RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 SPTLC2O15270 562 aa13.79□□□□□ -0.2
POLR2J3-211ENST00000506060 LETM1O95202 739 aaPredicted RBP13.79□□□□□ -0.2
POLR2J3-211ENST00000506060 USP14P54578 494 aa13.79□□□□□ -0.2
POLR2J3-211ENST00000506060 RRP1BQ14684 758 aaKnown RBP13.79□□□□□ -0.2
POLR2J3-211ENST00000506060 WWC2Q6AWC2 1192 aa13.79□□□□□ -0.2
POLR2J3-211ENST00000506060 MCTP2Q6DN12 878 aa13.79□□□□□ -0.2
POLR2J3-211ENST00000506060 BTNL9Q6UXG8 535 aa13.79□□□□□ -0.2
POLR2J3-211ENST00000506060 FAM160B2Q86V87 743 aa13.79□□□□□ -0.2
POLR2J3-211ENST00000506060 TEX2Q8IWB9 1127 aa13.79□□□□□ -0.2
POLR2J3-211ENST00000506060 LPAR1Q92633 364 aa13.79□□□□□ -0.2
POLR2J3-211ENST00000506060 GPKOWQ92917 476 aaPredicted RBP eCLIP13.79□□□□□ -0.2
POLR2J3-211ENST00000506060 ZMYND12Q9H0C1 365 aa13.79□□□□□ -0.2
POLR2J3-211ENST00000506060 VCPKMTQ9H867 229 aa13.79□□□□□ -0.2
POLR2J3-211ENST00000506060 JMJD4Q9H9V9 463 aa13.79□□□□□ -0.2
POLR2J3-211ENST00000506060 ZNF112Q9UJU3 913 aa13.79□□□□□ -0.2
POLR2J3-211ENST00000506060 SCN4AP35499 1836 aa13.78□□□□□ -0.2
POLR2J3-211ENST00000506060 TRIM75PA6NK02 468 aa13.78□□□□□ -0.2
POLR2J3-211ENST00000506060 PPP1R12BO60237 982 aaPredicted RBP13.78□□□□□ -0.2
POLR2J3-211ENST00000506060 PLA2G6O60733 806 aa13.78□□□□□ -0.2
POLR2J3-211ENST00000506060 GADD45BO75293 160 aaPredicted RBP13.78□□□□□ -0.2
POLR2J3-211ENST00000506060 EPHX2P34913 555 aa13.78□□□□□ -0.2
POLR2J3-211ENST00000506060 STAT2P52630 851 aa13.78□□□□□ -0.2
POLR2J3-211ENST00000506060 HIRAP54198 1017 aaPredicted RBP13.78□□□□□ -0.2
POLR2J3-211ENST00000506060 SLC39A14Q15043 492 aa13.78□□□□□ -0.2
POLR2J3-211ENST00000506060 SYDE2Q5VT97 1194 aa13.78□□□□□ -0.2
POLR2J3-211ENST00000506060 CAVIN1Q6NZI2 390 aaKnown RBP13.78□□□□□ -0.2
POLR2J3-211ENST00000506060 CCDC73Q6ZRK6 1079 aa13.78□□□□□ -0.2
POLR2J3-211ENST00000506060 KRT25Q7Z3Z0 450 aa13.78□□□□□ -0.2
POLR2J3-211ENST00000506060 PNMA8AQ86V59 439 aaPredicted RBP13.78□□□□□ -0.2
POLR2J3-211ENST00000506060 CDAN1Q8IWY9 1227 aa13.78□□□□□ -0.2
POLR2J3-211ENST00000506060 SCYL3Q8IZE3 742 aa13.78□□□□□ -0.2
POLR2J3-211ENST00000506060 LINC00301Q8NCQ3 95 aa13.78□□□□□ -0.2
POLR2J3-211ENST00000506060 GPT2Q8TD30 523 aa13.78□□□□□ -0.2
POLR2J3-211ENST00000506060 MTMR8Q96EF0 704 aa13.78□□□□□ -0.2
POLR2J3-211ENST00000506060 A0A1W2PRG0 241 aa13.77□□□□□ -0.21
POLR2J3-211ENST00000506060 SMCO2A6NFE2 343 aa13.77□□□□□ -0.21
POLR2J3-211ENST00000506060 TMEM232C9JQI7 657 aa13.77□□□□□ -0.21
POLR2J3-211ENST00000506060 PPP6R2O75170 966 aa13.77□□□□□ -0.21
POLR2J3-211ENST00000506060 POLR2AP24928 1970 aaKnown RBP13.77□□□□□ -0.21
POLR2J3-211ENST00000506060 ADCY7P51828 1080 aa13.77□□□□□ -0.21
POLR2J3-211ENST00000506060 MRPL12P52815 198 aaKnown RBP13.77□□□□□ -0.21
POLR2J3-211ENST00000506060 JAG1P78504 1218 aa13.77□□□□□ -0.21
POLR2J3-211ENST00000506060 NR5A1Q13285 461 aa13.77□□□□□ -0.21
POLR2J3-211ENST00000506060 DOCK1Q14185 1865 aa13.77□□□□□ -0.21
POLR2J3-211ENST00000506060 GSE1Q14687 1217 aa13.77□□□□□ -0.21
POLR2J3-211ENST00000506060 SHROOM1Q2M3G4 852 aaPredicted RBP13.77□□□□□ -0.21
POLR2J3-211ENST00000506060 CCDC183Q5T5S1 534 aa13.77□□□□□ -0.21
POLR2J3-211ENST00000506060 TTBK2Q6IQ55 1244 aa13.77□□□□□ -0.21
POLR2J3-211ENST00000506060 WRNIP1Q96S55 665 aa13.77□□□□□ -0.21
POLR2J3-211ENST00000506060 KIAA1683Q9H0B3 1180 aa13.77□□□□□ -0.21
POLR2J3-211ENST00000506060 GZF1Q9H116 711 aaPredicted RBP13.77□□□□□ -0.21
POLR2J3-211ENST00000506060 FEM1BQ9UK73 627 aa13.77□□□□□ -0.21
POLR2J3-211ENST00000506060 PNMA2Q9UL42 364 aa13.77□□□□□ -0.21
POLR2J3-211ENST00000506060 CLIC4Q9Y696 253 aa13.77□□□□□ -0.21
POLR2J3-211ENST00000506060 MORC2Q9Y6X9 1032 aaPredicted RBP13.77□□□□□ -0.21
POLR2J3-211ENST00000506060 A0A1W2PQ27 194 aa13.76□□□□□ -0.21
POLR2J3-211ENST00000506060 A0A1W2PQ64 194 aa13.76□□□□□ -0.21
POLR2J3-211ENST00000506060 A0A1W2PQD8 194 aa13.76□□□□□ -0.21
POLR2J3-211ENST00000506060 USP17L10C9JJH3 530 aa13.76□□□□□ -0.21
POLR2J3-211ENST00000506060 WDR46O15213 610 aaKnown RBP13.76□□□□□ -0.21
POLR2J3-211ENST00000506060 SLC16A2P36021 539 aa13.76□□□□□ -0.21
POLR2J3-211ENST00000506060 CDC37Q16543 378 aaPredicted RBP13.76□□□□□ -0.21
POLR2J3-211ENST00000506060 SLC35G1Q2M3R5 365 aa13.76□□□□□ -0.21
POLR2J3-211ENST00000506060 NOL9Q5SY16 702 aaKnown RBP13.76□□□□□ -0.21
POLR2J3-211ENST00000506060 ADALQ6DHV7 355 aa13.76□□□□□ -0.21
POLR2J3-211ENST00000506060 RASGRP2Q7LDG7 609 aa13.76□□□□□ -0.21
POLR2J3-211ENST00000506060 KRT26Q7Z3Y9 468 aa13.76□□□□□ -0.21
POLR2J3-211ENST00000506060 REXO1Q8N1G1 1221 aaKnown RBP13.76□□□□□ -0.21
POLR2J3-211ENST00000506060 ACER1Q8TDN7 264 aa13.76□□□□□ -0.21
POLR2J3-211ENST00000506060 OXER1Q8TDS5 423 aa13.76□□□□□ -0.21
POLR2J3-211ENST00000506060 CUL5Q93034 780 aa13.76□□□□□ -0.21
POLR2J3-211ENST00000506060 WDR18Q9BV38 432 aa13.76□□□□□ -0.21
POLR2J3-211ENST00000506060 AMNQ9BXJ7 453 aa13.76□□□□□ -0.21
POLR2J3-211ENST00000506060 CPVLQ9H3G5 476 aa13.76□□□□□ -0.21
POLR2J3-211ENST00000506060 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.76□□□□□ -0.21
POLR2J3-211ENST00000506060 DDX19AQ9NUU7 478 aaKnown RBP13.76□□□□□ -0.21
POLR2J3-211ENST00000506060 CUTAO60888 179 aa13.75□□□□□ -0.21
POLR2J3-211ENST00000506060 ECE1P42892 770 aa13.75□□□□□ -0.21
POLR2J3-211ENST00000506060 IREB2P48200 963 aaKnown RBP13.75□□□□□ -0.21
POLR2J3-211ENST00000506060 ORC2Q13416 577 aaPredicted RBP13.75□□□□□ -0.21
POLR2J3-211ENST00000506060 FAM83BQ5T0W9 1011 aa13.75□□□□□ -0.21
POLR2J3-211ENST00000506060 FBXO11Q86XK2 927 aa13.75□□□□□ -0.21
POLR2J3-211ENST00000506060 TNFRSF25Q93038 417 aa13.75□□□□□ -0.21
POLR2J3-211ENST00000506060 KLRG1Q96E93 195 aa13.75□□□□□ -0.21
POLR2J3-211ENST00000506060 SCAF8Q9UPN6 1271 aaKnown RBP13.75□□□□□ -0.21
POLR2J3-211ENST00000506060 CSADQ9Y600 493 aa13.75□□□□□ -0.21
POLR2J3-211ENST00000506060 C19orf81C9J6K1 198 aa13.74□□□□□ -0.21
POLR2J3-211ENST00000506060 SOCS7O14512 581 aa13.74□□□□□ -0.21
POLR2J3-211ENST00000506060 FDX1P10109 184 aa13.74□□□□□ -0.21
POLR2J3-211ENST00000506060 INPP5BP32019 993 aa13.74□□□□□ -0.21
POLR2J3-211ENST00000506060 MAP3K9P80192 1104 aa13.74□□□□□ -0.21
POLR2J3-211ENST00000506060 NONOQ15233 471 aaKnown RBP eCLIP13.74□□□□□ -0.21
POLR2J3-211ENST00000506060 NPY5RQ15761 445 aa13.74□□□□□ -0.21
POLR2J3-211ENST00000506060 QRICH1Q2TAL8 776 aa13.74□□□□□ -0.21
POLR2J3-211ENST00000506060 TTC38Q5R3I4 469 aa13.74□□□□□ -0.21
POLR2J3-211ENST00000506060 PIK3AP1Q6ZUJ8 805 aa13.74□□□□□ -0.21
POLR2J3-211ENST00000506060 CCAR1Q8IX12 1150 aaKnown RBP13.74□□□□□ -0.21
POLR2J3-211ENST00000506060 SPICE1Q8N0Z3 855 aa13.74□□□□□ -0.21
POLR2J3-211ENST00000506060 KRI1Q8N9T8 703 aaKnown RBP13.74□□□□□ -0.21
POLR2J3-211ENST00000506060 MRPS27Q92552 414 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms