RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 ASPRV1Q53RT3 343 aa11.78□□□□□ -0.52
HDAC3-214ENST00000495485 ANO1Q5XXA6 986 aa11.78□□□□□ -0.52
HDAC3-214ENST00000495485 ADALQ6DHV7 355 aa11.78□□□□□ -0.52
HDAC3-214ENST00000495485 OTUD7BQ6GQQ9 843 aa11.78□□□□□ -0.52
HDAC3-214ENST00000495485 FAM173BQ6P4H8 233 aa11.78□□□□□ -0.52
HDAC3-214ENST00000495485 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.78□□□□□ -0.52
HDAC3-214ENST00000495485 ZFPM1Q8IX07 1006 aa11.78□□□□□ -0.52
HDAC3-214ENST00000495485 DIS3L2Q8IYB7 885 aaKnown RBP11.78□□□□□ -0.52
HDAC3-214ENST00000495485 DNAJC5GQ8N7S2 189 aa11.78□□□□□ -0.52
HDAC3-214ENST00000495485 ZNF713Q8N859 430 aaPredicted RBP11.78□□□□□ -0.52
HDAC3-214ENST00000495485 NUP62CLQ9H1M0 184 aa11.78□□□□□ -0.52
HDAC3-214ENST00000495485 TSPY26PQ9H489 355 aa11.78□□□□□ -0.52
HDAC3-214ENST00000495485 GRPEL1Q9HAV7 217 aa11.78□□□□□ -0.52
HDAC3-214ENST00000495485 AS3MTQ9HBK9 375 aa11.78□□□□□ -0.52
HDAC3-214ENST00000495485 ZCCHC17Q9NP64 241 aaKnown RBP11.78□□□□□ -0.52
HDAC3-214ENST00000495485 CABP5Q9NP86 173 aa11.78□□□□□ -0.52
HDAC3-214ENST00000495485 IL17RBQ9NRM6 502 aa11.78□□□□□ -0.52
HDAC3-214ENST00000495485 SEC63Q9UGP8 760 aaKnown RBP11.78□□□□□ -0.52
HDAC3-214ENST00000495485 SCAF8Q9UPN6 1271 aaKnown RBP11.78□□□□□ -0.52
HDAC3-214ENST00000495485 PTPRFP10586 1907 aa11.78□□□□□ -0.52
HDAC3-214ENST00000495485 CXCL11O14625 94 aa11.77□□□□□ -0.53
HDAC3-214ENST00000495485 PPP6R2O75170 966 aa11.77□□□□□ -0.53
HDAC3-214ENST00000495485 ALDH1A1P00352 501 aa11.77□□□□□ -0.53
HDAC3-214ENST00000495485 CAP2P40123 477 aa11.77□□□□□ -0.53
HDAC3-214ENST00000495485 NOVP48745 357 aa11.77□□□□□ -0.53
HDAC3-214ENST00000495485 GTF2A2P52657 109 aa11.77□□□□□ -0.53
HDAC3-214ENST00000495485 NLRP5P59047 1200 aa11.77□□□□□ -0.53
HDAC3-214ENST00000495485 CEBPZQ03701 1054 aaKnown RBP11.77□□□□□ -0.53
HDAC3-214ENST00000495485 VGLL4Q14135 290 aa11.77□□□□□ -0.53
HDAC3-214ENST00000495485 SLC39A14Q15043 492 aa11.77□□□□□ -0.53
HDAC3-214ENST00000495485 PFKFB3Q16875 520 aaPredicted RBP11.77□□□□□ -0.53
HDAC3-214ENST00000495485 CERKLQ49MI3 558 aaPredicted RBP11.77□□□□□ -0.53
HDAC3-214ENST00000495485 GPATCH4Q5T3I0 446 aaKnown RBP11.77□□□□□ -0.53
HDAC3-214ENST00000495485 SPRYD7Q5W111 196 aa11.77□□□□□ -0.53
HDAC3-214ENST00000495485 PAXIP1Q6ZW49 1069 aaPredicted RBP11.77□□□□□ -0.53
HDAC3-214ENST00000495485 MIGA2Q7L4E1 593 aa11.77□□□□□ -0.53
HDAC3-214ENST00000495485 RASAL3Q86YV0 1011 aa11.77□□□□□ -0.53
HDAC3-214ENST00000495485 LINC00301Q8NCQ3 95 aa11.77□□□□□ -0.53
HDAC3-214ENST00000495485 RRP36Q96EU6 259 aaKnown RBP11.77□□□□□ -0.53
HDAC3-214ENST00000495485 CCDC34Q96HJ3 373 aa11.77□□□□□ -0.53
HDAC3-214ENST00000495485 CHAMP1Q96JM3 812 aa11.77□□□□□ -0.53
HDAC3-214ENST00000495485 USP28Q96RU2 1077 aa11.77□□□□□ -0.53
HDAC3-214ENST00000495485 PHF20Q9BVI0 1012 aa11.77□□□□□ -0.53
HDAC3-214ENST00000495485 SPZ1Q9BXG8 430 aa11.77□□□□□ -0.53
HDAC3-214ENST00000495485 KANSL2Q9H9L4 492 aa11.77□□□□□ -0.53
HDAC3-214ENST00000495485 MTMR4Q9NYA4 1195 aa11.77□□□□□ -0.53
HDAC3-214ENST00000495485 SYCE3A1L190 88 aa11.76□□□□□ -0.53
HDAC3-214ENST00000495485 KLRF2D3W0D1 207 aa11.76□□□□□ -0.53
HDAC3-214ENST00000495485 SMIM22K7EJ46 135 aa11.76□□□□□ -0.53
HDAC3-214ENST00000495485 MPHOSPH10O00566 681 aaKnown RBP11.76□□□□□ -0.53
HDAC3-214ENST00000495485 PLEKHA8P1O95397 391 aa11.76□□□□□ -0.53
HDAC3-214ENST00000495485 CCDC192P0DO97 292 aa11.76□□□□□ -0.53
HDAC3-214ENST00000495485 VEGFBP49765 207 aa11.76□□□□□ -0.53
HDAC3-214ENST00000495485 PRKG1Q13976 671 aa11.76□□□□□ -0.53
HDAC3-214ENST00000495485 DLK2Q6UY11 383 aa11.76□□□□□ -0.53
HDAC3-214ENST00000495485 CDAN1Q8IWY9 1227 aa11.76□□□□□ -0.53
HDAC3-214ENST00000495485 CCAR1Q8IX12 1150 aaKnown RBP11.76□□□□□ -0.53
HDAC3-214ENST00000495485 SRBD1Q8N5C6 995 aaKnown RBP11.76□□□□□ -0.53
HDAC3-214ENST00000495485 SLC44A5Q8NCS7 719 aa11.76□□□□□ -0.53
HDAC3-214ENST00000495485 CEP95Q96GE4 821 aa11.76□□□□□ -0.53
HDAC3-214ENST00000495485 WNK4Q96J92 1243 aa11.76□□□□□ -0.53
HDAC3-214ENST00000495485 AIFM3Q96NN9 605 aa11.76□□□□□ -0.53
HDAC3-214ENST00000495485 BEGAINQ9BUH8 593 aa11.76□□□□□ -0.53
HDAC3-214ENST00000495485 TNMDQ9H2S6 317 aa11.76□□□□□ -0.53
HDAC3-214ENST00000495485 SYNPO2Q9UMS6 1093 aa11.76□□□□□ -0.53
HDAC3-214ENST00000495485 KCNH4Q9UQ05 1017 aa11.76□□□□□ -0.53
HDAC3-214ENST00000495485 CNTNAP5Q8WYK1 1306 aa11.76□□□□□ -0.53
HDAC3-214ENST00000495485 PHIPQ8WWQ0 1821 aa11.76□□□□□ -0.53
HDAC3-214ENST00000495485 PALM3A6NDB9 673 aaPredicted RBP11.75□□□□□ -0.53
HDAC3-214ENST00000495485 USP17L5A8MUK1 530 aa11.75□□□□□ -0.53
HDAC3-214ENST00000495485 FAM155AB1AL88 458 aaPredicted RBP11.75□□□□□ -0.53
HDAC3-214ENST00000495485 KINO60870 393 aaKnown RBP11.75□□□□□ -0.53
HDAC3-214ENST00000495485 CUTAO60888 179 aa11.75□□□□□ -0.53
HDAC3-214ENST00000495485 CAVIN2O95810 425 aa11.75□□□□□ -0.53
HDAC3-214ENST00000495485 GNA11P29992 359 aa11.75□□□□□ -0.53
HDAC3-214ENST00000495485 TM4SF4P48230 202 aa11.75□□□□□ -0.53
HDAC3-214ENST00000495485 TRAPPC10P48553 1259 aa11.75□□□□□ -0.53
HDAC3-214ENST00000495485 FUT2Q10981 343 aa11.75□□□□□ -0.53
HDAC3-214ENST00000495485 SNAPC2Q13487 334 aa11.75□□□□□ -0.53
HDAC3-214ENST00000495485 ZRSR1Q15695 479 aaKnown RBP11.75□□□□□ -0.53
HDAC3-214ENST00000495485 PKN1Q16512 942 aa11.75□□□□□ -0.53
HDAC3-214ENST00000495485 TPRNQ4KMQ1 711 aa11.75□□□□□ -0.53
HDAC3-214ENST00000495485 TMEM179Q6ZVK1 233 aa11.75□□□□□ -0.53
HDAC3-214ENST00000495485 MRPS27Q92552 414 aaKnown RBP11.75□□□□□ -0.53
HDAC3-214ENST00000495485 WDR18Q9BV38 432 aa11.75□□□□□ -0.53
HDAC3-214ENST00000495485 SH2D4AQ9H788 454 aa11.75□□□□□ -0.53
HDAC3-214ENST00000495485 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.75□□□□□ -0.53
HDAC3-214ENST00000495485 SAGE1Q9NXZ1 904 aa11.75□□□□□ -0.53
HDAC3-214ENST00000495485 NYAP2Q9P242 653 aa11.75□□□□□ -0.53
HDAC3-214ENST00000495485 CLIP2Q9UDT6 1046 aa11.75□□□□□ -0.53
HDAC3-214ENST00000495485 MAD2L2Q9UI95 211 aa11.75□□□□□ -0.53
HDAC3-214ENST00000495485 SNCAIPQ9Y6H5 919 aa11.75□□□□□ -0.53
HDAC3-214ENST00000495485 MORC2Q9Y6X9 1032 aaPredicted RBP11.75□□□□□ -0.53
HDAC3-214ENST00000495485 IGKV6D-41A0A0C4DH26 115 aa11.74□□□□□ -0.53
HDAC3-214ENST00000495485 TESPA1A2RU30 521 aaPredicted RBP11.74□□□□□ -0.53
HDAC3-214ENST00000495485 BTBD18B2RXH4 712 aa11.74□□□□□ -0.53
HDAC3-214ENST00000495485 C19orf81C9J6K1 198 aa11.74□□□□□ -0.53
HDAC3-214ENST00000495485 CETPP11597 493 aa11.74□□□□□ -0.53
HDAC3-214ENST00000495485 PTPRAP18433 802 aa11.74□□□□□ -0.53
HDAC3-214ENST00000495485 INPP5BP32019 993 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms