RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 PARP1P09874 1014 aaKnown RBP14.58□□□□□ -0.08
TRA2A-209ENST00000494255 PKN2Q16513 984 aaKnown RBP14.58□□□□□ -0.08
TRA2A-209ENST00000494255 Q3C1V9 767 aa14.58□□□□□ -0.08
TRA2A-209ENST00000494255 COL13A1Q5TAT6 717 aaPredicted RBP14.58□□□□□ -0.08
TRA2A-209ENST00000494255 POTEEQ6S8J3 1075 aa14.58□□□□□ -0.08
TRA2A-209ENST00000494255 COA7Q96BR5 231 aa14.58□□□□□ -0.08
TRA2A-209ENST00000494255 TRIM47Q96LD4 638 aa14.58□□□□□ -0.08
TRA2A-209ENST00000494255 LRRC2Q9BYS8 371 aa14.58□□□□□ -0.08
TRA2A-209ENST00000494255 SPATC1LQ9H0A9 340 aa14.58□□□□□ -0.08
TRA2A-209ENST00000494255 ZSWIM8A7E2V4 1837 aa14.58□□□□□ -0.08
TRA2A-209ENST00000494255 COL11A1P12107 1806 aaPredicted RBP14.58□□□□□ -0.08
TRA2A-209ENST00000494255 CASTP20810 708 aaKnown RBP14.57□□□□□ -0.08
TRA2A-209ENST00000494255 LIFRP42702 1097 aa14.57□□□□□ -0.08
TRA2A-209ENST00000494255 EXOSC10Q01780 885 aaKnown RBP14.57□□□□□ -0.08
TRA2A-209ENST00000494255 SYDE2Q5VT97 1194 aa14.57□□□□□ -0.08
TRA2A-209ENST00000494255 WDR78Q5VTH9 848 aa14.57□□□□□ -0.08
TRA2A-209ENST00000494255 TTBK2Q6IQ55 1244 aa14.57□□□□□ -0.08
TRA2A-209ENST00000494255 BTNL9Q6UXG8 535 aa14.57□□□□□ -0.08
TRA2A-209ENST00000494255 SENP2Q9HC62 589 aa14.57□□□□□ -0.08
TRA2A-209ENST00000494255 SEC24BO95487 1268 aa14.56□□□□□ -0.08
TRA2A-209ENST00000494255 GOLGA8HP0CJ92 632 aa14.56□□□□□ -0.08
TRA2A-209ENST00000494255 CTGFP29279 349 aa14.56□□□□□ -0.08
TRA2A-209ENST00000494255 COPB2P35606 906 aa14.56□□□□□ -0.08
TRA2A-209ENST00000494255 SLC16A2P36021 539 aa14.56□□□□□ -0.08
TRA2A-209ENST00000494255 PRMT2P55345 433 aa14.56□□□□□ -0.08
TRA2A-209ENST00000494255 COL9A3Q14050 684 aaPredicted RBP14.56□□□□□ -0.08
TRA2A-209ENST00000494255 TMEM132BQ14DG7 1078 aa14.56□□□□□ -0.08
TRA2A-209ENST00000494255 SYNE3Q6ZMZ3 975 aa14.56□□□□□ -0.08
TRA2A-209ENST00000494255 TCEANC2Q96MN5 208 aa14.56□□□□□ -0.08
TRA2A-209ENST00000494255 MOV10L1Q9BXT6 1211 aaKnown RBP14.56□□□□□ -0.08
TRA2A-209ENST00000494255 SLC38A10Q9HBR0 1119 aa14.56□□□□□ -0.08
TRA2A-209ENST00000494255 GPHNQ9NQX3 736 aaPredicted RBP14.56□□□□□ -0.08
TRA2A-209ENST00000494255 PRR12Q9ULL5 1215 aa14.56□□□□□ -0.08
TRA2A-209ENST00000494255 IVNS1ABPQ9Y6Y0 642 aa14.56□□□□□ -0.08
TRA2A-209ENST00000494255 DDAH1O94760 285 aa14.55□□□□□ -0.08
TRA2A-209ENST00000494255 SLC25A27O95847 323 aa14.55□□□□□ -0.08
TRA2A-209ENST00000494255 RPS6KB1P23443 525 aa14.55□□□□□ -0.08
TRA2A-209ENST00000494255 STAT3P40763 770 aa14.55□□□□□ -0.08
TRA2A-209ENST00000494255 ANAPC15P60006 121 aa14.55□□□□□ -0.08
TRA2A-209ENST00000494255 CAP1Q01518 475 aa14.55□□□□□ -0.08
TRA2A-209ENST00000494255 GRM4Q14833 912 aa14.55□□□□□ -0.08
TRA2A-209ENST00000494255 NCAPG2Q86XI2 1143 aa14.55□□□□□ -0.08
TRA2A-209ENST00000494255 ZNF654Q8IZM8 581 aa14.55□□□□□ -0.08
TRA2A-209ENST00000494255 CPXCR1Q8N123 301 aa14.55□□□□□ -0.08
TRA2A-209ENST00000494255 SHCBP1Q8NEM2 672 aa14.55□□□□□ -0.08
TRA2A-209ENST00000494255 REPS2Q8NFH8 660 aa14.55□□□□□ -0.08
TRA2A-209ENST00000494255 NUP133Q8WUM0 1156 aa14.55□□□□□ -0.08
TRA2A-209ENST00000494255 TEX13BQ9BXU2 312 aa14.55□□□□□ -0.08
TRA2A-209ENST00000494255 PORCNQ9H237 461 aa14.55□□□□□ -0.08
TRA2A-209ENST00000494255 SRRDQ9UH36 339 aa14.55□□□□□ -0.08
TRA2A-209ENST00000494255 SLC12A7Q9Y666 1083 aa14.55□□□□□ -0.08
TRA2A-209ENST00000494255 CYP46A1Q9Y6A2 500 aa14.55□□□□□ -0.08
TRA2A-209ENST00000494255 CALM1P0DP23 149 aa14.55□□□□□ -0.08
TRA2A-209ENST00000494255 CALM2P0DP24 149 aa14.55□□□□□ -0.08
TRA2A-209ENST00000494255 CALM3P0DP25 149 aa14.55□□□□□ -0.08
TRA2A-209ENST00000494255 CPA1P15085 419 aa14.55□□□□□ -0.08
TRA2A-209ENST00000494255 KIF5BP33176 963 aa14.55□□□□□ -0.08
TRA2A-209ENST00000494255 OAZ1P54368 228 aa14.55□□□□□ -0.08
TRA2A-209ENST00000494255 SNRNP48Q6IEG0 339 aaKnown RBP14.55□□□□□ -0.08
TRA2A-209ENST00000494255 FBXO46Q6PJ61 603 aaPredicted RBP14.55□□□□□ -0.08
TRA2A-209ENST00000494255 PLEKHH3Q7Z736 793 aa14.55□□□□□ -0.08
TRA2A-209ENST00000494255 SGMS1Q86VZ5 419 aa14.55□□□□□ -0.08
TRA2A-209ENST00000494255 RIOX2Q8IUF8 465 aa14.55□□□□□ -0.08
TRA2A-209ENST00000494255 CTCFLQ8NI51 663 aaPredicted RBP14.55□□□□□ -0.08
TRA2A-209ENST00000494255 TM6SF1Q9BZW5 370 aa14.55□□□□□ -0.08
TRA2A-209ENST00000494255 MCOLN1Q9GZU1 580 aa14.55□□□□□ -0.08
TRA2A-209ENST00000494255 MROH8Q9H579 483 aa14.55□□□□□ -0.08
TRA2A-209ENST00000494255 RAVER2Q9HCJ3 691 aaKnown RBP14.55□□□□□ -0.08
TRA2A-209ENST00000494255 ZNF214Q9UL59 606 aaPredicted RBP14.55□□□□□ -0.08
TRA2A-209ENST00000494255 KLRF2D3W0D1 207 aa14.54□□□□□ -0.08
TRA2A-209ENST00000494255 ATP2A1O14983 1001 aa14.54□□□□□ -0.08
TRA2A-209ENST00000494255 DHX16O60231 1041 aaKnown RBP14.54□□□□□ -0.08
TRA2A-209ENST00000494255 ERCC3P19447 782 aa14.54□□□□□ -0.08
TRA2A-209ENST00000494255 SLC4A3P48751 1232 aa14.54□□□□□ -0.08
TRA2A-209ENST00000494255 TROAPQ12815 778 aa14.54□□□□□ -0.08
TRA2A-209ENST00000494255 CCDC174Q6PII3 467 aa14.54□□□□□ -0.08
TRA2A-209ENST00000494255 RUFY3Q7L099 469 aa14.54□□□□□ -0.08
TRA2A-209ENST00000494255 GPR142Q7Z601 462 aa14.54□□□□□ -0.08
TRA2A-209ENST00000494255 MAP3K14Q99558 947 aa14.54□□□□□ -0.08
TRA2A-209ENST00000494255 UBA5Q9GZZ9 404 aa14.54□□□□□ -0.08
TRA2A-209ENST00000494255 ZSWIM6Q9HCJ5 1215 aa14.54□□□□□ -0.08
TRA2A-209ENST00000494255 PTPN22Q9Y2R2 807 aa14.54□□□□□ -0.08
TRA2A-209ENST00000494255 PRKCZQ05513 592 aa14.53□□□□□ -0.08
TRA2A-209ENST00000494255 STAG2Q8N3U4 1231 aa14.53□□□□□ -0.08
TRA2A-209ENST00000494255 RAET1EQ8TD07 263 aa14.53□□□□□ -0.08
TRA2A-209ENST00000494255 SOCS4Q8WXH5 440 aa14.53□□□□□ -0.08
TRA2A-209ENST00000494255 NUDT12Q9BQG2 462 aa14.53□□□□□ -0.08
TRA2A-209ENST00000494255 MYL10Q9BUA6 226 aa14.53□□□□□ -0.08
TRA2A-209ENST00000494255 RANBP17Q9H2T7 1088 aaKnown RBP14.53□□□□□ -0.08
TRA2A-209ENST00000494255 UPF2Q9HAU5 1272 aaKnown RBP14.53□□□□□ -0.08
TRA2A-209ENST00000494255 MAD2L2Q9UI95 211 aa14.53□□□□□ -0.08
TRA2A-209ENST00000494255 PNMA2Q9UL42 364 aa14.53□□□□□ -0.08
TRA2A-209ENST00000494255 PALM3A6NDB9 673 aaPredicted RBP14.52□□□□□ -0.08
TRA2A-209ENST00000494255 STRNO43815 780 aa14.52□□□□□ -0.08
TRA2A-209ENST00000494255 SNAP25P60880 206 aa14.52□□□□□ -0.08
TRA2A-209ENST00000494255 Q6ZUG5 572 aa14.52□□□□□ -0.08
TRA2A-209ENST00000494255 TNS4Q8IZW8 715 aa14.52□□□□□ -0.08
TRA2A-209ENST00000494255 CPVLQ9H3G5 476 aa14.52□□□□□ -0.08
TRA2A-209ENST00000494255 NAP1L2Q9ULW6 460 aaPredicted RBP14.52□□□□□ -0.08
TRA2A-209ENST00000494255 GABRQQ9UN88 632 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms