RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 CHST7Q9NS84 486 aa6.2□□□□□ -1.42
CHD1-203ENST00000505657 CD247P20963 164 aa6.19□□□□□ -1.42
CHD1-203ENST00000505657 LTKP29376 864 aa6.19□□□□□ -1.42
CHD1-203ENST00000505657 EGR3Q06889 387 aa6.19□□□□□ -1.42
CHD1-203ENST00000505657 BBS9Q3SYG4 887 aa6.19□□□□□ -1.42
CHD1-203ENST00000505657 ANKRD39Q53RE8 183 aa6.19□□□□□ -1.42
CHD1-203ENST00000505657 CRTC3Q6UUV7 619 aa6.19□□□□□ -1.42
CHD1-203ENST00000505657 USHBP1Q8N6Y0 703 aa6.19□□□□□ -1.42
CHD1-203ENST00000505657 DAGLBQ8NCG7 672 aa6.19□□□□□ -1.42
CHD1-203ENST00000505657 LRRN4CLQ8ND94 238 aa6.19□□□□□ -1.42
CHD1-203ENST00000505657 FGD4Q96M96 766 aa6.19□□□□□ -1.42
CHD1-203ENST00000505657 KRTAP4-5Q9BYR2 181 aa6.19□□□□□ -1.42
CHD1-203ENST00000505657 FOXP3Q9BZS1 431 aa6.19□□□□□ -1.42
CHD1-203ENST00000505657 ASCC2Q9H1I8 757 aaPredicted RBP6.19□□□□□ -1.42
CHD1-203ENST00000505657 DNAJC25-GNG10A0A024R161 153 aa6.18□□□□□ -1.42
CHD1-203ENST00000505657 H0Y8X5 98 aa6.18□□□□□ -1.42
CHD1-203ENST00000505657 STK10O94804 968 aaKnown RBP6.18□□□□□ -1.42
CHD1-203ENST00000505657 ATP2B1P20020 1258 aa6.18□□□□□ -1.42
CHD1-203ENST00000505657 GTF2F1P35269 517 aaKnown RBP eCLIP6.18□□□□□ -1.42
CHD1-203ENST00000505657 TEKQ02763 1124 aa6.18□□□□□ -1.42
CHD1-203ENST00000505657 PKN1Q16512 942 aa6.18□□□□□ -1.42
CHD1-203ENST00000505657 RALGPS1Q5JS13 557 aa6.18□□□□□ -1.42
CHD1-203ENST00000505657 SLC23A3Q6PIS1 610 aa6.18□□□□□ -1.42
CHD1-203ENST00000505657 ZPBP2Q6X784 338 aa6.18□□□□□ -1.42
CHD1-203ENST00000505657 FAM178BQ8IXR5 827 aa6.18□□□□□ -1.42
CHD1-203ENST00000505657 ZNF513Q8N8E2 541 aaPredicted RBP6.18□□□□□ -1.42
CHD1-203ENST00000505657 ADCY4Q8NFM4 1077 aa6.18□□□□□ -1.42
CHD1-203ENST00000505657 ENOX1Q8TC92 643 aaKnown RBP6.18□□□□□ -1.42
CHD1-203ENST00000505657 PI4K2BQ8TCG2 481 aa6.18□□□□□ -1.42
CHD1-203ENST00000505657 FAM168AQ92567 244 aa6.18□□□□□ -1.42
CHD1-203ENST00000505657 ST7Q9NRC1 585 aa6.18□□□□□ -1.42
CHD1-203ENST00000505657 C19orf73Q9NVV2 129 aa6.18□□□□□ -1.42
CHD1-203ENST00000505657 LMCD1Q9NZU5 365 aa6.18□□□□□ -1.42
CHD1-203ENST00000505657 SLAMF8Q9P0V8 285 aa6.18□□□□□ -1.42
CHD1-203ENST00000505657 APEX2Q9UBZ4 518 aa6.18□□□□□ -1.42
CHD1-203ENST00000505657 GJB6O95452 261 aa6.17□□□□□ -1.42
CHD1-203ENST00000505657 HEATR6Q6AI08 1181 aaKnown RBP6.17□□□□□ -1.42
CHD1-203ENST00000505657 ATG4DQ86TL0 474 aaPredicted RBP6.17□□□□□ -1.42
CHD1-203ENST00000505657 KSR1Q8IVT5 923 aa6.17□□□□□ -1.42
CHD1-203ENST00000505657 ZNF655Q8N720 491 aaPredicted RBP6.17□□□□□ -1.42
CHD1-203ENST00000505657 LGR4Q9BXB1 951 aa6.17□□□□□ -1.42
CHD1-203ENST00000505657 NOL6Q9H6R4 1146 aaKnown RBP6.17□□□□□ -1.42
CHD1-203ENST00000505657 PRR13Q9NZ81 148 aa6.17□□□□□ -1.42
CHD1-203ENST00000505657 EBF1Q9UH73 591 aa6.17□□□□□ -1.42
CHD1-203ENST00000505657 TMEM82A0PJX8 343 aa6.16□□□□□ -1.42
CHD1-203ENST00000505657 FKTNO75072 461 aa6.16□□□□□ -1.42
CHD1-203ENST00000505657 DDAH1O94760 285 aa6.16□□□□□ -1.42
CHD1-203ENST00000505657 SYPP08247 313 aa6.16□□□□□ -1.42
CHD1-203ENST00000505657 FIBCD1Q8N539 461 aa6.16□□□□□ -1.42
CHD1-203ENST00000505657 ALPK1Q96QP1 1244 aa6.16□□□□□ -1.42
CHD1-203ENST00000505657 DSCC1Q9BVC3 393 aa6.16□□□□□ -1.42
CHD1-203ENST00000505657 RC3H2Q9HBD1 1191 aaKnown RBP6.16□□□□□ -1.42
CHD1-203ENST00000505657 TCFL5Q9UL49 500 aa6.16□□□□□ -1.42
CHD1-203ENST00000505657 FHOD1Q9Y613 1164 aa6.16□□□□□ -1.42
CHD1-203ENST00000505657 ITGA4P13612 1032 aa6.15□□□□□ -1.42
CHD1-203ENST00000505657 RAB33AQ14088 237 aa6.15□□□□□ -1.42
CHD1-203ENST00000505657 PPP2R5DQ14738 602 aa6.15□□□□□ -1.42
CHD1-203ENST00000505657 NCAPHQ15003 741 aa6.15□□□□□ -1.42
CHD1-203ENST00000505657 FXNQ16595 210 aa6.15□□□□□ -1.42
CHD1-203ENST00000505657 DDR2Q16832 855 aa6.15□□□□□ -1.42
CHD1-203ENST00000505657 NOL9Q5SY16 702 aaKnown RBP6.15□□□□□ -1.42
CHD1-203ENST00000505657 LINC00116Q8NCU8 138 aa6.15□□□□□ -1.42
CHD1-203ENST00000505657 SREK1Q8WXA9 508 aaKnown RBP6.15□□□□□ -1.42
CHD1-203ENST00000505657 ZDHHC15Q96MV8 337 aa6.15□□□□□ -1.42
CHD1-203ENST00000505657 G6PC3Q9BUM1 346 aa6.15□□□□□ -1.42
CHD1-203ENST00000505657 ADAMTS10Q9H324 1103 aa6.15□□□□□ -1.42
CHD1-203ENST00000505657 WHRNQ9P202 907 aa6.15□□□□□ -1.42
CHD1-203ENST00000505657 ZNF281Q9Y2X9 895 aa6.15□□□□□ -1.42
CHD1-203ENST00000505657 SUSD5O60279 629 aa6.14□□□□□ -1.43
CHD1-203ENST00000505657 ZNF205O95201 554 aa6.14□□□□□ -1.43
CHD1-203ENST00000505657 ZGLP1P0C6A0 271 aa6.14□□□□□ -1.43
CHD1-203ENST00000505657 BMP8BP34820 402 aa6.14□□□□□ -1.43
CHD1-203ENST00000505657 PCBP3P57721 371 aaKnown RBP6.14□□□□□ -1.43
CHD1-203ENST00000505657 ERVFC1P60507 584 aa6.14□□□□□ -1.43
CHD1-203ENST00000505657 TCEAL1Q15170 157 aa6.14□□□□□ -1.43
CHD1-203ENST00000505657 RTP2Q5QGT7 225 aa6.14□□□□□ -1.43
CHD1-203ENST00000505657 RNF111Q6ZNA4 994 aa6.14□□□□□ -1.43
CHD1-203ENST00000505657 ADAT2Q7Z6V5 191 aaKnown RBP6.14□□□□□ -1.43
CHD1-203ENST00000505657 MCMBPQ9BTE3 642 aa6.14□□□□□ -1.43
CHD1-203ENST00000505657 GBP3Q9H0R5 595 aa6.14□□□□□ -1.43
CHD1-203ENST00000505657 CGGBP1Q9UFW8 167 aaPredicted RBP6.14□□□□□ -1.43
CHD1-203ENST00000505657 TMEM59LQ9UK28 342 aa6.14□□□□□ -1.43
CHD1-203ENST00000505657 CTNND2Q9UQB3 1225 aa6.14□□□□□ -1.43
CHD1-203ENST00000505657 R3HCC1Q9Y3T6 440 aaKnown RBP6.14□□□□□ -1.43
CHD1-203ENST00000505657 ANKRD34BA5PLL1 514 aa6.13□□□□□ -1.43
CHD1-203ENST00000505657 VAMP4O75379 141 aa6.13□□□□□ -1.43
CHD1-203ENST00000505657 GSNP06396 782 aa6.13□□□□□ -1.43
CHD1-203ENST00000505657 VAV1P15498 845 aa6.13□□□□□ -1.43
CHD1-203ENST00000505657 RPL10P27635 214 aaKnown RBP6.13□□□□□ -1.43
CHD1-203ENST00000505657 CEBPAP49715 358 aaPredicted RBP6.13□□□□□ -1.43
CHD1-203ENST00000505657 HK2P52789 917 aa6.13□□□□□ -1.43
CHD1-203ENST00000505657 MESP2Q0VG99 397 aa6.13□□□□□ -1.43
CHD1-203ENST00000505657 SF3A1Q15459 793 aaKnown RBP6.13□□□□□ -1.43
CHD1-203ENST00000505657 WAPLQ7Z5K2 1190 aa6.13□□□□□ -1.43
CHD1-203ENST00000505657 CKAP2LQ8IYA6 745 aa6.13□□□□□ -1.43
CHD1-203ENST00000505657 SLC38A3Q99624 504 aa6.13□□□□□ -1.43
CHD1-203ENST00000505657 SLC12A9Q9BXP2 914 aa6.13□□□□□ -1.43
CHD1-203ENST00000505657 PPP1R1BQ9UD71 204 aaPredicted RBP6.13□□□□□ -1.43
CHD1-203ENST00000505657 A0A087WZG4 1122 aa6.12□□□□□ -1.43
CHD1-203ENST00000505657 TBX1O43435 398 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms