RNA–Protein interactions for RNA: ENST00000491332.1

NCSTN-213, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-213ENST00000491332 DSCC1Q9BVC3 393 aa8.14□□□□□ -1.11
NCSTN-213ENST00000491332 DUSP15Q9H1R2 295 aaPredicted RBP8.14□□□□□ -1.11
NCSTN-213ENST00000491332 LRRC4CQ9HCJ2 640 aa8.14□□□□□ -1.11
NCSTN-213ENST00000491332 PLAGL2Q9UPG8 496 aa8.14□□□□□ -1.11
NCSTN-213ENST00000491332 DIS3Q9Y2L1 958 aaKnown RBP8.14□□□□□ -1.11
NCSTN-213ENST00000491332 PRR19A6NJB7 356 aa8.13□□□□□ -1.11
NCSTN-213ENST00000491332 FAM155AB1AL88 458 aaPredicted RBP8.13□□□□□ -1.11
NCSTN-213ENST00000491332 GRIA2P42262 883 aa8.13□□□□□ -1.11
NCSTN-213ENST00000491332 CTSKP43235 329 aa8.13□□□□□ -1.11
NCSTN-213ENST00000491332 HSP90AA2PQ14568 343 aaPredicted RBP8.13□□□□□ -1.11
NCSTN-213ENST00000491332 PPP2R5DQ14738 602 aa8.13□□□□□ -1.11
NCSTN-213ENST00000491332 PLEKHG4Q58EX7 1191 aa8.13□□□□□ -1.11
NCSTN-213ENST00000491332 YOD1Q5VVQ6 348 aaPredicted RBP8.13□□□□□ -1.11
NCSTN-213ENST00000491332 ZNF662Q6ZS27 426 aa8.13□□□□□ -1.11
NCSTN-213ENST00000491332 CRACR2BQ8N4Y2 399 aaPredicted RBP8.13□□□□□ -1.11
NCSTN-213ENST00000491332 ENOX1Q8TC92 643 aaKnown RBP8.13□□□□□ -1.11
NCSTN-213ENST00000491332 AARSD1Q9BTE6 412 aaKnown RBP8.13□□□□□ -1.11
NCSTN-213ENST00000491332 ASCC2Q9H1I8 757 aaPredicted RBP8.13□□□□□ -1.11
NCSTN-213ENST00000491332 TRAV20A0A0B4J274 112 aa8.12□□□□□ -1.11
NCSTN-213ENST00000491332 H0Y8X5 98 aa8.12□□□□□ -1.11
NCSTN-213ENST00000491332 MEIS1O00470 390 aa8.12□□□□□ -1.11
NCSTN-213ENST00000491332 GRB10Q13322 594 aa8.12□□□□□ -1.11
NCSTN-213ENST00000491332 TMEM67Q5HYA8 995 aa8.12□□□□□ -1.11
NCSTN-213ENST00000491332 CDKAL1Q5VV42 579 aa8.12□□□□□ -1.11
NCSTN-213ENST00000491332 POMZP3Q6PJE2 187 aa8.12□□□□□ -1.11
NCSTN-213ENST00000491332 SLC51AQ86UW1 340 aa8.12□□□□□ -1.11
NCSTN-213ENST00000491332 BTN2A2Q8WVV5 523 aa8.12□□□□□ -1.11
NCSTN-213ENST00000491332 EXOC2Q96KP1 924 aa8.12□□□□□ -1.11
NCSTN-213ENST00000491332 SLC26A8Q96RN1 970 aa8.12□□□□□ -1.11
NCSTN-213ENST00000491332 CWC22Q9HCG8 908 aaKnown RBP8.12□□□□□ -1.11
NCSTN-213ENST00000491332 SF3B6Q9Y3B4 125 aaKnown RBP8.12□□□□□ -1.11
NCSTN-213ENST00000491332 CYP26A1O43174 497 aa8.11□□□□□ -1.11
NCSTN-213ENST00000491332 KCNH1O95259 989 aa8.11□□□□□ -1.11
NCSTN-213ENST00000491332 CLCN7P51798 805 aa8.11□□□□□ -1.11
NCSTN-213ENST00000491332 CLEC16AQ2KHT3 1053 aa8.11□□□□□ -1.11
NCSTN-213ENST00000491332 ZC3H12BQ5HYM0 836 aaKnown RBP8.11□□□□□ -1.11
NCSTN-213ENST00000491332 GTF2IRD2BQ6EKJ0 949 aa8.11□□□□□ -1.11
NCSTN-213ENST00000491332 CRTC3Q6UUV7 619 aa8.11□□□□□ -1.11
NCSTN-213ENST00000491332 GTF2IRD2Q86UP8 949 aa8.11□□□□□ -1.11
NCSTN-213ENST00000491332 PLD6Q8N2A8 252 aaKnown RBP8.11□□□□□ -1.11
NCSTN-213ENST00000491332 DAGLBQ8NCG7 672 aa8.11□□□□□ -1.11
NCSTN-213ENST00000491332 HSPA12BQ96MM6 686 aa8.11□□□□□ -1.11
NCSTN-213ENST00000491332 ZDHHC15Q96MV8 337 aa8.11□□□□□ -1.11
NCSTN-213ENST00000491332 PIM2Q9P1W9 311 aa8.11□□□□□ -1.11
NCSTN-213ENST00000491332 SBNO2Q9Y2G9 1366 aa8.1□□□□□ -1.11
NCSTN-213ENST00000491332 WASH4PA8MWX3 477 aa8.1□□□□□ -1.11
NCSTN-213ENST00000491332 VAMP4O75379 141 aa8.1□□□□□ -1.11
NCSTN-213ENST00000491332 FGFR1P11362 822 aa8.1□□□□□ -1.11
NCSTN-213ENST00000491332 TKFCQ3LXA3 575 aa8.1□□□□□ -1.11
NCSTN-213ENST00000491332 FAM209AQ5JX71 171 aa8.1□□□□□ -1.11
NCSTN-213ENST00000491332 C16orf86Q6ZW13 317 aa8.1□□□□□ -1.11
NCSTN-213ENST00000491332 NETO1Q8TDF5 533 aa8.1□□□□□ -1.11
NCSTN-213ENST00000491332 KISS1RQ969F8 398 aaPredicted RBP8.1□□□□□ -1.11
NCSTN-213ENST00000491332 TCTN2Q96GX1 697 aa8.1□□□□□ -1.11
NCSTN-213ENST00000491332 TRIT1Q9H3H1 467 aaKnown RBP8.1□□□□□ -1.11
NCSTN-213ENST00000491332 SEMA3GQ9NS98 782 aa8.1□□□□□ -1.11
NCSTN-213ENST00000491332 GPATCH2Q9NW75 528 aa8.1□□□□□ -1.11
NCSTN-213ENST00000491332 ZC3H7BQ9UGR2 993 aaKnown RBP8.1□□□□□ -1.11
NCSTN-213ENST00000491332 H3BS24 57 aa8.09□□□□□ -1.11
NCSTN-213ENST00000491332 GSNP06396 782 aa8.09□□□□□ -1.11
NCSTN-213ENST00000491332 FOSL1P15407 271 aa8.09□□□□□ -1.11
NCSTN-213ENST00000491332 L1CAMP32004 1257 aa8.09□□□□□ -1.11
NCSTN-213ENST00000491332 SF1Q15637 639 aaKnown RBP8.09□□□□□ -1.11
NCSTN-213ENST00000491332 IFI16Q16666 785 aaKnown RBP8.09□□□□□ -1.11
NCSTN-213ENST00000491332 THAP5Q7Z6K1 395 aa8.09□□□□□ -1.11
NCSTN-213ENST00000491332 KIAA0907Q7Z7F0 614 aaPredicted RBP8.09□□□□□ -1.11
NCSTN-213ENST00000491332 TSPYL5Q86VY4 417 aaPredicted RBP8.09□□□□□ -1.11
NCSTN-213ENST00000491332 ZNF655Q8N720 491 aaPredicted RBP8.09□□□□□ -1.11
NCSTN-213ENST00000491332 OSBP2Q969R2 916 aa8.09□□□□□ -1.11
NCSTN-213ENST00000491332 MCMBPQ9BTE3 642 aa8.09□□□□□ -1.11
NCSTN-213ENST00000491332 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.09□□□□□ -1.11
NCSTN-213ENST00000491332 TRBV23-1A0A0A0MS06 115 aa8.08□□□□□ -1.12
NCSTN-213ENST00000491332 PRODHO43272 600 aa8.08□□□□□ -1.12
NCSTN-213ENST00000491332 ASMTLO95671 621 aa8.08□□□□□ -1.12
NCSTN-213ENST00000491332 IGHA1P01876 353 aa8.08□□□□□ -1.12
NCSTN-213ENST00000491332 PABPC1P11940 636 aaKnown RBP8.08□□□□□ -1.12
NCSTN-213ENST00000491332 AMPD2Q01433 879 aa8.08□□□□□ -1.12
NCSTN-213ENST00000491332 CYP4F3Q08477 520 aa8.08□□□□□ -1.12
NCSTN-213ENST00000491332 GAB4Q2WGN9 574 aa8.08□□□□□ -1.12
NCSTN-213ENST00000491332 CDC6Q99741 560 aa8.08□□□□□ -1.12
NCSTN-213ENST00000491332 IER2Q9BTL4 223 aa8.08□□□□□ -1.12
NCSTN-213ENST00000491332 DHRS4Q9BTZ2 278 aa8.08□□□□□ -1.12
NCSTN-213ENST00000491332 NKX2-4Q9H2Z4 354 aa8.08□□□□□ -1.12
NCSTN-213ENST00000491332 ZSWIM5Q9P217 1185 aa8.08□□□□□ -1.12
NCSTN-213ENST00000491332 GPR55Q9Y2T6 319 aaPredicted RBP8.08□□□□□ -1.12
NCSTN-213ENST00000491332 MRPS23Q9Y3D9 190 aaKnown RBP8.08□□□□□ -1.12
NCSTN-213ENST00000491332 PITPNM2Q9BZ72 1349 aa8.07□□□□□ -1.12
NCSTN-213ENST00000491332 CCDC163A0A0D9SF12 145 aa8.07□□□□□ -1.12
NCSTN-213ENST00000491332 PPP1R12AO14974 1030 aaPredicted RBP8.07□□□□□ -1.12
NCSTN-213ENST00000491332 CLSTN1O94985 981 aa8.07□□□□□ -1.12
NCSTN-213ENST00000491332 TPP2P29144 1249 aaPredicted RBP8.07□□□□□ -1.12
NCSTN-213ENST00000491332 HOXA10P31260 410 aaPredicted RBP8.07□□□□□ -1.12
NCSTN-213ENST00000491332 BMP8BP34820 402 aa8.07□□□□□ -1.12
NCSTN-213ENST00000491332 GFRA1P56159 465 aa8.07□□□□□ -1.12
NCSTN-213ENST00000491332 POU4F1Q01851 419 aa8.07□□□□□ -1.12
NCSTN-213ENST00000491332 TCEA2Q15560 299 aa8.07□□□□□ -1.12
NCSTN-213ENST00000491332 DPY19L1Q2PZI1 675 aa8.07□□□□□ -1.12
NCSTN-213ENST00000491332 NSMFQ6X4W1 530 aa8.07□□□□□ -1.12
NCSTN-213ENST00000491332 SCUBE1Q8IWY4 988 aa8.07□□□□□ -1.12
NCSTN-213ENST00000491332 UBE2FQ969M7 185 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms