RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 SAPCD2Q86UD0 394 aa4.22□□□□□ -1.73
HMGB3P17-201ENST00000504195 FAM8A1Q9UBU6 413 aa4.22□□□□□ -1.73
HMGB3P17-201ENST00000504195 USTQ9Y2C2 406 aa4.22□□□□□ -1.73
HMGB3P17-201ENST00000504195 TNFRSF18Q9Y5U5 241 aa4.22□□□□□ -1.73
HMGB3P17-201ENST00000504195 SSU72P8A0A1W2PR75 194 aa4.21□□□□□ -1.74
HMGB3P17-201ENST00000504195 FBLN1P23142 703 aa4.21□□□□□ -1.74
HMGB3P17-201ENST00000504195 LMO1P25800 156 aa4.21□□□□□ -1.74
HMGB3P17-201ENST00000504195 RTP1P59025 263 aa4.21□□□□□ -1.74
HMGB3P17-201ENST00000504195 ZNF200P98182 395 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P17-201ENST00000504195 FHL2Q14192 279 aa4.21□□□□□ -1.74
HMGB3P17-201ENST00000504195 DSC3Q14574 896 aa4.21□□□□□ -1.74
HMGB3P17-201ENST00000504195 ZC3H14Q6PJT7 736 aaKnown RBP4.21□□□□□ -1.74
HMGB3P17-201ENST00000504195 GLB1LQ6UWU2 654 aa4.21□□□□□ -1.74
HMGB3P17-201ENST00000504195 TMC7Q7Z402 723 aa4.21□□□□□ -1.74
HMGB3P17-201ENST00000504195 CARFQ8N187 725 aa4.21□□□□□ -1.74
HMGB3P17-201ENST00000504195 ZNF526Q8TF50 670 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P17-201ENST00000504195 ACSF2Q96CM8 615 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P17-201ENST00000504195 PRDM14Q9GZV8 571 aa4.21□□□□□ -1.74
HMGB3P17-201ENST00000504195 WDR33Q9C0J8 1336 aaKnown RBP4.21□□□□□ -1.74
HMGB3P17-201ENST00000504195 WTIPA6NIX2 430 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P17-201ENST00000504195 PPFIA2O75334 1257 aa4.2□□□□□ -1.74
HMGB3P17-201ENST00000504195 PLA2G1BP04054 148 aaKnown RBP4.2□□□□□ -1.74
HMGB3P17-201ENST00000504195 ENDOUP21128 410 aaKnown RBP4.2□□□□□ -1.74
HMGB3P17-201ENST00000504195 CDK8P49336 464 aa4.2□□□□□ -1.74
HMGB3P17-201ENST00000504195 PCBP3P57721 371 aaKnown RBP4.2□□□□□ -1.74
HMGB3P17-201ENST00000504195 PURAQ00577 322 aaKnown RBP4.2□□□□□ -1.74
HMGB3P17-201ENST00000504195 CBX2Q14781 532 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P17-201ENST00000504195 PLEKHN1Q494U1 663 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P17-201ENST00000504195 TBC1D10BQ4KMP7 808 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P17-201ENST00000504195 ALG1LQ6GMV1 187 aa4.2□□□□□ -1.74
HMGB3P17-201ENST00000504195 SYTL5Q8TDW5 730 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P17-201ENST00000504195 PLCD4Q9BRC7 762 aa4.2□□□□□ -1.74
HMGB3P17-201ENST00000504195 OSBPL7Q9BZF2 842 aa4.2□□□□□ -1.74
HMGB3P17-201ENST00000504195 TNFRSF10DQ9UBN6 386 aa4.2□□□□□ -1.74
HMGB3P17-201ENST00000504195 SPG7Q9UQ90 795 aa4.2□□□□□ -1.74
HMGB3P17-201ENST00000504195 ZNF536O15090 1300 aa4.2□□□□□ -1.74
HMGB3P17-201ENST00000504195 FOXO4P98177 505 aa4.19□□□□□ -1.74
HMGB3P17-201ENST00000504195 TSNAXIP1Q2TAA8 658 aa4.19□□□□□ -1.74
HMGB3P17-201ENST00000504195 RPTNQ6XPR3 784 aa4.19□□□□□ -1.74
HMGB3P17-201ENST00000504195 SLFN12Q8IYM2 578 aa4.19□□□□□ -1.74
HMGB3P17-201ENST00000504195 DAGLBQ8NCG7 672 aa4.19□□□□□ -1.74
HMGB3P17-201ENST00000504195 FAM13CQ8NE31 585 aa4.19□□□□□ -1.74
HMGB3P17-201ENST00000504195 HHIPL1Q96JK4 782 aa4.19□□□□□ -1.74
HMGB3P17-201ENST00000504195 IRS2Q9Y4H2 1338 aa4.19□□□□□ -1.74
HMGB3P17-201ENST00000504195 CARNS1A5YM72 827 aa4.18□□□□□ -1.74
HMGB3P17-201ENST00000504195 TREHO43280 583 aa4.18□□□□□ -1.74
HMGB3P17-201ENST00000504195 LRRN2O75325 713 aa4.18□□□□□ -1.74
HMGB3P17-201ENST00000504195 TNNI2P48788 182 aa4.18□□□□□ -1.74
HMGB3P17-201ENST00000504195 RGS19P49795 217 aa4.18□□□□□ -1.74
HMGB3P17-201ENST00000504195 CHMP4BP1P59074 171 aa4.18□□□□□ -1.74
HMGB3P17-201ENST00000504195 CYP4F8P98187 520 aa4.18□□□□□ -1.74
HMGB3P17-201ENST00000504195 RPL6Q02878 288 aaKnown RBP4.18□□□□□ -1.74
HMGB3P17-201ENST00000504195 MVKQ03426 396 aa4.18□□□□□ -1.74
HMGB3P17-201ENST00000504195 NR1I3Q14994 352 aa4.18□□□□□ -1.74
HMGB3P17-201ENST00000504195 TMEM201Q5SNT2 666 aa4.18□□□□□ -1.74
HMGB3P17-201ENST00000504195 USHBP1Q8N6Y0 703 aa4.18□□□□□ -1.74
HMGB3P17-201ENST00000504195 ZNF655Q8N720 491 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P17-201ENST00000504195 EAF1Q96JC9 268 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P17-201ENST00000504195 KREMEN1Q96MU8 473 aa4.18□□□□□ -1.74
HMGB3P17-201ENST00000504195 FRMD6Q96NE9 622 aa4.18□□□□□ -1.74
HMGB3P17-201ENST00000504195 MIR1-1HGQ9H1L0 117 aa4.18□□□□□ -1.74
HMGB3P17-201ENST00000504195 C12orf49Q9H741 205 aa4.18□□□□□ -1.74
HMGB3P17-201ENST00000504195 DCTN4Q9UJW0 460 aa4.18□□□□□ -1.74
HMGB3P17-201ENST00000504195 TTF2Q9UNY4 1162 aaKnown RBP4.18□□□□□ -1.74
HMGB3P17-201ENST00000504195 GTF3C3Q9Y5Q9 886 aa4.18□□□□□ -1.74
HMGB3P17-201ENST00000504195 SHISA3A0PJX4 238 aa4.17□□□□□ -1.74
HMGB3P17-201ENST00000504195 PRKCAP17252 672 aa4.17□□□□□ -1.74
HMGB3P17-201ENST00000504195 MAPKAPK2P49137 400 aa4.17□□□□□ -1.74
HMGB3P17-201ENST00000504195 TXNDC2Q86VQ3 553 aa4.17□□□□□ -1.74
HMGB3P17-201ENST00000504195 LINC00116Q8NCU8 138 aa4.17□□□□□ -1.74
HMGB3P17-201ENST00000504195 FCRL2Q96LA5 508 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P17-201ENST00000504195 CCDC74BQ96LY2 380 aa4.17□□□□□ -1.74
HMGB3P17-201ENST00000504195 ZNF341Q9BYN7 854 aa4.17□□□□□ -1.74
HMGB3P17-201ENST00000504195 FOXP3Q9BZS1 431 aa4.17□□□□□ -1.74
HMGB3P17-201ENST00000504195 TNFRSF12AQ9NP84 129 aa4.17□□□□□ -1.74
HMGB3P17-201ENST00000504195 NTMQ9P121 344 aa4.17□□□□□ -1.74
HMGB3P17-201ENST00000504195 TCFL5Q9UL49 500 aa4.17□□□□□ -1.74
HMGB3P17-201ENST00000504195 LTBP3Q9NS15 1303 aa4.17□□□□□ -1.74
HMGB3P17-201ENST00000504195 SARSP49591 514 aaKnown RBP4.16□□□□□ -1.74
HMGB3P17-201ENST00000504195 HTRA3P83110 453 aa4.16□□□□□ -1.74
HMGB3P17-201ENST00000504195 NMIQ13287 307 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P17-201ENST00000504195 SEPT6Q14141 434 aa4.16□□□□□ -1.74
HMGB3P17-201ENST00000504195 CDSNQ15517 529 aa4.16□□□□□ -1.74
HMGB3P17-201ENST00000504195 HSF5Q4G112 596 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P17-201ENST00000504195 CDCP2Q5VXM1 449 aa4.16□□□□□ -1.74
HMGB3P17-201ENST00000504195 AGMOQ6ZNB7 445 aa4.16□□□□□ -1.74
HMGB3P17-201ENST00000504195 PALM2Q8IXS6 379 aa4.16□□□□□ -1.74
HMGB3P17-201ENST00000504195 NUP43Q8NFH3 380 aa4.16□□□□□ -1.74
HMGB3P17-201ENST00000504195 TCTN2Q96GX1 697 aa4.16□□□□□ -1.74
HMGB3P17-201ENST00000504195 HDAC8Q9BY41 377 aa4.16□□□□□ -1.74
HMGB3P17-201ENST00000504195 KLC2Q9H0B6 622 aa4.16□□□□□ -1.74
HMGB3P17-201ENST00000504195 A0A1W2PQ45 241 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P17-201ENST00000504195 A0A1W2PQY0 241 aa4.15□□□□□ -1.75
HMGB3P17-201ENST00000504195 TMEM82A0PJX8 343 aa4.15□□□□□ -1.75
HMGB3P17-201ENST00000504195 FADS2P1A8MWK0 482 aa4.15□□□□□ -1.75
HMGB3P17-201ENST00000504195 FKTNO75072 461 aa4.15□□□□□ -1.75
HMGB3P17-201ENST00000504195 USP17L7P0C7H9 530 aa4.15□□□□□ -1.75
HMGB3P17-201ENST00000504195 RLBP1P12271 317 aa4.15□□□□□ -1.75
HMGB3P17-201ENST00000504195 PLCG1P19174 1290 aa4.15□□□□□ -1.75
HMGB3P17-201ENST00000504195 NANOS3P60323 173 aaKnown RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms