RNA–Protein interactions for RNA: ENST00000492142.5

TRO-223, Transcript of trophinin, human

TSL 3

Gene TRO, Length 485 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRO-223	ENST00000492142	PRRT2	Q7Z6L0	340 aa	Predicted RBP	11.32	□□□□□ -0.6
TRO-223	ENST00000492142	RASAL3	Q86YV0	1011 aa		11.32	□□□□□ -0.6
TRO-223	ENST00000492142	NSUN7	Q8NE18	718 aa	Known RBP	11.32	□□□□□ -0.6
TRO-223	ENST00000492142	C12orf42	Q96LP6	360 aa		11.32	□□□□□ -0.6
TRO-223	ENST00000492142	LLPH	Q9BRT6	129 aa	Known RBP	11.32	□□□□□ -0.6
TRO-223	ENST00000492142	SLC26A6	Q9BXS9	759 aa		11.32	□□□□□ -0.6
TRO-223	ENST00000492142	TANGO6	Q9C0B7	1094 aa		11.32	□□□□□ -0.6
TRO-223	ENST00000492142	SMC3	Q9UQE7	1217 aa		11.32	□□□□□ -0.6
TRO-223	ENST00000492142	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	11.32	□□□□□ -0.6
TRO-223	ENST00000492142		V9GY48	417 aa	Predicted RBP	11.32	□□□□□ -0.6
TRO-223	ENST00000492142	NID2	Q14112	1375 aa		11.31	□□□□□ -0.6
TRO-223	ENST00000492142	CCL15-CCL14	A0A0B4J2E2	113 aa		11.31	□□□□□ -0.6
TRO-223	ENST00000492142	PTPDC1	A2A3K4	754 aa		11.31	□□□□□ -0.6
TRO-223	ENST00000492142	WDR46	O15213	610 aa	Known RBP	11.31	□□□□□ -0.6
TRO-223	ENST00000492142	CDKL5	O76039	1030 aa		11.31	□□□□□ -0.6
TRO-223	ENST00000492142	IFNAR1	P17181	557 aa		11.31	□□□□□ -0.6
TRO-223	ENST00000492142	GTF2A2	P52657	109 aa		11.31	□□□□□ -0.6
TRO-223	ENST00000492142	SNAP25	P60880	206 aa		11.31	□□□□□ -0.6
TRO-223	ENST00000492142	FUT2	Q10981	343 aa		11.31	□□□□□ -0.6
TRO-223	ENST00000492142	CCL15	Q16663	113 aa		11.31	□□□□□ -0.6
TRO-223	ENST00000492142	TREML2	Q5T2D2	321 aa		11.31	□□□□□ -0.6
TRO-223	ENST00000492142	FASTKD5	Q7L8L6	764 aa	Known RBP	11.31	□□□□□ -0.6
TRO-223	ENST00000492142	ADGRF4	Q8IZF3	695 aa		11.31	□□□□□ -0.6
TRO-223	ENST00000492142	CHURC1	Q8WUH1	139 aa		11.31	□□□□□ -0.6
TRO-223	ENST00000492142	KIFC2	Q96AC6	838 aa		11.31	□□□□□ -0.6
TRO-223	ENST00000492142	FBXO28	Q9NVF7	368 aa		11.31	□□□□□ -0.6
TRO-223	ENST00000492142	FEM1B	Q9UK73	627 aa		11.31	□□□□□ -0.6
TRO-223	ENST00000492142	USP17L15	C9J2P7	530 aa		11.3	□□□□□ -0.6
TRO-223	ENST00000492142	USP17L13	C9JLJ4	530 aa		11.3	□□□□□ -0.6
TRO-223	ENST00000492142	USP17L11	C9JVI0	530 aa		11.3	□□□□□ -0.6
TRO-223	ENST00000492142	USP17L18	D6R9N7	530 aa		11.3	□□□□□ -0.6
TRO-223	ENST00000492142	USP17L22	D6RA61	530 aa		11.3	□□□□□ -0.6
TRO-223	ENST00000492142	USP17L17	D6RBQ6	530 aa		11.3	□□□□□ -0.6
TRO-223	ENST00000492142	USP17L19	D6RCP7	530 aa		11.3	□□□□□ -0.6
TRO-223	ENST00000492142	USP17L20	D6RJB6	530 aa		11.3	□□□□□ -0.6
TRO-223	ENST00000492142	CYTH3	O43739	400 aa		11.3	□□□□□ -0.6
TRO-223	ENST00000492142	FLOT1	O75955	427 aa		11.3	□□□□□ -0.6
TRO-223	ENST00000492142	FMNL1	O95466	1100 aa	Predicted RBP	11.3	□□□□□ -0.6
TRO-223	ENST00000492142	SLC10A3	P09131	477 aa		11.3	□□□□□ -0.6
TRO-223	ENST00000492142	ZBTB48	P10074	688 aa	Predicted RBP	11.3	□□□□□ -0.6
TRO-223	ENST00000492142	CETP	P11597	493 aa		11.3	□□□□□ -0.6
TRO-223	ENST00000492142	GJB2	P29033	226 aa		11.3	□□□□□ -0.6
TRO-223	ENST00000492142	STAT2	P52630	851 aa		11.3	□□□□□ -0.6
TRO-223	ENST00000492142	AKAP17A	Q02040	695 aa	Known RBP	11.3	□□□□□ -0.6
TRO-223	ENST00000492142	USP17L24	Q0WX57	530 aa		11.3	□□□□□ -0.6
TRO-223	ENST00000492142	MOGS	Q13724	837 aa		11.3	□□□□□ -0.6
TRO-223	ENST00000492142	SYDE2	Q5VT97	1194 aa		11.3	□□□□□ -0.6
TRO-223	ENST00000492142	CATSPERG	Q6ZRH7	1159 aa		11.3	□□□□□ -0.6
TRO-223	ENST00000492142	TRIM22	Q8IYM9	498 aa		11.3	□□□□□ -0.6
TRO-223	ENST00000492142	CCDC102A	Q96A19	550 aa		11.3	□□□□□ -0.6
TRO-223	ENST00000492142	INTS4	Q96HW7	963 aa	Known RBP	11.3	□□□□□ -0.6
TRO-223	ENST00000492142	MS4A4A	Q96JQ5	239 aa		11.3	□□□□□ -0.6
TRO-223	ENST00000492142	JMJD4	Q9H9V9	463 aa		11.3	□□□□□ -0.6
TRO-223	ENST00000492142	ORC3	Q9UBD5	711 aa	Predicted RBP	11.3	□□□□□ -0.6
TRO-223	ENST00000492142	PRR12	Q9ULL5	1215 aa		11.3	□□□□□ -0.6
TRO-223	ENST00000492142	CNTNAP5	Q8WYK1	1306 aa		11.3	□□□□□ -0.6
TRO-223	ENST00000492142	PTPRF	P10586	1907 aa		11.29	□□□□□ -0.6
TRO-223	ENST00000492142	PRPF3	O43395	683 aa	Known RBP	11.29	□□□□□ -0.6
TRO-223	ENST00000492142	FDPS	P14324	419 aa	Known RBP	11.29	□□□□□ -0.6
TRO-223	ENST00000492142	SMARCA1	P28370	1054 aa		11.29	□□□□□ -0.6
TRO-223	ENST00000492142	FOSB	P53539	338 aa		11.29	□□□□□ -0.6
TRO-223	ENST00000492142	HTRA3	P83110	453 aa		11.29	□□□□□ -0.6
TRO-223	ENST00000492142	DEFB115	Q30KQ5	88 aa		11.29	□□□□□ -0.6
TRO-223	ENST00000492142	CYP4F22	Q6NT55	531 aa		11.29	□□□□□ -0.6
TRO-223	ENST00000492142	GPAT2	Q6NUI2	795 aa		11.29	□□□□□ -0.6
TRO-223	ENST00000492142	BTNL9	Q6UXG8	535 aa		11.29	□□□□□ -0.6
TRO-223	ENST00000492142	FAM160B2	Q86V87	743 aa		11.29	□□□□□ -0.6
TRO-223	ENST00000492142	HOMER1	Q86YM7	354 aa		11.29	□□□□□ -0.6
TRO-223	ENST00000492142	FAM184A	Q8NB25	1140 aa		11.29	□□□□□ -0.6
TRO-223	ENST00000492142	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.29	□□□□□ -0.6
TRO-223	ENST00000492142	SMARCC2	Q8TAQ2	1214 aa		11.29	□□□□□ -0.6
TRO-223	ENST00000492142	BRI3BP	Q8WY22	251 aa		11.29	□□□□□ -0.6
TRO-223	ENST00000492142	RRP36	Q96EU6	259 aa	Known RBP	11.29	□□□□□ -0.6
TRO-223	ENST00000492142	HHIPL1	Q96JK4	782 aa		11.29	□□□□□ -0.6
TRO-223	ENST00000492142	PIGS	Q96S52	555 aa		11.29	□□□□□ -0.6
TRO-223	ENST00000492142	SLF1	Q9BQI6	1058 aa		11.29	□□□□□ -0.6
TRO-223	ENST00000492142	SPZ1	Q9BXG8	430 aa		11.29	□□□□□ -0.6
TRO-223	ENST00000492142	RIOX1	Q9H6W3	641 aa		11.29	□□□□□ -0.6
TRO-223	ENST00000492142	FAM155A	B1AL88	458 aa	Predicted RBP	11.28	□□□□□ -0.6
TRO-223	ENST00000492142	PLA2G6	O60733	806 aa		11.28	□□□□□ -0.6
TRO-223	ENST00000492142	HMGN5	P82970	282 aa	Known RBP	11.28	□□□□□ -0.6
TRO-223	ENST00000492142	COG2	Q14746	738 aa		11.28	□□□□□ -0.6
TRO-223	ENST00000492142	PRPF38A	Q8NAV1	312 aa	Known RBP	11.28	□□□□□ -0.6
TRO-223	ENST00000492142	AIFM3	Q96NN9	605 aa		11.28	□□□□□ -0.6
TRO-223	ENST00000492142	P2RX7	Q99572	595 aa	Known RBP	11.28	□□□□□ -0.6
TRO-223	ENST00000492142	ALG1	Q9BT22	464 aa		11.28	□□□□□ -0.6
TRO-223	ENST00000492142	RNF26	Q9BY78	433 aa	Predicted RBP	11.28	□□□□□ -0.6
TRO-223	ENST00000492142	SEC63	Q9UGP8	760 aa	Known RBP	11.28	□□□□□ -0.6
TRO-223	ENST00000492142	AGTPBP1	Q9UPW5	1226 aa		11.28	□□□□□ -0.6
TRO-223	ENST00000492142	CTDP1	Q9Y5B0	961 aa	Predicted RBP	11.28	□□□□□ -0.6
TRO-223	ENST00000492142	PNMA6F	A0A0J9YX94	578 aa		11.27	□□□□□ -0.61
TRO-223	ENST00000492142	MANSC4	A6NHS7	340 aa	Predicted RBP	11.27	□□□□□ -0.61
TRO-223	ENST00000492142	RASSF10	A6NK89	507 aa		11.27	□□□□□ -0.61
TRO-223	ENST00000492142	BTBD19	C9JJ37	291 aa		11.27	□□□□□ -0.61
TRO-223	ENST00000492142	PDHX	O00330	501 aa		11.27	□□□□□ -0.61
TRO-223	ENST00000492142	ZBED4	O75132	1171 aa		11.27	□□□□□ -0.61
TRO-223	ENST00000492142	GABBR2	O75899	941 aa		11.27	□□□□□ -0.61
TRO-223	ENST00000492142	DEXI	O95424	95 aa		11.27	□□□□□ -0.61
TRO-223	ENST00000492142	OSBP	P22059	807 aa		11.27	□□□□□ -0.61
TRO-223	ENST00000492142	HOXA7	P31268	230 aa	Predicted RBP	11.27	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms