RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 NETO1Q8TDF5 533 aa6.18□□□□□ -1.42
RTN4-215ENST00000491592 HAUS7Q99871 368 aa6.18□□□□□ -1.42
RTN4-215ENST00000491592 KCNH3Q9ULD8 1083 aa6.18□□□□□ -1.42
RTN4-215ENST00000491592 PLAGL2Q9UPG8 496 aa6.18□□□□□ -1.42
RTN4-215ENST00000491592 EIF4G1Q04637 1599 aaKnown RBP6.18□□□□□ -1.42
RTN4-215ENST00000491592 U2SURPO15042 1029 aaKnown RBP6.17□□□□□ -1.42
RTN4-215ENST00000491592 SHOXO15266 292 aa6.17□□□□□ -1.42
RTN4-215ENST00000491592 CBFA2T2O43439 604 aa6.17□□□□□ -1.42
RTN4-215ENST00000491592 DDAH1O94760 285 aa6.17□□□□□ -1.42
RTN4-215ENST00000491592 TP53P04637 393 aaPredicted RBP6.17□□□□□ -1.42
RTN4-215ENST00000491592 FZD5Q13467 585 aa6.17□□□□□ -1.42
RTN4-215ENST00000491592 SNW1Q13573 536 aaKnown RBP6.17□□□□□ -1.42
RTN4-215ENST00000491592 NCAPHQ15003 741 aa6.17□□□□□ -1.42
RTN4-215ENST00000491592 DCAF15Q66K64 600 aa6.17□□□□□ -1.42
RTN4-215ENST00000491592 MRM1Q6IN84 353 aaKnown RBP6.17□□□□□ -1.42
RTN4-215ENST00000491592 APBB1IPQ7Z5R6 666 aaPredicted RBP6.17□□□□□ -1.42
RTN4-215ENST00000491592 ST7Q9NRC1 585 aa6.17□□□□□ -1.42
RTN4-215ENST00000491592 ADGRE2Q9UHX3 823 aa6.17□□□□□ -1.42
RTN4-215ENST00000491592 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.17□□□□□ -1.42
RTN4-215ENST00000491592 PCDHB12Q9Y5F1 795 aa6.17□□□□□ -1.42
RTN4-215ENST00000491592 ST14Q9Y5Y6 855 aa6.17□□□□□ -1.42
RTN4-215ENST00000491592 BAZ1AQ9NRL2 1556 aaPredicted RBP6.17□□□□□ -1.42
RTN4-215ENST00000491592 H3BS24 57 aa6.16□□□□□ -1.42
RTN4-215ENST00000491592 GJB6O95452 261 aa6.16□□□□□ -1.42
RTN4-215ENST00000491592 AUHQ13825 339 aaKnown RBP6.16□□□□□ -1.42
RTN4-215ENST00000491592 NBPF9Q3BBW0 867 aa6.16□□□□□ -1.42
RTN4-215ENST00000491592 SOGA3Q5TF21 947 aa6.16□□□□□ -1.42
RTN4-215ENST00000491592 CDKAL1Q5VV42 579 aa6.16□□□□□ -1.42
RTN4-215ENST00000491592 KIAA1211LQ6NV74 962 aa6.16□□□□□ -1.42
RTN4-215ENST00000491592 TMTC2Q8N394 836 aa6.16□□□□□ -1.42
RTN4-215ENST00000491592 OSBPL2Q9H1P3 480 aa6.16□□□□□ -1.42
RTN4-215ENST00000491592 ANGEL1Q9UNK9 670 aaKnown RBP6.16□□□□□ -1.42
RTN4-215ENST00000491592 SBNO2Q9Y2G9 1366 aa6.16□□□□□ -1.42
RTN4-215ENST00000491592 NACADO15069 1562 aa6.15□□□□□ -1.42
RTN4-215ENST00000491592 TMEM265A0A087WTH1 108 aa6.15□□□□□ -1.42
RTN4-215ENST00000491592 TLDC2A0PJX2 215 aa6.15□□□□□ -1.42
RTN4-215ENST00000491592 SHISA3A0PJX4 238 aa6.15□□□□□ -1.42
RTN4-215ENST00000491592 EPHX1P07099 455 aa6.15□□□□□ -1.42
RTN4-215ENST00000491592 NMIQ13287 307 aaPredicted RBP6.15□□□□□ -1.42
RTN4-215ENST00000491592 HEATR6Q6AI08 1181 aaKnown RBP6.15□□□□□ -1.42
RTN4-215ENST00000491592 TMC3Q7Z5M5 1100 aa6.15□□□□□ -1.42
RTN4-215ENST00000491592 C7orf61Q8IZ16 206 aa6.15□□□□□ -1.42
RTN4-215ENST00000491592 HRASLS5Q96KN8 279 aa6.15□□□□□ -1.42
RTN4-215ENST00000491592 GPR62Q9BZJ7 368 aa6.15□□□□□ -1.42
RTN4-215ENST00000491592 LNPKQ9C0E8 428 aa6.15□□□□□ -1.42
RTN4-215ENST00000491592 PRDM14Q9GZV8 571 aa6.15□□□□□ -1.42
RTN4-215ENST00000491592 KLHL25Q9H0H3 589 aa6.15□□□□□ -1.42
RTN4-215ENST00000491592 SIRPGQ9P1W8 387 aa6.15□□□□□ -1.42
RTN4-215ENST00000491592 FBXL21Q9UKT6 434 aa6.15□□□□□ -1.42
RTN4-215ENST00000491592 PITPNM2Q9BZ72 1349 aa6.15□□□□□ -1.43
RTN4-215ENST00000491592 MROH2BQ7Z745 1585 aa6.14□□□□□ -1.43
RTN4-215ENST00000491592 SIGLEC6O43699 453 aa6.14□□□□□ -1.43
RTN4-215ENST00000491592 SUSD5O60279 629 aa6.14□□□□□ -1.43
RTN4-215ENST00000491592 PEX14O75381 377 aa6.14□□□□□ -1.43
RTN4-215ENST00000491592 PTPROQ16827 1216 aa6.14□□□□□ -1.43
RTN4-215ENST00000491592 LONRF3Q496Y0 759 aa6.14□□□□□ -1.43
RTN4-215ENST00000491592 THAP5Q7Z6K1 395 aa6.14□□□□□ -1.43
RTN4-215ENST00000491592 HSPA12BQ96MM6 686 aa6.14□□□□□ -1.43
RTN4-215ENST00000491592 HDAC8Q9BY41 377 aa6.14□□□□□ -1.43
RTN4-215ENST00000491592 GBP3Q9H0R5 595 aa6.14□□□□□ -1.43
RTN4-215ENST00000491592 ASCC2Q9H1I8 757 aaPredicted RBP6.14□□□□□ -1.43
RTN4-215ENST00000491592 TRIT1Q9H3H1 467 aaKnown RBP6.14□□□□□ -1.43
RTN4-215ENST00000491592 GP6Q9HCN6 339 aa6.14□□□□□ -1.43
RTN4-215ENST00000491592 GFOD1Q9NXC2 390 aa6.14□□□□□ -1.43
RTN4-215ENST00000491592 PRR13Q9NZ81 148 aa6.14□□□□□ -1.43
RTN4-215ENST00000491592 MSRB2Q9Y3D2 182 aa6.14□□□□□ -1.43
RTN4-215ENST00000491592 ZNF451Q9Y4E5 1061 aa6.14□□□□□ -1.43
RTN4-215ENST00000491592 SNX11Q9Y5W9 270 aa6.14□□□□□ -1.43
RTN4-215ENST00000491592 ANKRD34BA5PLL1 514 aa6.13□□□□□ -1.43
RTN4-215ENST00000491592 CCDC85CA6NKD9 419 aa6.13□□□□□ -1.43
RTN4-215ENST00000491592 PRAMEF1O95521 474 aa6.13□□□□□ -1.43
RTN4-215ENST00000491592 NAT2P11245 290 aa6.13□□□□□ -1.43
RTN4-215ENST00000491592 SRFP11831 508 aa6.13□□□□□ -1.43
RTN4-215ENST00000491592 ITGA4P13612 1032 aa6.13□□□□□ -1.43
RTN4-215ENST00000491592 CD247P20963 164 aa6.13□□□□□ -1.43
RTN4-215ENST00000491592 RASA3Q14644 834 aa6.13□□□□□ -1.43
RTN4-215ENST00000491592 CLEC16AQ2KHT3 1053 aa6.13□□□□□ -1.43
RTN4-215ENST00000491592 ANKRD39Q53RE8 183 aa6.13□□□□□ -1.43
RTN4-215ENST00000491592 EEPD1Q7L9B9 569 aa6.13□□□□□ -1.43
RTN4-215ENST00000491592 VSIG10LQ86VR7 867 aa6.13□□□□□ -1.43
RTN4-215ENST00000491592 CCAR1Q8IX12 1150 aaKnown RBP6.13□□□□□ -1.43
RTN4-215ENST00000491592 ZCRB1Q8TBF4 217 aaKnown RBP6.13□□□□□ -1.43
RTN4-215ENST00000491592 MISP3Q96FF7 219 aa6.13□□□□□ -1.43
RTN4-215ENST00000491592 DUSP15Q9H1R2 295 aaPredicted RBP6.13□□□□□ -1.43
RTN4-215ENST00000491592 SEMA3GQ9NS98 782 aa6.13□□□□□ -1.43
RTN4-215ENST00000491592 BSDC1Q9NW68 430 aaPredicted RBP6.13□□□□□ -1.43
RTN4-215ENST00000491592 GPATCH2Q9NW75 528 aa6.13□□□□□ -1.43
RTN4-215ENST00000491592 SNTG2Q9NY99 539 aa6.13□□□□□ -1.43
RTN4-215ENST00000491592 WHRNQ9P202 907 aa6.13□□□□□ -1.43
RTN4-215ENST00000491592 KLHL42Q9P2K6 505 aa6.13□□□□□ -1.43
RTN4-215ENST00000491592 SUSD2Q9UGT4 822 aa6.13□□□□□ -1.43
RTN4-215ENST00000491592 GOLGA3Q08378 1498 aa6.13□□□□□ -1.43
RTN4-215ENST00000491592 WIZO95785 1651 aa6.13□□□□□ -1.43
RTN4-215ENST00000491592 CCDC194A0A1B0GVG4 234 aa6.12□□□□□ -1.43
RTN4-215ENST00000491592 MAP4K4O95819 1239 aaPredicted RBP6.12□□□□□ -1.43
RTN4-215ENST00000491592 PRNPP04156 253 aa6.12□□□□□ -1.43
RTN4-215ENST00000491592 ZNF143P52747 638 aaPredicted RBP6.12□□□□□ -1.43
RTN4-215ENST00000491592 PRKCQQ04759 706 aa6.12□□□□□ -1.43
RTN4-215ENST00000491592 TCEAL1Q15170 157 aa6.12□□□□□ -1.43
RTN4-215ENST00000491592 SLC10A6Q3KNW5 377 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms