RNA–Protein interactions for RNA: ENST00000503324.1

SMAD1-204, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-204ENST00000503324 EXOSC10Q01780 885 aaKnown RBP20.78■□□□□ 0.92
SMAD1-204ENST00000503324 C8orf34Q49A92 452 aa20.78■□□□□ 0.92
SMAD1-204ENST00000503324 TNS4Q8IZW8 715 aa20.78■□□□□ 0.92
SMAD1-204ENST00000503324 TMEM87BQ96K49 555 aa20.78■□□□□ 0.92
SMAD1-204ENST00000503324 GPCPD1Q9NPB8 672 aa20.78■□□□□ 0.92
SMAD1-204ENST00000503324 GABRQQ9UN88 632 aa20.78■□□□□ 0.92
SMAD1-204ENST00000503324 WDR19Q8NEZ3 1342 aa20.78■□□□□ 0.92
SMAD1-204ENST00000503324 SEC24BO95487 1268 aa20.77■□□□□ 0.92
SMAD1-204ENST00000503324 HOXD10P28358 340 aa20.77■□□□□ 0.92
SMAD1-204ENST00000503324 SLC16A2P36021 539 aa20.77■□□□□ 0.92
SMAD1-204ENST00000503324 PRMT2P55345 433 aa20.77■□□□□ 0.92
SMAD1-204ENST00000503324 PRKCZQ05513 592 aa20.77■□□□□ 0.92
SMAD1-204ENST00000503324 GPR142Q7Z601 462 aa20.77■□□□□ 0.92
SMAD1-204ENST00000503324 SHCBP1Q8NEM2 672 aa20.77■□□□□ 0.92
SMAD1-204ENST00000503324 PRR12Q9ULL5 1215 aa20.77■□□□□ 0.92
SMAD1-204ENST00000503324 PTCH2Q9Y6C5 1203 aa20.77■□□□□ 0.92
SMAD1-204ENST00000503324 ATP2A1O14983 1001 aa20.76■□□□□ 0.91
SMAD1-204ENST00000503324 ZBED4O75132 1171 aa20.76■□□□□ 0.91
SMAD1-204ENST00000503324 GOLGA8HP0CJ92 632 aa20.76■□□□□ 0.91
SMAD1-204ENST00000503324 IKQ13123 557 aaPredicted RBP20.76■□□□□ 0.91
SMAD1-204ENST00000503324 PLS1Q14651 629 aa20.76■□□□□ 0.91
SMAD1-204ENST00000503324 GPATCH4Q5T3I0 446 aaKnown RBP20.76■□□□□ 0.91
SMAD1-204ENST00000503324 DHX32Q7L7V1 743 aaKnown RBP20.76■□□□□ 0.91
SMAD1-204ENST00000503324 RIOX2Q8IUF8 465 aa20.76■□□□□ 0.91
SMAD1-204ENST00000503324 COA7Q96BR5 231 aa20.76■□□□□ 0.91
SMAD1-204ENST00000503324 LRRC2Q9BYS8 371 aa20.76■□□□□ 0.91
SMAD1-204ENST00000503324 GJD2Q9UKL4 321 aa20.76■□□□□ 0.91
SMAD1-204ENST00000503324 DOCK3Q8IZD9 2030 aa20.76■□□□□ 0.91
SMAD1-204ENST00000503324 PLXNB2O15031 1838 aa20.76■□□□□ 0.91
SMAD1-204ENST00000503324 FDX1P10109 184 aa20.75■□□□□ 0.91
SMAD1-204ENST00000503324 ERCC3P19447 782 aa20.75■□□□□ 0.91
SMAD1-204ENST00000503324 STAT3P40763 770 aa20.75■□□□□ 0.91
SMAD1-204ENST00000503324 LIFRP42702 1097 aa20.75■□□□□ 0.91
SMAD1-204ENST00000503324 TROAPQ12815 778 aa20.75■□□□□ 0.91
SMAD1-204ENST00000503324 SYDE2Q5VT97 1194 aa20.75■□□□□ 0.91
SMAD1-204ENST00000503324 PLEKHH3Q7Z736 793 aa20.75■□□□□ 0.91
SMAD1-204ENST00000503324 TCEANC2Q96MN5 208 aa20.75■□□□□ 0.91
SMAD1-204ENST00000503324 JAKMIP1Q96N16 626 aaKnown RBP20.75■□□□□ 0.91
SMAD1-204ENST00000503324 ZNF536O15090 1300 aa20.75■□□□□ 0.91
SMAD1-204ENST00000503324 HMGB1P09429 215 aaKnown RBP20.74■□□□□ 0.91
SMAD1-204ENST00000503324 CPA1P15085 419 aa20.74■□□□□ 0.91
SMAD1-204ENST00000503324 FLT3LGP49771 235 aa20.74■□□□□ 0.91
SMAD1-204ENST00000503324 ASPRV1Q53RT3 343 aa20.74■□□□□ 0.91
SMAD1-204ENST00000503324 MORN1Q5T089 497 aa20.74■□□□□ 0.91
SMAD1-204ENST00000503324 CCAR1Q8IX12 1150 aaKnown RBP20.74■□□□□ 0.91
SMAD1-204ENST00000503324 USP6NLQ92738 828 aa20.74■□□□□ 0.91
SMAD1-204ENST00000503324 TEX13BQ9BXU2 312 aa20.74■□□□□ 0.91
SMAD1-204ENST00000503324 RANBP17Q9H2T7 1088 aaKnown RBP20.74■□□□□ 0.91
SMAD1-204ENST00000503324 CPVLQ9H3G5 476 aa20.74■□□□□ 0.91
SMAD1-204ENST00000503324 RAVER2Q9HCJ3 691 aaKnown RBP20.74■□□□□ 0.91
SMAD1-204ENST00000503324 HPS5Q9UPZ3 1129 aa20.74■□□□□ 0.91
SMAD1-204ENST00000503324 RIPK3Q9Y572 518 aa20.74■□□□□ 0.91
SMAD1-204ENST00000503324 SLC25A27O95847 323 aa20.73■□□□□ 0.91
SMAD1-204ENST00000503324 PARP1P09874 1014 aaKnown RBP20.73■□□□□ 0.91
SMAD1-204ENST00000503324 PTPREP23469 700 aa20.73■□□□□ 0.91
SMAD1-204ENST00000503324 OAZ1P54368 228 aa20.73■□□□□ 0.91
SMAD1-204ENST00000503324 SNAP25P60880 206 aa20.73■□□□□ 0.91
SMAD1-204ENST00000503324 GRM4Q14833 912 aa20.73■□□□□ 0.91
SMAD1-204ENST00000503324 SNRNP48Q6IEG0 339 aaKnown RBP20.73■□□□□ 0.91
SMAD1-204ENST00000503324 ZNF654Q8IZM8 581 aa20.73■□□□□ 0.91
SMAD1-204ENST00000503324 CPXCR1Q8N123 301 aa20.73■□□□□ 0.91
SMAD1-204ENST00000503324 STAG2Q8N3U4 1231 aa20.73■□□□□ 0.91
SMAD1-204ENST00000503324 UBA5Q9GZZ9 404 aa20.73■□□□□ 0.91
SMAD1-204ENST00000503324 MROH8Q9H579 483 aa20.73■□□□□ 0.91
SMAD1-204ENST00000503324 MAD2L2Q9UI95 211 aa20.73■□□□□ 0.91
SMAD1-204ENST00000503324 PALM3A6NDB9 673 aaPredicted RBP20.72■□□□□ 0.91
SMAD1-204ENST00000503324 IRF5Q13568 498 aa20.72■□□□□ 0.91
SMAD1-204ENST00000503324 GRB14Q14449 540 aa20.72■□□□□ 0.91
SMAD1-204ENST00000503324 WDR78Q5VTH9 848 aa20.72■□□□□ 0.91
SMAD1-204ENST00000503324 CATIPQ7Z7H3 387 aa20.72■□□□□ 0.91
SMAD1-204ENST00000503324 SGMS1Q86VZ5 419 aa20.72■□□□□ 0.91
SMAD1-204ENST00000503324 NCAPG2Q86XI2 1143 aa20.72■□□□□ 0.91
SMAD1-204ENST00000503324 TMTC2Q8N394 836 aa20.72■□□□□ 0.91
SMAD1-204ENST00000503324 ABHD8Q96I13 439 aa20.72■□□□□ 0.91
SMAD1-204ENST00000503324 SLC15A5A6NIM6 579 aa20.71■□□□□ 0.91
SMAD1-204ENST00000503324 EIF5BO60841 1220 aaKnown RBP20.71■□□□□ 0.91
SMAD1-204ENST00000503324 DDAH1O94760 285 aa20.71■□□□□ 0.91
SMAD1-204ENST00000503324 BLOC1S2Q6QNY1 142 aa20.71■□□□□ 0.91
SMAD1-204ENST00000503324 RAET1EQ8TD07 263 aa20.71■□□□□ 0.91
SMAD1-204ENST00000503324 SOCS4Q8WXH5 440 aa20.71■□□□□ 0.91
SMAD1-204ENST00000503324 AGBL1Q96MI9 1066 aa20.71■□□□□ 0.91
SMAD1-204ENST00000503324 NUDT12Q9BQG2 462 aa20.71■□□□□ 0.91
SMAD1-204ENST00000503324 MYL10Q9BUA6 226 aa20.71■□□□□ 0.91
SMAD1-204ENST00000503324 CTDP1Q9Y5B0 961 aaPredicted RBP20.71■□□□□ 0.91
SMAD1-204ENST00000503324 ZNF236Q9UL36 1845 aa20.7■□□□□ 0.9
SMAD1-204ENST00000503324 CCDC69A6NI79 296 aa20.7■□□□□ 0.9
SMAD1-204ENST00000503324 CASTP20810 708 aaKnown RBP20.7■□□□□ 0.9
SMAD1-204ENST00000503324 RPS6KB1P23443 525 aa20.7■□□□□ 0.9
SMAD1-204ENST00000503324 PSMA5P28066 241 aa20.7■□□□□ 0.9
SMAD1-204ENST00000503324 COPB2P35606 906 aa20.7■□□□□ 0.9
SMAD1-204ENST00000503324 SLC35G1Q2M3R5 365 aa20.7■□□□□ 0.9
SMAD1-204ENST00000503324 CCDC174Q6PII3 467 aa20.7■□□□□ 0.9
SMAD1-204ENST00000503324 NFXL1Q6ZNB6 911 aa20.7■□□□□ 0.9
SMAD1-204ENST00000503324 MAP3K14Q99558 947 aa20.7■□□□□ 0.9
SMAD1-204ENST00000503324 TM6SF1Q9BZW5 370 aa20.7■□□□□ 0.9
SMAD1-204ENST00000503324 CWC22Q9HCG8 908 aaKnown RBP20.7■□□□□ 0.9
SMAD1-204ENST00000503324 ZSWIM6Q9HCJ5 1215 aa20.7■□□□□ 0.9
SMAD1-204ENST00000503324 KLRF2D3W0D1 207 aa20.69■□□□□ 0.9
SMAD1-204ENST00000503324 STRNO43815 780 aa20.69■□□□□ 0.9
SMAD1-204ENST00000503324 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms