0.82
RNF4-209ENST00000507784 FAM160B2Q86V87 743 aa20.17■□□□□ 0.82
RNF4-209ENST00000507784 RBM46Q8TBY0 533 aaKnown RBP20.17■□□□□ 0.82
RNF4-209ENST00000507784 GPKOWQ92917 476 aaPredicted RBP eCLIP20.17■□□□□ 0.82
RNF4-209ENST00000507784 KIFC2Q96AC6 838 aa20.17■□□□□ 0.82
RNF4-209ENST00000507784 RPAP3Q9H6T3 665 aaPredicted RBP20.17■□□□□ 0.82
RNF4-209ENST00000507784 VPS54Q9P1Q0 977 aa20.17■□□□□ 0.82
RNF4-209ENST00000507784 ZDHHC9Q9Y397 364 aa20.17■□□□□ 0.82
RNF4-209ENST00000507784 VCAM1P19320 739 aa20.16■□□□□ 0.82
RNF4-209ENST00000507784 PPIL2Q13356 520 aa20.16■□□□□ 0.82
RNF4-209ENST00000507784 BTNL9Q6UXG8 535 aa20.16■□□□□ 0.82
RNF4-209ENST00000507784 HEATR3Q7Z4Q2 680 aa20.16■□□□□ 0.82
RNF4-209ENST00000507784 PRR12Q9ULL5 1215 aa20.16■□□□□ 0.82
RNF4-209ENST00000507784 KCNJ14Q9UNX9 436 aa20.16■□□□□ 0.82
RNF4-209ENST00000507784 CXCL11O14625 94 aa20.15■□□□□ 0.82
RNF4-209ENST00000507784 IRF6O14896 467 aa20.15■□□□□ 0.82
RNF4-209ENST00000507784 SH3D19Q5HYK7 790 aa20.15■□□□□ 0.82
RNF4-209ENST00000507784 FERMT3Q86UX7 667 aa20.15■□□□□ 0.82
RNF4-209ENST00000507784 FBXO18Q8NFZ0 1043 aa20.15■□□□□ 0.82
RNF4-209ENST00000507784 C12orf42Q96LP6 360 aa20.15■□□□□ 0.82
RNF4-209ENST00000507784 FBXO28Q9NVF7 368 aa20.15■□□□□ 0.82
RNF4-209ENST00000507784 PNMA6FA0A0J9YX94 578 aa20.14■□□□□ 0.81
RNF4-209ENST00000507784 F13A1P00488 732 aa20.14■□□□□ 0.81
RNF4-209ENST00000507784 HUNKP57058 714 aa20.14■□□□□ 0.81
RNF4-209ENST00000507784 NLRP5P59047 1200 aa20.14■□□□□ 0.81
RNF4-209ENST00000507784 GNL2Q13823 731 aaKnown RBP20.14■□□□□ 0.81
RNF4-209ENST00000507784 SAFBQ15424 915 aaKnown RBP eCLIP20.14■□□□□ 0.81
RNF4-209ENST00000507784 CDC37Q16543 378 aaPredicted RBP20.14■□□□□ 0.81
RNF4-209ENST00000507784 WWC2Q6AWC2 1192 aa20.14■□□□□ 0.81
RNF4-209ENST00000507784 CTDP1Q9Y5B0 961 aaPredicted RBP20.14■□□□□ 0.81
RNF4-209ENST00000507784 ZBTB5O15062 677 aa20.13■□□□□ 0.81
RNF4-209ENST00000507784 PLA2G6O60733 806 aa20.13■□□□□ 0.81
RNF4-209ENST00000507784 FLOT1O75955 427 aa20.13■□□□□ 0.81
RNF4-209ENST00000507784 MKRN3Q13064 507 aaKnown RBP20.13■□□□□ 0.81
RNF4-209ENST00000507784 QRICH1Q2TAL8 776 aa20.13■□□□□ 0.81
RNF4-209ENST00000507784 FOXD4L6Q3SYB3 417 aaPredicted RBP20.13■□□□□ 0.81
RNF4-209ENST00000507784 CCDC174Q6PII3 467 aa20.13■□□□□ 0.81
RNF4-209ENST00000507784 FOXD4L3Q6VB84 417 aaPredicted RBP20.13■□□□□ 0.81
RNF4-209ENST00000507784 TNPO1Q92973 898 aaKnown RBP20.13■□□□□ 0.81
RNF4-209ENST00000507784 COA7Q96BR5 231 aa20.13■□□□□ 0.81
RNF4-209ENST00000507784 WNK4Q96J92 1243 aa20.13■□□□□ 0.81
RNF4-209ENST00000507784 SLF1Q9BQI6 1058 aa20.13■□□□□ 0.81
RNF4-209ENST00000507784 PTPRFP10586 1907 aa20.13■□□□□ 0.81
RNF4-209ENST00000507784 PASKQ96RG2 1323 aa20.12■□□□□ 0.81
RNF4-209ENST00000507784 USP17L15C9J2P7 530 aa20.12■□□□□ 0.81
RNF4-209ENST00000507784 USP17L13C9JLJ4 530 aa20.12■□□□□ 0.81
RNF4-209ENST00000507784 USP17L11C9JVI0 530 aa20.12■□□□□ 0.81
RNF4-209ENST00000507784 USP17L18D6R9N7 530 aa20.12■□□□□ 0.81
RNF4-209ENST00000507784 USP17L22D6RA61 530 aa20.12■□□□□ 0.81
RNF4-209ENST00000507784 USP17L17D6RBQ6 530 aa20.12■□□□□ 0.81
RNF4-209ENST00000507784 USP17L19D6RCP7 530 aa20.12■□□□□ 0.81
RNF4-209ENST00000507784 USP17L20D6RJB6 530 aa20.12■□□□□ 0.81
RNF4-209ENST00000507784 TOMM70O94826 608 aa20.12■□□□□ 0.81
RNF4-209ENST00000507784 GJA5P36382 358 aa20.12■□□□□ 0.81
RNF4-209ENST00000507784 NAPAP54920 295 aa20.12■□□□□ 0.81
RNF4-209ENST00000507784 USP17L24Q0WX57 530 aa20.12■□□□□ 0.81
RNF4-209ENST00000507784 PRPF38AQ8NAV1 312 aaKnown RBP20.12■□□□□ 0.81
RNF4-209ENST00000507784 MTMR8Q96EF0 704 aa20.12■□□□□ 0.81
RNF4-209ENST00000507784 SH3GLB2Q9NR46 395 aa20.12■□□□□ 0.81
RNF4-209ENST00000507784 BARHL2Q9NY43 387 aa20.12■□□□□ 0.81
RNF4-209ENST00000507784 KCNH4Q9UQ05 1017 aa20.12■□□□□ 0.81
RNF4-209ENST00000507784 A0A0G2JLL6 359 aaPredicted RBP20.11■□□□□ 0.81
RNF4-209ENST00000507784 STXBP3O00186 592 aa20.11■□□□□ 0.81
RNF4-209ENST00000507784 MMP1P03956 469 aa20.11■□□□□ 0.81
RNF4-209ENST00000507784 CATSPERGQ6ZRH7 1159 aa20.11■□□□□ 0.81
RNF4-209ENST00000507784 PRRT2Q7Z6L0 340 aaPredicted RBP20.11■□□□□ 0.81
RNF4-209ENST00000507784 FBXO11Q86XK2 927 aa20.11■□□□□ 0.81
RNF4-209ENST00000507784 RGS22Q8NE09 1264 aa20.11■□□□□ 0.81
RNF4-209ENST00000507784 CCDC148Q8NFR7 591 aa20.11■□□□□ 0.81
RNF4-209ENST00000507784 CCDC12Q8WUD4 166 aaPredicted RBP20.11■□□□□ 0.81
RNF4-209ENST00000507784 PHF20Q9BVI0 1012 aa20.11■□□□□ 0.81
RNF4-209ENST00000507784 BRMS1Q9HCU9 246 aa20.11■□□□□ 0.81
RNF4-209ENST00000507784 hCG_1984214I3L0E3 225 aa20.1■□□□□ 0.81
RNF4-209ENST00000507784 RESTQ13127 1097 aa20.1■□□□□ 0.81
RNF4-209ENST00000507784 SNAPC2Q13487 334 aa20.1■□□□□ 0.81
RNF4-209ENST00000507784 FASTKD5Q7L8L6 764 aaKnown RBP20.1■□□□□ 0.81
RNF4-209ENST00000507784 ZNF713Q8N859 430 aaPredicted RBP20.1■□□□□ 0.81
RNF4-209ENST00000507784 PROCA1Q8NCQ7 364 aaPredicted RBP20.1■□□□□ 0.81
RNF4-209ENST00000507784 SHISA4Q96DD7 197 aa20.1■□□□□ 0.81
RNF4-209ENST00000507784 ZSCAN16Q9H4T2 348 aaPredicted RBP20.1■□□□□ 0.81
RNF4-209ENST00000507784 SMCO2A6NFE2 343 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms