RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 NT5C2P49902 561 aa9.84□□□□□ -0.84
VPS13B-206ENST00000496144 NFIAQ12857 509 aa9.84□□□□□ -0.84
VPS13B-206ENST00000496144 BRCA1P38398 1863 aaKnown RBP9.83□□□□□ -0.84
VPS13B-206ENST00000496144 FAM196BA6NMK8 535 aa9.83□□□□□ -0.84
VPS13B-206ENST00000496144 KIF28PB7ZC32 967 aa9.83□□□□□ -0.84
VPS13B-206ENST00000496144 MAP2K5Q13163 448 aa9.83□□□□□ -0.84
VPS13B-206ENST00000496144 MCF2L2Q86YR7 1114 aa9.83□□□□□ -0.84
VPS13B-206ENST00000496144 ZIC5Q96T25 663 aa9.83□□□□□ -0.84
VPS13B-206ENST00000496144 AFG3L2Q9Y4W6 797 aa9.83□□□□□ -0.84
VPS13B-206ENST00000496144 MAST2Q6P0Q8 1798 aa9.83□□□□□ -0.84
VPS13B-206ENST00000496144 SYCE3A1L190 88 aa9.83□□□□□ -0.84
VPS13B-206ENST00000496144 PTPDC1A2A3K4 754 aa9.83□□□□□ -0.84
VPS13B-206ENST00000496144 EXOSC10Q01780 885 aaKnown RBP9.83□□□□□ -0.84
VPS13B-206ENST00000496144 FAM47CQ5HY64 1035 aa9.83□□□□□ -0.84
VPS13B-206ENST00000496144 FAM198AQ9UFP1 575 aa9.83□□□□□ -0.84
VPS13B-206ENST00000496144 KIAA1551Q9HCM1 1747 aa9.83□□□□□ -0.84
VPS13B-206ENST00000496144 CCDC69A6NI79 296 aa9.83□□□□□ -0.84
VPS13B-206ENST00000496144 TTLL1O95922 423 aa9.83□□□□□ -0.84
VPS13B-206ENST00000496144 U2AF1L4Q8WU68 220 aaKnown RBP9.83□□□□□ -0.84
VPS13B-206ENST00000496144 MROH7Q68CQ1 1323 aa9.83□□□□□ -0.84
VPS13B-206ENST00000496144 UBE2HP62256 183 aa9.83□□□□□ -0.84
VPS13B-206ENST00000496144 SLFN13Q68D06 897 aa9.83□□□□□ -0.84
VPS13B-206ENST00000496144 CPLX2Q6PUV4 134 aaKnown RBP9.83□□□□□ -0.84
VPS13B-206ENST00000496144 PIH1D3Q9NQM4 214 aaKnown RBP9.83□□□□□ -0.84
VPS13B-206ENST00000496144 E7EWF7 191 aa9.82□□□□□ -0.84
VPS13B-206ENST00000496144 PRKAR2AP13861 404 aaKnown RBP9.82□□□□□ -0.84
VPS13B-206ENST00000496144 STAT3P40763 770 aa9.82□□□□□ -0.84
VPS13B-206ENST00000496144 OSBP2Q969R2 916 aa9.82□□□□□ -0.84
VPS13B-206ENST00000496144 AGXT2Q9BYV1 514 aa9.82□□□□□ -0.84
VPS13B-206ENST00000496144 GDPD2Q9HCC8 539 aa9.82□□□□□ -0.84
VPS13B-206ENST00000496144 TCHHQ07283 1943 aa9.82□□□□□ -0.84
VPS13B-206ENST00000496144 USP17L12C9JPN9 530 aa9.82□□□□□ -0.84
VPS13B-206ENST00000496144 USP17L21D6R901 530 aa9.82□□□□□ -0.84
VPS13B-206ENST00000496144 PFKFB2O60825 505 aa9.82□□□□□ -0.84
VPS13B-206ENST00000496144 GIMAP6Q6P9H5 292 aa9.82□□□□□ -0.84
VPS13B-206ENST00000496144 FBXL16Q8N461 479 aa9.82□□□□□ -0.84
VPS13B-206ENST00000496144 TCEANC2Q96MN5 208 aa9.82□□□□□ -0.84
VPS13B-206ENST00000496144 PATL2C9JE40 543 aaKnown RBP9.82□□□□□ -0.84
VPS13B-206ENST00000496144 FOXP2O15409 715 aa9.82□□□□□ -0.84
VPS13B-206ENST00000496144 LETM1O95202 739 aaPredicted RBP9.82□□□□□ -0.84
VPS13B-206ENST00000496144 CNKSR2Q8WXI2 1034 aa9.82□□□□□ -0.84
VPS13B-206ENST00000496144 KIAA1683Q9H0B3 1180 aa9.82□□□□□ -0.84
VPS13B-206ENST00000496144 MSRAQ9UJ68 235 aa9.82□□□□□ -0.84
VPS13B-206ENST00000496144 PCDHAC2Q9Y5I4 1007 aa9.82□□□□□ -0.84
VPS13B-206ENST00000496144 NSMFQ6X4W1 530 aa9.82□□□□□ -0.84
VPS13B-206ENST00000496144 TSPY26PQ9H489 355 aa9.82□□□□□ -0.84
VPS13B-206ENST00000496144 RRAGDQ9NQL2 400 aaPredicted RBP9.82□□□□□ -0.84
VPS13B-206ENST00000496144 ZNF112Q9UJU3 913 aa9.82□□□□□ -0.84
VPS13B-206ENST00000496144 KIF5BP33176 963 aa9.81□□□□□ -0.84
VPS13B-206ENST00000496144 SCRN1Q12765 414 aa9.81□□□□□ -0.84
VPS13B-206ENST00000496144 STK3Q13188 491 aa9.81□□□□□ -0.84
VPS13B-206ENST00000496144 SEPT2Q15019 361 aa9.81□□□□□ -0.84
VPS13B-206ENST00000496144 FOXD4L6Q3SYB3 417 aaPredicted RBP9.81□□□□□ -0.84
VPS13B-206ENST00000496144 CCDC183Q5T5S1 534 aa9.81□□□□□ -0.84
VPS13B-206ENST00000496144 LARP1BQ659C4 914 aaKnown RBP9.81□□□□□ -0.84
VPS13B-206ENST00000496144 FOXD4L3Q6VB84 417 aaPredicted RBP9.81□□□□□ -0.84
VPS13B-206ENST00000496144 DHX32Q7L7V1 743 aaKnown RBP9.81□□□□□ -0.84
VPS13B-206ENST00000496144 LLPHQ9BRT6 129 aaKnown RBP9.81□□□□□ -0.84
VPS13B-206ENST00000496144 ALAS1P13196 640 aa9.81□□□□□ -0.84
VPS13B-206ENST00000496144 CDK8P49336 464 aa9.81□□□□□ -0.84
VPS13B-206ENST00000496144 SHCBP1Q8NEM2 672 aa9.81□□□□□ -0.84
VPS13B-206ENST00000496144 SMARCC2Q8TAQ2 1214 aa9.81□□□□□ -0.84
VPS13B-206ENST00000496144 ARMC5Q96C12 935 aa9.81□□□□□ -0.84
VPS13B-206ENST00000496144 GAS2L1Q99501 681 aaPredicted RBP9.81□□□□□ -0.84
VPS13B-206ENST00000496144 DDTLA6NHG4 134 aaPredicted RBP9.81□□□□□ -0.84
VPS13B-206ENST00000496144 BMP3P12645 472 aa9.81□□□□□ -0.84
VPS13B-206ENST00000496144 ELNP15502 786 aa9.81□□□□□ -0.84
VPS13B-206ENST00000496144 PDCP20941 246 aa9.81□□□□□ -0.84
VPS13B-206ENST00000496144 STAT2P52630 851 aa9.81□□□□□ -0.84
VPS13B-206ENST00000496144 DNM1Q05193 864 aaKnown RBP9.81□□□□□ -0.84
VPS13B-206ENST00000496144 GLT1D1Q96MS3 346 aa9.81□□□□□ -0.84
VPS13B-206ENST00000496144 SENP6Q9GZR1 1112 aaPredicted RBP9.81□□□□□ -0.84
VPS13B-206ENST00000496144 HOMER2Q9NSB8 354 aa9.81□□□□□ -0.84
VPS13B-206ENST00000496144 RNF216Q9NWF9 866 aaPredicted RBP9.81□□□□□ -0.84
VPS13B-206ENST00000496144 SGPL1O95470 568 aa9.81□□□□□ -0.84
VPS13B-206ENST00000496144 PCP11498 1178 aaKnown RBP9.81□□□□□ -0.84
VPS13B-206ENST00000496144 IRF5Q13568 498 aa9.81□□□□□ -0.84
VPS13B-206ENST00000496144 CHST13Q8NET6 341 aa9.81□□□□□ -0.84
VPS13B-206ENST00000496144 GPR142Q7Z601 462 aa9.81□□□□□ -0.84
VPS13B-206ENST00000496144 CCPG1Q9ULG6 757 aa9.81□□□□□ -0.84
VPS13B-206ENST00000496144 RAG1P15918 1043 aa9.8□□□□□ -0.84
VPS13B-206ENST00000496144 ZNF76P36508 570 aa9.8□□□□□ -0.84
VPS13B-206ENST00000496144 SNRNP48Q6IEG0 339 aaKnown RBP9.8□□□□□ -0.84
VPS13B-206ENST00000496144 CCDC43Q96MW1 224 aaKnown RBP9.8□□□□□ -0.84
VPS13B-206ENST00000496144 ELP1O95163 1332 aa9.8□□□□□ -0.84
VPS13B-206ENST00000496144 ADD2P35612 726 aa9.8□□□□□ -0.84
VPS13B-206ENST00000496144 CATIPQ7Z7H3 387 aa9.8□□□□□ -0.84
VPS13B-206ENST00000496144 SPICE1Q8N0Z3 855 aa9.8□□□□□ -0.84
VPS13B-206ENST00000496144 P2RX7Q99572 595 aaKnown RBP9.8□□□□□ -0.84
VPS13B-206ENST00000496144 SEZ6LQ9BYH1 1024 aa9.8□□□□□ -0.84
VPS13B-206ENST00000496144 VPS37CA5D8V6 355 aaPredicted RBP9.8□□□□□ -0.84
VPS13B-206ENST00000496144 ZNF697Q5TEC3 545 aa9.8□□□□□ -0.84
VPS13B-206ENST00000496144 CTCFLQ8NI51 663 aaPredicted RBP9.8□□□□□ -0.84
VPS13B-206ENST00000496144 PUS7LQ9H0K6 701 aaKnown RBP9.8□□□□□ -0.84
VPS13B-206ENST00000496144 TMEM39AQ9NV64 488 aa9.8□□□□□ -0.84
VPS13B-206ENST00000496144 LAMB1P07942 1786 aa9.8□□□□□ -0.84
VPS13B-206ENST00000496144 ZBBXA8MT70 800 aa9.8□□□□□ -0.84
VPS13B-206ENST00000496144 SKIV2LQ15477 1246 aaKnown RBP9.8□□□□□ -0.84
VPS13B-206ENST00000496144 C17orf99Q6UX52 265 aa9.8□□□□□ -0.84
VPS13B-206ENST00000496144 PRPF38AQ8NAV1 312 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms