RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 ENPP3O14638 875 aa8.65□□□□□ -1.02
HERC4-213ENST00000506515 VAMP4O75379 141 aa8.65□□□□□ -1.02
HERC4-213ENST00000506515 HSD3B2P26439 372 aa8.65□□□□□ -1.02
HERC4-213ENST00000506515 CANXP27824 592 aaKnown RBP8.65□□□□□ -1.02
HERC4-213ENST00000506515 GRIA2P42262 883 aa8.65□□□□□ -1.02
HERC4-213ENST00000506515 YOD1Q5VVQ6 348 aaPredicted RBP8.65□□□□□ -1.02
HERC4-213ENST00000506515 EGFLAMQ63HQ2 1017 aa8.65□□□□□ -1.02
HERC4-213ENST00000506515 HOMER1Q86YM7 354 aa8.65□□□□□ -1.02
HERC4-213ENST00000506515 ZDHHC13Q8IUH4 622 aa8.65□□□□□ -1.02
HERC4-213ENST00000506515 TRIM59Q8IWR1 403 aa8.65□□□□□ -1.02
HERC4-213ENST00000506515 SPACA3Q8IXA5 215 aa8.65□□□□□ -1.02
HERC4-213ENST00000506515 PLD6Q8N2A8 252 aaKnown RBP8.65□□□□□ -1.02
HERC4-213ENST00000506515 ZSWIM2Q8NEG5 633 aa8.65□□□□□ -1.02
HERC4-213ENST00000506515 BTN2A2Q8WVV5 523 aa8.65□□□□□ -1.02
HERC4-213ENST00000506515 MRGPRX3Q96LB0 322 aa8.65□□□□□ -1.02
HERC4-213ENST00000506515 HSPA12BQ96MM6 686 aa8.65□□□□□ -1.02
HERC4-213ENST00000506515 CDC6Q99741 560 aa8.65□□□□□ -1.02
HERC4-213ENST00000506515 AARSD1Q9BTE6 412 aaKnown RBP8.65□□□□□ -1.02
HERC4-213ENST00000506515 GPR62Q9BZJ7 368 aa8.65□□□□□ -1.02
HERC4-213ENST00000506515 DUSP15Q9H1R2 295 aaPredicted RBP8.65□□□□□ -1.02
HERC4-213ENST00000506515 MKNK2Q9HBH9 465 aa8.65□□□□□ -1.02
HERC4-213ENST00000506515 GPATCH2Q9NW75 528 aa8.65□□□□□ -1.02
HERC4-213ENST00000506515 PIM2Q9P1W9 311 aa8.65□□□□□ -1.02
HERC4-213ENST00000506515 PLAGL2Q9UPG8 496 aa8.65□□□□□ -1.02
HERC4-213ENST00000506515 SF3B6Q9Y3B4 125 aaKnown RBP8.65□□□□□ -1.02
HERC4-213ENST00000506515 ST14Q9Y5Y6 855 aa8.65□□□□□ -1.02
HERC4-213ENST00000506515 TRAV20A0A0B4J274 112 aa8.64□□□□□ -1.03
HERC4-213ENST00000506515 WASH4PA8MWX3 477 aa8.64□□□□□ -1.03
HERC4-213ENST00000506515 H0Y8X5 98 aa8.64□□□□□ -1.03
HERC4-213ENST00000506515 H3BS24 57 aa8.64□□□□□ -1.03
HERC4-213ENST00000506515 CLSTN1O94985 981 aa8.64□□□□□ -1.03
HERC4-213ENST00000506515 L1CAMP32004 1257 aa8.64□□□□□ -1.03
HERC4-213ENST00000506515 CPSF6Q16630 551 aaKnown RBP eCLIP8.64□□□□□ -1.03
HERC4-213ENST00000506515 FOXB2Q5VYV0 432 aa8.64□□□□□ -1.03
HERC4-213ENST00000506515 HDAC8Q9BY41 377 aa8.64□□□□□ -1.03
HERC4-213ENST00000506515 TRIT1Q9H3H1 467 aaKnown RBP8.64□□□□□ -1.03
HERC4-213ENST00000506515 ZSWIM5Q9P217 1185 aa8.64□□□□□ -1.03
HERC4-213ENST00000506515 SRFP11831 508 aa8.63□□□□□ -1.03
HERC4-213ENST00000506515 LONRF2Q1L5Z9 754 aa8.63□□□□□ -1.03
HERC4-213ENST00000506515 DPY19L1Q2PZI1 675 aa8.63□□□□□ -1.03
HERC4-213ENST00000506515 CWF19L1Q69YN2 538 aaKnown RBP8.63□□□□□ -1.03
HERC4-213ENST00000506515 GTF2IRD2BQ6EKJ0 949 aa8.63□□□□□ -1.03
HERC4-213ENST00000506515 CRTC3Q6UUV7 619 aa8.63□□□□□ -1.03
HERC4-213ENST00000506515 ZNF662Q6ZS27 426 aa8.63□□□□□ -1.03
HERC4-213ENST00000506515 GTF2IRD2Q86UP8 949 aa8.63□□□□□ -1.03
HERC4-213ENST00000506515 ENOX1Q8TC92 643 aaKnown RBP8.63□□□□□ -1.03
HERC4-213ENST00000506515 UBE2FQ969M7 185 aa8.63□□□□□ -1.03
HERC4-213ENST00000506515 IPO9Q96P70 1041 aaKnown RBP8.63□□□□□ -1.03
HERC4-213ENST00000506515 SLC26A8Q96RN1 970 aa8.63□□□□□ -1.03
HERC4-213ENST00000506515 GPR55Q9Y2T6 319 aaPredicted RBP8.63□□□□□ -1.03
HERC4-213ENST00000506515 PRR19A6NJB7 356 aa8.62□□□□□ -1.03
HERC4-213ENST00000506515 PRODHO43272 600 aa8.62□□□□□ -1.03
HERC4-213ENST00000506515 FURINP09958 794 aa8.62□□□□□ -1.03
HERC4-213ENST00000506515 TPP2P29144 1249 aaPredicted RBP8.62□□□□□ -1.03
HERC4-213ENST00000506515 CTSKP43235 329 aa8.62□□□□□ -1.03
HERC4-213ENST00000506515 AMPD2Q01433 879 aa8.62□□□□□ -1.03
HERC4-213ENST00000506515 TMEM67Q5HYA8 995 aa8.62□□□□□ -1.03
HERC4-213ENST00000506515 FAM209AQ5JX71 171 aa8.62□□□□□ -1.03
HERC4-213ENST00000506515 ZNF655Q8N720 491 aaPredicted RBP8.62□□□□□ -1.03
HERC4-213ENST00000506515 DAGLBQ8NCG7 672 aa8.62□□□□□ -1.03
HERC4-213ENST00000506515 NETO1Q8TDF5 533 aa8.62□□□□□ -1.03
HERC4-213ENST00000506515 TCTN2Q96GX1 697 aa8.62□□□□□ -1.03
HERC4-213ENST00000506515 IER2Q9BTL4 223 aa8.62□□□□□ -1.03
HERC4-213ENST00000506515 ZC3H7BQ9UGR2 993 aaKnown RBP8.62□□□□□ -1.03
HERC4-213ENST00000506515 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.62□□□□□ -1.03
HERC4-213ENST00000506515 SBNO2Q9Y2G9 1366 aa8.61□□□□□ -1.03
HERC4-213ENST00000506515 RB1CC1Q8TDY2 1594 aa8.61□□□□□ -1.03
HERC4-213ENST00000506515 ASMTLO95671 621 aa8.61□□□□□ -1.03
HERC4-213ENST00000506515 TGFB1P01137 390 aa8.61□□□□□ -1.03
HERC4-213ENST00000506515 GSNP06396 782 aa8.61□□□□□ -1.03
HERC4-213ENST00000506515 FOSL1P15407 271 aa8.61□□□□□ -1.03
HERC4-213ENST00000506515 CLCN7P51798 805 aa8.61□□□□□ -1.03
HERC4-213ENST00000506515 POU4F1Q01851 419 aa8.61□□□□□ -1.03
HERC4-213ENST00000506515 GRB10Q13322 594 aa8.61□□□□□ -1.03
HERC4-213ENST00000506515 SF1Q15637 639 aaKnown RBP8.61□□□□□ -1.03
HERC4-213ENST00000506515 IFI16Q16666 785 aaKnown RBP8.61□□□□□ -1.03
HERC4-213ENST00000506515 C16orf86Q6ZW13 317 aa8.61□□□□□ -1.03
HERC4-213ENST00000506515 SLC51AQ86UW1 340 aa8.61□□□□□ -1.03
HERC4-213ENST00000506515 TSPYL5Q86VY4 417 aaPredicted RBP8.61□□□□□ -1.03
HERC4-213ENST00000506515 EXOC2Q96KP1 924 aa8.61□□□□□ -1.03
HERC4-213ENST00000506515 TRBV23-1A0A0A0MS06 115 aa8.6□□□□□ -1.03
HERC4-213ENST00000506515 CD3EP07766 207 aa8.6□□□□□ -1.03
HERC4-213ENST00000506515 PABPC1P11940 636 aaKnown RBP8.6□□□□□ -1.03
HERC4-213ENST00000506515 HOXA10P31260 410 aaPredicted RBP8.6□□□□□ -1.03
HERC4-213ENST00000506515 KCNJ6P48051 423 aa8.6□□□□□ -1.03
HERC4-213ENST00000506515 ZC3H12BQ5HYM0 836 aaKnown RBP8.6□□□□□ -1.03
HERC4-213ENST00000506515 PRSS36Q5K4E3 855 aa8.6□□□□□ -1.03
HERC4-213ENST00000506515 NSMFQ6X4W1 530 aa8.6□□□□□ -1.03
HERC4-213ENST00000506515 DHRS4Q9BTZ2 278 aa8.6□□□□□ -1.03
HERC4-213ENST00000506515 SEMA6BQ9H3T3 888 aa8.6□□□□□ -1.03
HERC4-213ENST00000506515 TMEM265A0A087WTH1 108 aa8.59□□□□□ -1.03
HERC4-213ENST00000506515 PPP1R12AO14974 1030 aaPredicted RBP8.59□□□□□ -1.03
HERC4-213ENST00000506515 IGHA1P01876 353 aa8.59□□□□□ -1.03
HERC4-213ENST00000506515 CAPNS1P04632 268 aa8.59□□□□□ -1.03
HERC4-213ENST00000506515 SNRPB2P08579 225 aaKnown RBP8.59□□□□□ -1.03
HERC4-213ENST00000506515 FGFR1P11362 822 aa8.59□□□□□ -1.03
HERC4-213ENST00000506515 TKFCQ3LXA3 575 aa8.59□□□□□ -1.03
HERC4-213ENST00000506515 PLEKHG4Q58EX7 1191 aa8.59□□□□□ -1.03
HERC4-213ENST00000506515 SCUBE1Q8IWY4 988 aa8.59□□□□□ -1.03
HERC4-213ENST00000506515 NKX2-4Q9H2Z4 354 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms