RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 SGPL1O95470 568 aa17.34■□□□□ 0.37
ATG4B-224ENST00000494132 CCND3P30281 292 aaPredicted RBP17.34■□□□□ 0.37
ATG4B-224ENST00000494132 SNAP25P60880 206 aa17.34■□□□□ 0.37
ATG4B-224ENST00000494132 CACNB2Q08289 660 aaPredicted RBP17.34■□□□□ 0.37
ATG4B-224ENST00000494132 IMMTQ16891 758 aaKnown RBP17.34■□□□□ 0.37
ATG4B-224ENST00000494132 CCDC96Q2M329 555 aa17.34■□□□□ 0.37
ATG4B-224ENST00000494132 SNRNP48Q6IEG0 339 aaKnown RBP17.34■□□□□ 0.37
ATG4B-224ENST00000494132 DPP9Q86TI2 863 aa17.34■□□□□ 0.37
ATG4B-224ENST00000494132 RUFY2Q8WXA3 655 aa17.34■□□□□ 0.37
ATG4B-224ENST00000494132 CCDC136Q96JN2 1154 aa17.34■□□□□ 0.37
ATG4B-224ENST00000494132 MROH8Q9H579 483 aa17.34■□□□□ 0.37
ATG4B-224ENST00000494132 HMX1Q9NP08 348 aaPredicted RBP17.34■□□□□ 0.37
ATG4B-224ENST00000494132 PAK6Q9NQU5 681 aaPredicted RBP17.34■□□□□ 0.37
ATG4B-224ENST00000494132 FEM1BQ9UK73 627 aa17.34■□□□□ 0.37
ATG4B-224ENST00000494132 SYNPO2Q9UMS6 1093 aa17.34■□□□□ 0.37
ATG4B-224ENST00000494132 RIPK3Q9Y572 518 aa17.34■□□□□ 0.37
ATG4B-224ENST00000494132 CTDP1Q9Y5B0 961 aaPredicted RBP17.34■□□□□ 0.37
ATG4B-224ENST00000494132 FRMPD2Q68DX3 1309 aaPredicted RBP17.33■□□□□ 0.36
ATG4B-224ENST00000494132 RPTORQ8N122 1335 aa17.33■□□□□ 0.36
ATG4B-224ENST00000494132 SGSM2O43147 1006 aa17.33■□□□□ 0.36
ATG4B-224ENST00000494132 PGK2P07205 417 aa17.33■□□□□ 0.36
ATG4B-224ENST00000494132 CYP2C19P33261 490 aa17.33■□□□□ 0.36
ATG4B-224ENST00000494132 NOVP48745 357 aa17.33■□□□□ 0.36
ATG4B-224ENST00000494132 STAT2P52630 851 aa17.33■□□□□ 0.36
ATG4B-224ENST00000494132 PPP4R3BQ5MIZ7 849 aa17.33■□□□□ 0.36
ATG4B-224ENST00000494132 RCSD1Q6JBY9 416 aa17.33■□□□□ 0.36
ATG4B-224ENST00000494132 ESR2Q92731 530 aa17.33■□□□□ 0.36
ATG4B-224ENST00000494132 GMCL1Q96IK5 515 aa17.33■□□□□ 0.36
ATG4B-224ENST00000494132 TCP11L1Q9NUJ3 509 aa17.33■□□□□ 0.36
ATG4B-224ENST00000494132 ZBED4O75132 1171 aa17.32■□□□□ 0.36
ATG4B-224ENST00000494132 SLC25A27O95847 323 aa17.32■□□□□ 0.36
ATG4B-224ENST00000494132 TFRCP02786 760 aaKnown RBP17.32■□□□□ 0.36
ATG4B-224ENST00000494132 TOP1P11387 765 aaKnown RBP17.32■□□□□ 0.36
ATG4B-224ENST00000494132 PCP11498 1178 aaKnown RBP17.32■□□□□ 0.36
ATG4B-224ENST00000494132 FCER1AP12319 257 aa17.32■□□□□ 0.36
ATG4B-224ENST00000494132 TAL1P17542 331 aaPredicted RBP17.32■□□□□ 0.36
ATG4B-224ENST00000494132 MAP3K21Q5TCX8 1036 aa17.32■□□□□ 0.36
ATG4B-224ENST00000494132 TTBK2Q6IQ55 1244 aa17.32■□□□□ 0.36
ATG4B-224ENST00000494132 MMP19Q99542 508 aa17.32■□□□□ 0.36
ATG4B-224ENST00000494132 TEX13BQ9BXU2 312 aa17.32■□□□□ 0.36
ATG4B-224ENST00000494132 SLC38A10Q9HBR0 1119 aa17.32■□□□□ 0.36
ATG4B-224ENST00000494132 CTNNA3Q9UI47 895 aa17.32■□□□□ 0.36
ATG4B-224ENST00000494132 TAF6LQ9Y6J9 622 aa17.32■□□□□ 0.36
ATG4B-224ENST00000494132 STRNO43815 780 aa17.31■□□□□ 0.36
ATG4B-224ENST00000494132 NEFLP07196 543 aa17.31■□□□□ 0.36
ATG4B-224ENST00000494132 HOXC6P09630 235 aa17.31■□□□□ 0.36
ATG4B-224ENST00000494132 SLC16A2P36021 539 aa17.31■□□□□ 0.36
ATG4B-224ENST00000494132 CCDC174Q6PII3 467 aa17.31■□□□□ 0.36
ATG4B-224ENST00000494132 TRMT44Q8IYL2 757 aaKnown RBP17.31■□□□□ 0.36
ATG4B-224ENST00000494132 GPCPD1Q9NPB8 672 aa17.31■□□□□ 0.36
ATG4B-224ENST00000494132 HOMER2Q9NSB8 354 aa17.31■□□□□ 0.36
ATG4B-224ENST00000494132 LCTP09848 1927 aa17.31■□□□□ 0.36
ATG4B-224ENST00000494132 FARP2O94887 1054 aaPredicted RBP17.3■□□□□ 0.36
ATG4B-224ENST00000494132 CYP21A2P08686 494 aa17.3■□□□□ 0.36
ATG4B-224ENST00000494132 KCTD2Q14681 263 aa17.3■□□□□ 0.36
ATG4B-224ENST00000494132 MFSD14CQ5VZR4 134 aa17.3■□□□□ 0.36
ATG4B-224ENST00000494132 ZSWIM5Q9P217 1185 aa17.3■□□□□ 0.36
ATG4B-224ENST00000494132 PRR12Q9ULL5 1215 aa17.3■□□□□ 0.36
ATG4B-224ENST00000494132 PDHBP11177 359 aa17.29■□□□□ 0.36
ATG4B-224ENST00000494132 CNGA1P29973 690 aa17.29■□□□□ 0.36
ATG4B-224ENST00000494132 PRAMEF19Q5SWL8 479 aa17.29■□□□□ 0.36
ATG4B-224ENST00000494132 FAM160B2Q86V87 743 aa17.29■□□□□ 0.36
ATG4B-224ENST00000494132 TRPV1Q8NER1 839 aa17.29■□□□□ 0.36
ATG4B-224ENST00000494132 DIS3LQ8TF46 1054 aaKnown RBP17.29■□□□□ 0.36
ATG4B-224ENST00000494132 CHURC1Q8WUH1 139 aa17.29■□□□□ 0.36
ATG4B-224ENST00000494132 DCAF4Q8WV16 495 aa17.29■□□□□ 0.36
ATG4B-224ENST00000494132 MAML3Q96JK9 1138 aa17.29■□□□□ 0.36
ATG4B-224ENST00000494132 AGBL1Q96MI9 1066 aa17.29■□□□□ 0.36
ATG4B-224ENST00000494132 CRISPLD2Q9H0B8 497 aa17.29■□□□□ 0.36
ATG4B-224ENST00000494132 ZNF536O15090 1300 aa17.28■□□□□ 0.36
ATG4B-224ENST00000494132 TNKSO95271 1327 aa17.28■□□□□ 0.36
ATG4B-224ENST00000494132 BAZ2BQ9UIF8 2168 aaKnown RBP17.28■□□□□ 0.36
ATG4B-224ENST00000494132 GOLGA8HP0CJ92 632 aa17.28■□□□□ 0.36
ATG4B-224ENST00000494132 CYB5R4Q7L1T6 521 aa17.28■□□□□ 0.36
ATG4B-224ENST00000494132 IQCA1Q86XH1 822 aa17.28■□□□□ 0.36
ATG4B-224ENST00000494132 ABRAQ8N0Z2 381 aa17.28■□□□□ 0.36
ATG4B-224ENST00000494132 TTC14Q96N46 770 aa17.28■□□□□ 0.36
ATG4B-224ENST00000494132 ZSCAN10Q96SZ4 725 aaPredicted RBP17.28■□□□□ 0.36
ATG4B-224ENST00000494132 KRT23Q9C075 422 aa17.28■□□□□ 0.36
ATG4B-224ENST00000494132 CPVLQ9H3G5 476 aa17.28■□□□□ 0.36
ATG4B-224ENST00000494132 RBM8AQ9Y5S9 174 aaKnown RBP17.28■□□□□ 0.36
ATG4B-224ENST00000494132 U3KPZ7 1027 aaPredicted RBP17.28■□□□□ 0.36
ATG4B-224ENST00000494132 ATP2A1O14983 1001 aa17.27■□□□□ 0.36
ATG4B-224ENST00000494132 COPB2P35606 906 aa17.27■□□□□ 0.36
ATG4B-224ENST00000494132 BMP2KLQ5H9B9 411 aa17.27■□□□□ 0.36
ATG4B-224ENST00000494132 ANO1Q5XXA6 986 aa17.27■□□□□ 0.36
ATG4B-224ENST00000494132 OLFML2BQ68BL8 750 aa17.27■□□□□ 0.36
ATG4B-224ENST00000494132 STOX1Q6ZVD7 989 aa17.27■□□□□ 0.36
ATG4B-224ENST00000494132 ENAHQ8N8S7 591 aaPredicted RBP17.27■□□□□ 0.36
ATG4B-224ENST00000494132 PAWRQ96IZ0 340 aaKnown RBP17.27■□□□□ 0.36
ATG4B-224ENST00000494132 ESYT1Q9BSJ8 1104 aa17.27■□□□□ 0.36
ATG4B-224ENST00000494132 SLC5A4Q9NY91 659 aa17.27■□□□□ 0.36
ATG4B-224ENST00000494132 PLA2G6O60733 806 aa17.26■□□□□ 0.35
ATG4B-224ENST00000494132 ALAS1P13196 640 aa17.26■□□□□ 0.35
ATG4B-224ENST00000494132 ZNF792Q3KQV3 632 aa17.26■□□□□ 0.35
ATG4B-224ENST00000494132 SYDE2Q5VT97 1194 aa17.26■□□□□ 0.35
ATG4B-224ENST00000494132 CHST3Q7LGC8 479 aa17.26■□□□□ 0.35
ATG4B-224ENST00000494132 UBE2Q1Q7Z7E8 422 aa17.26■□□□□ 0.35
ATG4B-224ENST00000494132 DGKHQ86XP1 1220 aa17.26■□□□□ 0.35
ATG4B-224ENST00000494132 PNMA1Q8ND90 353 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms