RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 CCDC82Q8N4S0 544 aa10.9□□□□□ -0.66
CSTF1-206ENST00000493039 DCAF4Q8WV16 495 aa10.9□□□□□ -0.66
CSTF1-206ENST00000493039 BRI3BPQ8WY22 251 aa10.9□□□□□ -0.66
CSTF1-206ENST00000493039 RASSF10A6NK89 507 aa10.9□□□□□ -0.66
CSTF1-206ENST00000493039 PARP1P09874 1014 aaKnown RBP10.9□□□□□ -0.66
CSTF1-206ENST00000493039 CYP4F22Q6NT55 531 aa10.9□□□□□ -0.66
CSTF1-206ENST00000493039 BTNL9Q6UXG8 535 aa10.9□□□□□ -0.66
CSTF1-206ENST00000493039 TMEM232C9JQI7 657 aa10.89□□□□□ -0.67
CSTF1-206ENST00000493039 WDR46O15213 610 aaKnown RBP10.89□□□□□ -0.67
CSTF1-206ENST00000493039 MAFGO15525 162 aa10.89□□□□□ -0.67
CSTF1-206ENST00000493039 JAK2O60674 1132 aa10.89□□□□□ -0.67
CSTF1-206ENST00000493039 FDPSP14324 419 aaKnown RBP10.89□□□□□ -0.67
CSTF1-206ENST00000493039 SNAPC2Q13487 334 aa10.89□□□□□ -0.67
CSTF1-206ENST00000493039 PPP2R5BQ15173 497 aa10.89□□□□□ -0.67
CSTF1-206ENST00000493039 ASPRV1Q53RT3 343 aa10.89□□□□□ -0.67
CSTF1-206ENST00000493039 HSCBQ8IWL3 235 aa10.89□□□□□ -0.67
CSTF1-206ENST00000493039 RGS22Q8NE09 1264 aa10.89□□□□□ -0.67
CSTF1-206ENST00000493039 NSUN7Q8NE18 718 aaKnown RBP10.89□□□□□ -0.67
CSTF1-206ENST00000493039 CTCFLQ8NI51 663 aaPredicted RBP10.89□□□□□ -0.67
CSTF1-206ENST00000493039 PHKBQ93100 1093 aa10.89□□□□□ -0.67
CSTF1-206ENST00000493039 RPAP3Q9H6T3 665 aaPredicted RBP10.89□□□□□ -0.67
CSTF1-206ENST00000493039 PTPRFP10586 1907 aa10.89□□□□□ -0.67
CSTF1-206ENST00000493039 TESPA1A2RU30 521 aaPredicted RBP10.89□□□□□ -0.67
CSTF1-206ENST00000493039 IFNAR1P17181 557 aa10.89□□□□□ -0.67
CSTF1-206ENST00000493039 CCDC96Q2M329 555 aa10.89□□□□□ -0.67
CSTF1-206ENST00000493039 GPATCH4Q5T3I0 446 aaKnown RBP10.89□□□□□ -0.67
CSTF1-206ENST00000493039 CATSPERGQ6ZRH7 1159 aa10.89□□□□□ -0.67
CSTF1-206ENST00000493039 FAM177A1Q8N128 213 aaPredicted RBP10.89□□□□□ -0.67
CSTF1-206ENST00000493039 PROCA1Q8NCQ7 364 aaPredicted RBP10.89□□□□□ -0.67
CSTF1-206ENST00000493039 SMARCC2Q8TAQ2 1214 aa10.89□□□□□ -0.67
CSTF1-206ENST00000493039 RIOX1Q9H6W3 641 aa10.89□□□□□ -0.67
CSTF1-206ENST00000493039 BAZ2BQ9UIF8 2168 aaKnown RBP10.89□□□□□ -0.67
CSTF1-206ENST00000493039 hCG_1642624A0A1W2PR95 340 aa10.88□□□□□ -0.67
CSTF1-206ENST00000493039 BTBD19C9JJ37 291 aa10.88□□□□□ -0.67
CSTF1-206ENST00000493039 CLGNO14967 610 aa10.88□□□□□ -0.67
CSTF1-206ENST00000493039 PLA2G6O60733 806 aa10.88□□□□□ -0.67
CSTF1-206ENST00000493039 HOXA7P31268 230 aaPredicted RBP10.88□□□□□ -0.67
CSTF1-206ENST00000493039 KIF5BP33176 963 aa10.88□□□□□ -0.67
CSTF1-206ENST00000493039 GTF2A2P52657 109 aa10.88□□□□□ -0.67
CSTF1-206ENST00000493039 DEFB115Q30KQ5 88 aa10.88□□□□□ -0.67
CSTF1-206ENST00000493039 MTMR8Q96EF0 704 aa10.88□□□□□ -0.67
CSTF1-206ENST00000493039 JMJD4Q9H9V9 463 aa10.88□□□□□ -0.67
CSTF1-206ENST00000493039 RBM28Q9NW13 759 aaKnown RBP10.88□□□□□ -0.67
CSTF1-206ENST00000493039 CNTNAP5Q8WYK1 1306 aa10.88□□□□□ -0.67
CSTF1-206ENST00000493039 CCL15-CCL14A0A0B4J2E2 113 aa10.88□□□□□ -0.67
CSTF1-206ENST00000493039 ANP32AP39687 249 aaKnown RBP10.88□□□□□ -0.67
CSTF1-206ENST00000493039 SNAP25P60880 206 aa10.88□□□□□ -0.67
CSTF1-206ENST00000493039 PKN1Q16512 942 aa10.88□□□□□ -0.67
CSTF1-206ENST00000493039 CCL15Q16663 113 aa10.88□□□□□ -0.67
CSTF1-206ENST00000493039 GADL1Q6ZQY3 521 aa10.88□□□□□ -0.67
CSTF1-206ENST00000493039 ADGRF4Q8IZF3 695 aa10.88□□□□□ -0.67
CSTF1-206ENST00000493039 FAM43AQ8N2R8 423 aa10.88□□□□□ -0.67
CSTF1-206ENST00000493039 CCDC102AQ96A19 550 aa10.88□□□□□ -0.67
CSTF1-206ENST00000493039 SHISA4Q96DD7 197 aa10.88□□□□□ -0.67
CSTF1-206ENST00000493039 SPZ1Q9BXG8 430 aa10.88□□□□□ -0.67
CSTF1-206ENST00000493039 FOXD4L1Q9NU39 408 aa10.88□□□□□ -0.67
CSTF1-206ENST00000493039 TMOD4Q9NZQ9 345 aa10.88□□□□□ -0.67
CSTF1-206ENST00000493039 PRR12Q9ULL5 1215 aa10.88□□□□□ -0.67
CSTF1-206ENST00000493039 AGTPBP1Q9UPW5 1226 aa10.88□□□□□ -0.67
CSTF1-206ENST00000493039 V9GY48 417 aaPredicted RBP10.88□□□□□ -0.67
CSTF1-206ENST00000493039 CCDC196A0A1B0GTZ2 297 aa10.87□□□□□ -0.67
CSTF1-206ENST00000493039 IGF2BP3O00425 579 aaKnown RBP eCLIP10.87□□□□□ -0.67
CSTF1-206ENST00000493039 PEX10O60683 326 aa10.87□□□□□ -0.67
CSTF1-206ENST00000493039 CETPP11597 493 aa10.87□□□□□ -0.67
CSTF1-206ENST00000493039 SMARCA1P28370 1054 aa10.87□□□□□ -0.67
CSTF1-206ENST00000493039 FASTKD5Q7L8L6 764 aaKnown RBP10.87□□□□□ -0.67
CSTF1-206ENST00000493039 SPRYD3Q8NCJ5 442 aa10.87□□□□□ -0.67
CSTF1-206ENST00000493039 VAT1LQ9HCJ6 419 aa10.87□□□□□ -0.67
CSTF1-206ENST00000493039 FEM1BQ9UK73 627 aa10.87□□□□□ -0.67
CSTF1-206ENST00000493039 ADAMTS5Q9UNA0 930 aa10.87□□□□□ -0.67
CSTF1-206ENST00000493039 PTPDC1A2A3K4 754 aa10.86□□□□□ -0.67
CSTF1-206ENST00000493039 USP17L15C9J2P7 530 aa10.86□□□□□ -0.67
CSTF1-206ENST00000493039 USP17L13C9JLJ4 530 aa10.86□□□□□ -0.67
CSTF1-206ENST00000493039 USP17L11C9JVI0 530 aa10.86□□□□□ -0.67
CSTF1-206ENST00000493039 USP17L18D6R9N7 530 aa10.86□□□□□ -0.67
CSTF1-206ENST00000493039 USP17L22D6RA61 530 aa10.86□□□□□ -0.67
CSTF1-206ENST00000493039 USP17L17D6RBQ6 530 aa10.86□□□□□ -0.67
CSTF1-206ENST00000493039 USP17L19D6RCP7 530 aa10.86□□□□□ -0.67
CSTF1-206ENST00000493039 USP17L20D6RJB6 530 aa10.86□□□□□ -0.67
CSTF1-206ENST00000493039 PPP1R11O60927 126 aaPredicted RBP10.86□□□□□ -0.67
CSTF1-206ENST00000493039 AOC2O75106 756 aa10.86□□□□□ -0.67
CSTF1-206ENST00000493039 STAT2P52630 851 aa10.86□□□□□ -0.67
CSTF1-206ENST00000493039 C1QTNF8P60827 252 aa10.86□□□□□ -0.67
CSTF1-206ENST00000493039 USP17L24Q0WX57 530 aa10.86□□□□□ -0.67
CSTF1-206ENST00000493039 GPATCH11Q8N954 259 aa10.86□□□□□ -0.67
CSTF1-206ENST00000493039 PIBF1Q8WXW3 757 aa10.86□□□□□ -0.67
CSTF1-206ENST00000493039 DDX11Q96FC9 970 aa10.86□□□□□ -0.67
CSTF1-206ENST00000493039 INTS4Q96HW7 963 aaKnown RBP10.86□□□□□ -0.67
CSTF1-206ENST00000493039 CAPNS2Q96L46 248 aa10.86□□□□□ -0.67
CSTF1-206ENST00000493039 AIFM3Q96NN9 605 aa10.86□□□□□ -0.67
CSTF1-206ENST00000493039 PIGSQ96S52 555 aa10.86□□□□□ -0.67
CSTF1-206ENST00000493039 P2RX7Q99572 595 aaKnown RBP10.86□□□□□ -0.67
CSTF1-206ENST00000493039 TANGO6Q9C0B7 1094 aa10.86□□□□□ -0.67
CSTF1-206ENST00000493039 RLFQ13129 1914 aa10.86□□□□□ -0.67
CSTF1-206ENST00000493039 CPLX1O14810 134 aa10.86□□□□□ -0.67
CSTF1-206ENST00000493039 DHX16O60231 1041 aaKnown RBP10.86□□□□□ -0.67
CSTF1-206ENST00000493039 FLOT1O75955 427 aa10.86□□□□□ -0.67
CSTF1-206ENST00000493039 FMNL1O95466 1100 aaPredicted RBP10.86□□□□□ -0.67
CSTF1-206ENST00000493039 DSG3P32926 999 aa10.86□□□□□ -0.67
CSTF1-206ENST00000493039 GNAQP50148 359 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms