RNA–Protein interactions for RNA: ENST00000490690.1

SHROOM3-209, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-209ENST00000490690 TRPA1O75762 1119 aa23.1■■□□□ 1.29
SHROOM3-209ENST00000490690 OAZ1P54368 228 aa23.1■■□□□ 1.29
SHROOM3-209ENST00000490690 CRHR2Q13324 411 aa23.1■■□□□ 1.29
SHROOM3-209ENST00000490690 RTN1Q16799 776 aa23.1■■□□□ 1.29
SHROOM3-209ENST00000490690 FAM110CQ1W6H9 321 aa23.1■■□□□ 1.29
SHROOM3-209ENST00000490690 SYDE2Q5VT97 1194 aa23.1■■□□□ 1.29
SHROOM3-209ENST00000490690 P2RX7Q99572 595 aaKnown RBP23.1■■□□□ 1.29
SHROOM3-209ENST00000490690 KIF2CQ99661 725 aa23.1■■□□□ 1.29
SHROOM3-209ENST00000490690 GOLGA8AA7E2F4 631 aa23.09■■□□□ 1.29
SHROOM3-209ENST00000490690 CYP2C8P10632 490 aa23.09■■□□□ 1.29
SHROOM3-209ENST00000490690 APOBRQ0VD83 1088 aa23.09■■□□□ 1.29
SHROOM3-209ENST00000490690 TOB2Q14106 344 aaPredicted RBP23.09■■□□□ 1.29
SHROOM3-209ENST00000490690 ARHGEF6Q15052 776 aa23.09■■□□□ 1.29
SHROOM3-209ENST00000490690 KIFC2Q96AC6 838 aa23.09■■□□□ 1.29
SHROOM3-209ENST00000490690 SENP2Q9HC62 589 aa23.09■■□□□ 1.29
SHROOM3-209ENST00000490690 GPCPD1Q9NPB8 672 aa23.09■■□□□ 1.29
SHROOM3-209ENST00000490690 GPHNQ9NQX3 736 aaPredicted RBP23.09■■□□□ 1.29
SHROOM3-209ENST00000490690 RBM27Q9P2N5 1060 aaKnown RBP23.09■■□□□ 1.29
SHROOM3-209ENST00000490690 MAD2L2Q9UI95 211 aa23.09■■□□□ 1.29
SHROOM3-209ENST00000490690 ADAMTS5Q9UNA0 930 aa23.09■■□□□ 1.29
SHROOM3-209ENST00000490690 NID2Q14112 1375 aa23.09■■□□□ 1.29
SHROOM3-209ENST00000490690 FRMPD2Q68DX3 1309 aaPredicted RBP23.08■■□□□ 1.29
SHROOM3-209ENST00000490690 AK2P54819 239 aa23.08■■□□□ 1.29
SHROOM3-209ENST00000490690 ZSCAN31Q96LW9 406 aaPredicted RBP23.08■■□□□ 1.29
SHROOM3-209ENST00000490690 MORF4L1Q9UBU8 362 aa23.08■■□□□ 1.29
SHROOM3-209ENST00000490690 VWA5AO00534 786 aa23.07■■□□□ 1.28
SHROOM3-209ENST00000490690 ATP2A1O14983 1001 aa23.07■■□□□ 1.28
SHROOM3-209ENST00000490690 COL9A3Q14050 684 aaPredicted RBP23.07■■□□□ 1.28
SHROOM3-209ENST00000490690 GPRC5AQ8NFJ5 357 aa23.07■■□□□ 1.28
SHROOM3-209ENST00000490690 SPZ1Q9BXG8 430 aa23.07■■□□□ 1.28
SHROOM3-209ENST00000490690 BRPF3Q9ULD4 1205 aa23.07■■□□□ 1.28
SHROOM3-209ENST00000490690 LIMCH1Q9UPQ0 1083 aa23.07■■□□□ 1.28
SHROOM3-209ENST00000490690 ADGRA2Q96PE1 1338 aa23.07■■□□□ 1.28
SHROOM3-209ENST00000490690 CDKL5O76039 1030 aa23.06■■□□□ 1.28
SHROOM3-209ENST00000490690 PDIA3P30101 505 aaKnown RBP23.06■■□□□ 1.28
SHROOM3-209ENST00000490690 KIF22Q14807 665 aa23.06■■□□□ 1.28
SHROOM3-209ENST00000490690 C17orf99Q6UX52 265 aa23.06■■□□□ 1.28
SHROOM3-209ENST00000490690 CCAR1Q8IX12 1150 aaKnown RBP23.06■■□□□ 1.28
SHROOM3-209ENST00000490690 ATG4CQ96DT6 458 aa23.06■■□□□ 1.28
SHROOM3-209ENST00000490690 SLKQ9H2G2 1235 aaPredicted RBP23.06■■□□□ 1.28
SHROOM3-209ENST00000490690 SLC38A10Q9HBR0 1119 aa23.06■■□□□ 1.28
SHROOM3-209ENST00000490690 SH2B1Q9NRF2 756 aaPredicted RBP23.06■■□□□ 1.28
SHROOM3-209ENST00000490690 FBXO28Q9NVF7 368 aa23.06■■□□□ 1.28
SHROOM3-209ENST00000490690 PRR12Q9ULL5 1215 aa23.06■■□□□ 1.28
SHROOM3-209ENST00000490690 CPLX1O14810 134 aa23.05■■□□□ 1.28
SHROOM3-209ENST00000490690 SLC25A27O95847 323 aa23.05■■□□□ 1.28
SHROOM3-209ENST00000490690 GOLGA8HP0CJ92 632 aa23.05■■□□□ 1.28
SHROOM3-209ENST00000490690 MYL10Q9BUA6 226 aa23.05■■□□□ 1.28
SHROOM3-209ENST00000490690 TEX13BQ9BXU2 312 aa23.05■■□□□ 1.28
SHROOM3-209ENST00000490690 RANBP17Q9H2T7 1088 aaKnown RBP23.05■■□□□ 1.28
SHROOM3-209ENST00000490690 SEC63Q9UGP8 760 aaKnown RBP23.05■■□□□ 1.28
SHROOM3-209ENST00000490690 BCRP11274 1271 aa23.04■■□□□ 1.28
SHROOM3-209ENST00000490690 ERVK-9P63128 1117 aa23.04■■□□□ 1.28
SHROOM3-209ENST00000490690 ERVK-24P63145 666 aa23.04■■□□□ 1.28
SHROOM3-209ENST00000490690 TKFCQ3LXA3 575 aa23.04■■□□□ 1.28
SHROOM3-209ENST00000490690 SAMD1Q6SPF0 538 aaPredicted RBP23.04■■□□□ 1.28
SHROOM3-209ENST00000490690 TMTC3Q6ZXV5 915 aa23.04■■□□□ 1.28
SHROOM3-209ENST00000490690 SHCBP1Q8NEM2 672 aa23.04■■□□□ 1.28
SHROOM3-209ENST00000490690 PAGR1Q9BTK6 254 aa23.04■■□□□ 1.28
SHROOM3-209ENST00000490690 RIOX1Q9H6W3 641 aa23.04■■□□□ 1.28
SHROOM3-209ENST00000490690 TBC1D8O95759 1140 aa23.03■■□□□ 1.28
SHROOM3-209ENST00000490690 CTCFP49711 727 aaPredicted RBP23.03■■□□□ 1.28
SHROOM3-209ENST00000490690 SP3Q02447 781 aa23.03■■□□□ 1.28
SHROOM3-209ENST00000490690 TTBK2Q6IQ55 1244 aa23.03■■□□□ 1.28
SHROOM3-209ENST00000490690 ADGRF4Q8IZF3 695 aa23.03■■□□□ 1.28
SHROOM3-209ENST00000490690 STAG2Q8N3U4 1231 aa23.03■■□□□ 1.28
SHROOM3-209ENST00000490690 ANKRD13CQ8N6S4 541 aa23.03■■□□□ 1.28
SHROOM3-209ENST00000490690 RRP36Q96EU6 259 aaKnown RBP23.03■■□□□ 1.28
SHROOM3-209ENST00000490690 MAF1Q9H063 256 aa23.03■■□□□ 1.28
SHROOM3-209ENST00000490690 RBPJLQ9UBG7 517 aa23.03■■□□□ 1.28
SHROOM3-209ENST00000490690 GPR25O00155 361 aa23.02■■□□□ 1.28
SHROOM3-209ENST00000490690 PFKFB2O60825 505 aa23.02■■□□□ 1.28
SHROOM3-209ENST00000490690 GNRH1P01148 92 aa23.02■■□□□ 1.28
SHROOM3-209ENST00000490690 RXRAP19793 462 aa23.02■■□□□ 1.28
SHROOM3-209ENST00000490690 MAPK4P31152 587 aa23.02■■□□□ 1.28
SHROOM3-209ENST00000490690 SLC16A2P36021 539 aa23.02■■□□□ 1.28
SHROOM3-209ENST00000490690 STAT3P40763 770 aa23.02■■□□□ 1.28
SHROOM3-209ENST00000490690 AKAP17AQ02040 695 aaKnown RBP23.02■■□□□ 1.28
SHROOM3-209ENST00000490690 CCDC144CPQ8IYA2 1237 aa23.02■■□□□ 1.28
SHROOM3-209ENST00000490690 ERO1AQ96HE7 468 aa23.02■■□□□ 1.28
SHROOM3-209ENST00000490690 UBA5Q9GZZ9 404 aa23.02■■□□□ 1.28
SHROOM3-209ENST00000490690 SPATC1LQ9H0A9 340 aa23.02■■□□□ 1.28
SHROOM3-209ENST00000490690 MROH8Q9H579 483 aa23.02■■□□□ 1.28
SHROOM3-209ENST00000490690 CWC22Q9HCG8 908 aaKnown RBP23.02■■□□□ 1.28
SHROOM3-209ENST00000490690 FBXO40Q9UH90 709 aa23.02■■□□□ 1.28
SHROOM3-209ENST00000490690 CPA4Q9UI42 421 aa23.02■■□□□ 1.28
SHROOM3-209ENST00000490690 hCG_1984214I3L0E3 225 aa23.01■■□□□ 1.27
SHROOM3-209ENST00000490690 ZBTB5O15062 677 aa23.01■■□□□ 1.27
SHROOM3-209ENST00000490690 FKTNO75072 461 aa23.01■■□□□ 1.27
SHROOM3-209ENST00000490690 ICAM1P05362 532 aa23.01■■□□□ 1.27
SHROOM3-209ENST00000490690 PLS1Q14651 629 aa23.01■■□□□ 1.27
SHROOM3-209ENST00000490690 RASGRP2Q7LDG7 609 aa23.01■■□□□ 1.27
SHROOM3-209ENST00000490690 RIOX2Q8IUF8 465 aa23.01■■□□□ 1.27
SHROOM3-209ENST00000490690 TRIM22Q8IYM9 498 aa23.01■■□□□ 1.27
SHROOM3-209ENST00000490690 ZNF713Q8N859 430 aaPredicted RBP23.01■■□□□ 1.27
SHROOM3-209ENST00000490690 TPCN1Q9ULQ1 816 aa23.01■■□□□ 1.27
SHROOM3-209ENST00000490690 HPS5Q9UPZ3 1129 aa23.01■■□□□ 1.27
SHROOM3-209ENST00000490690 HSPA1AP0DMV8 641 aaKnown RBP23■■□□□ 1.27
SHROOM3-209ENST00000490690 HSPA1BP0DMV9 641 aaKnown RBP23■■□□□ 1.27
SHROOM3-209ENST00000490690 CDC37Q16543 378 aaPredicted RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms