RNA–Protein interactions for RNA: ENST00000491802.1

CPNE9-204, Transcript of copine family member 9, humanhuman

TSL 4

Gene CPNE9, Length 584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-204ENST00000491802 ANKS1AQ92625 1134 aa27.29■■□□□ 1.96
CPNE9-204ENST00000491802 KAT14Q9H8E8 782 aa27.29■■□□□ 1.96
CPNE9-204ENST00000491802 FRMPD2Q68DX3 1309 aaPredicted RBP27.28■■□□□ 1.96
CPNE9-204ENST00000491802 PLA2G6O60733 806 aa27.28■■□□□ 1.96
CPNE9-204ENST00000491802 SOX10P56693 466 aa27.28■■□□□ 1.96
CPNE9-204ENST00000491802 RNF20Q5VTR2 975 aa27.28■■□□□ 1.96
CPNE9-204ENST00000491802 MB21D2Q8IYB1 491 aaPredicted RBP27.28■■□□□ 1.96
CPNE9-204ENST00000491802 PNMA1Q8ND90 353 aa27.28■■□□□ 1.96
CPNE9-204ENST00000491802 CHURC1Q8WUH1 139 aa27.28■■□□□ 1.96
CPNE9-204ENST00000491802 ZNF214Q9UL59 606 aaPredicted RBP27.28■■□□□ 1.96
CPNE9-204ENST00000491802 ERCC3P19447 782 aa27.27■■□□□ 1.96
CPNE9-204ENST00000491802 UBXN2AP68543 259 aa27.27■■□□□ 1.96
CPNE9-204ENST00000491802 IFIT1BQ5T764 474 aaKnown RBP27.27■■□□□ 1.96
CPNE9-204ENST00000491802 CTDP1Q9Y5B0 961 aaPredicted RBP27.27■■□□□ 1.96
CPNE9-204ENST00000491802 BRCA2P51587 3418 aa27.27■■□□□ 1.96
CPNE9-204ENST00000491802 SLC15A5A6NIM6 579 aa27.26■■□□□ 1.95
CPNE9-204ENST00000491802 STRNO43815 780 aa27.26■■□□□ 1.95
CPNE9-204ENST00000491802 ZBED4O75132 1171 aa27.26■■□□□ 1.95
CPNE9-204ENST00000491802 SLC25A27O95847 323 aa27.26■■□□□ 1.95
CPNE9-204ENST00000491802 FDX1P10109 184 aa27.26■■□□□ 1.95
CPNE9-204ENST00000491802 PTPREP23469 700 aa27.26■■□□□ 1.95
CPNE9-204ENST00000491802 GRB14Q14449 540 aa27.26■■□□□ 1.95
CPNE9-204ENST00000491802 SEC23AQ15436 765 aa27.26■■□□□ 1.95
CPNE9-204ENST00000491802 CHST3Q7LGC8 479 aa27.26■■□□□ 1.95
CPNE9-204ENST00000491802 NCAPG2Q86XI2 1143 aa27.26■■□□□ 1.95
CPNE9-204ENST00000491802 TRMT44Q8IYL2 757 aaKnown RBP27.26■■□□□ 1.95
CPNE9-204ENST00000491802 MROH8Q9H579 483 aa27.26■■□□□ 1.95
CPNE9-204ENST00000491802 SLC38A10Q9HBR0 1119 aa27.26■■□□□ 1.95
CPNE9-204ENST00000491802 IVNS1ABPQ9Y6Y0 642 aa27.26■■□□□ 1.95
CPNE9-204ENST00000491802 IFIT3O14879 490 aaKnown RBP27.25■■□□□ 1.95
CPNE9-204ENST00000491802 ATP2A1O14983 1001 aa27.25■■□□□ 1.95
CPNE9-204ENST00000491802 REC8O95072 547 aa27.25■■□□□ 1.95
CPNE9-204ENST00000491802 HOXC6P09630 235 aa27.25■■□□□ 1.95
CPNE9-204ENST00000491802 SNHG28P0DPA3 235 aa27.25■■□□□ 1.95
CPNE9-204ENST00000491802 COPB2P35606 906 aa27.25■■□□□ 1.95
CPNE9-204ENST00000491802 STAT3P40763 770 aa27.25■■□□□ 1.95
CPNE9-204ENST00000491802 RGS2P41220 211 aa27.25■■□□□ 1.95
CPNE9-204ENST00000491802 ANTXR2P58335 489 aa27.25■■□□□ 1.95
CPNE9-204ENST00000491802 ZNF543Q08ER8 600 aa27.25■■□□□ 1.95
CPNE9-204ENST00000491802 SART3Q15020 963 aaKnown RBP27.25■■□□□ 1.95
CPNE9-204ENST00000491802 RIOX2Q8IUF8 465 aa27.25■■□□□ 1.95
CPNE9-204ENST00000491802 TMEM106CQ9BVX2 250 aa27.25■■□□□ 1.95
CPNE9-204ENST00000491802 TEX13BQ9BXU2 312 aa27.25■■□□□ 1.95
CPNE9-204ENST00000491802 GPCPD1Q9NPB8 672 aa27.25■■□□□ 1.95
CPNE9-204ENST00000491802 ZNFX1Q9P2E3 1918 aaKnown RBP27.24■■□□□ 1.95
CPNE9-204ENST00000491802 ERICH2A1L162 156 aa27.24■■□□□ 1.95
CPNE9-204ENST00000491802 ELNP15502 786 aa27.24■■□□□ 1.95
CPNE9-204ENST00000491802 MAP2K5Q13163 448 aa27.24■■□□□ 1.95
CPNE9-204ENST00000491802 SNRNP48Q6IEG0 339 aaKnown RBP27.24■■□□□ 1.95
CPNE9-204ENST00000491802 TTBK2Q6IQ55 1244 aa27.24■■□□□ 1.95
CPNE9-204ENST00000491802 ABRAQ8N0Z2 381 aa27.24■■□□□ 1.95
CPNE9-204ENST00000491802 CPXCR1Q8N123 301 aa27.24■■□□□ 1.95
CPNE9-204ENST00000491802 APBA2Q99767 749 aa27.24■■□□□ 1.95
CPNE9-204ENST00000491802 PRR12Q9ULL5 1215 aa27.24■■□□□ 1.95
CPNE9-204ENST00000491802 HMGCRP04035 888 aa27.23■■□□□ 1.95
CPNE9-204ENST00000491802 CYP2B6P20813 491 aa27.23■■□□□ 1.95
CPNE9-204ENST00000491802 SLC16A2P36021 539 aa27.23■■□□□ 1.95
CPNE9-204ENST00000491802 RAVER2Q9HCJ3 691 aaKnown RBP27.23■■□□□ 1.95
CPNE9-204ENST00000491802 INHAP05111 366 aa27.22■■□□□ 1.95
CPNE9-204ENST00000491802 CAPN2P17655 700 aa27.22■■□□□ 1.95
CPNE9-204ENST00000491802 OAZ1P54368 228 aa27.22■■□□□ 1.95
CPNE9-204ENST00000491802 WTAPQ15007 396 aa27.22■■□□□ 1.95
CPNE9-204ENST00000491802 TMEM67Q5HYA8 995 aa27.22■■□□□ 1.95
CPNE9-204ENST00000491802 SYDE2Q5VT97 1194 aa27.22■■□□□ 1.95
CPNE9-204ENST00000491802 PRC1O43663 620 aa27.21■■□□□ 1.95
CPNE9-204ENST00000491802 GOLGA8HP0CJ92 632 aa27.21■■□□□ 1.95
CPNE9-204ENST00000491802 ZKSCAN1P17029 563 aaPredicted RBP27.21■■□□□ 1.95
CPNE9-204ENST00000491802 COL9A3Q14050 684 aaPredicted RBP27.21■■□□□ 1.95
CPNE9-204ENST00000491802 MTFR1Q15390 333 aa27.21■■□□□ 1.95
CPNE9-204ENST00000491802 GPATCH4Q5T3I0 446 aaKnown RBP27.21■■□□□ 1.95
CPNE9-204ENST00000491802 BTNL9Q6UXG8 535 aa27.21■■□□□ 1.95
CPNE9-204ENST00000491802 RASEFQ8IZ41 740 aa27.21■■□□□ 1.95
CPNE9-204ENST00000491802 BIN2Q9UBW5 565 aaPredicted RBP27.21■■□□□ 1.95
CPNE9-204ENST00000491802 POTEFA5A3E0 1075 aa27.2■■□□□ 1.94
CPNE9-204ENST00000491802 MYCP01106 439 aaPredicted RBP27.2■■□□□ 1.94
CPNE9-204ENST00000491802 MCM5P33992 734 aa27.2■■□□□ 1.94
CPNE9-204ENST00000491802 SLC4A3P48751 1232 aa27.2■■□□□ 1.94
CPNE9-204ENST00000491802 SNAP25P60880 206 aa27.2■■□□□ 1.94
CPNE9-204ENST00000491802 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.2■■□□□ 1.94
CPNE9-204ENST00000491802 TRIB2Q92519 343 aa27.2■■□□□ 1.94
CPNE9-204ENST00000491802 SENP2Q9HC62 589 aa27.2■■□□□ 1.94
CPNE9-204ENST00000491802 GJB1P08034 283 aa27.19■■□□□ 1.94
CPNE9-204ENST00000491802 CCL5P13501 91 aa27.19■■□□□ 1.94
CPNE9-204ENST00000491802 ADORA2AP29274 412 aa27.19■■□□□ 1.94
CPNE9-204ENST00000491802 ASPRV1Q53RT3 343 aa27.19■■□□□ 1.94
CPNE9-204ENST00000491802 MAP3K21Q5TCX8 1036 aa27.19■■□□□ 1.94
CPNE9-204ENST00000491802 CCDC174Q6PII3 467 aa27.19■■□□□ 1.94
CPNE9-204ENST00000491802 RIPK3Q9Y572 518 aa27.19■■□□□ 1.94
CPNE9-204ENST00000491802 IGHA2P01877 340 aa27.18■■□□□ 1.94
CPNE9-204ENST00000491802 HSPA4P34932 840 aa27.18■■□□□ 1.94
CPNE9-204ENST00000491802 MLLT1Q03111 559 aaPredicted RBP27.18■■□□□ 1.94
CPNE9-204ENST00000491802 KRT32Q14532 448 aa27.18■■□□□ 1.94
CPNE9-204ENST00000491802 IGDCC4Q8TDY8 1250 aa27.18■■□□□ 1.94
CPNE9-204ENST00000491802 NEK1Q96PY6 1258 aa27.18■■□□□ 1.94
CPNE9-204ENST00000491802 RANBP17Q9H2T7 1088 aaKnown RBP27.18■■□□□ 1.94
CPNE9-204ENST00000491802 PAK6Q9NQU5 681 aaPredicted RBP27.18■■□□□ 1.94
CPNE9-204ENST00000491802 ZNF536O15090 1300 aa27.17■■□□□ 1.94
CPNE9-204ENST00000491802 PARP1P09874 1014 aaKnown RBP27.17■■□□□ 1.94
CPNE9-204ENST00000491802 FCER1AP12319 257 aa27.17■■□□□ 1.94
CPNE9-204ENST00000491802 ADCK5Q3MIX3 580 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms