RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 RAB20Q9NX57 234 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 DONSONQ9NYP3 566 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 DDX41Q9UJV9 622 aaKnown RBP9.72□□□□□ -0.85
LSAMP-205ENST00000490035 SERPINA10Q9UK55 444 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 JRKLQ9Y4A0 524 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 ZFYVE16Q7Z3T8 1539 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 RIOK3O14730 519 aaKnown RBP9.72□□□□□ -0.85
LSAMP-205ENST00000490035 PALM2Q8IXS6 379 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 CCDC17Q96LX7 622 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 ATG3Q9NT62 314 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 ARMCX3Q9UH62 379 aaPredicted RBP9.72□□□□□ -0.85
LSAMP-205ENST00000490035 TSPOAP1O95153 1857 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 PFKFB2O60825 505 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 TNNC2P02585 160 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 GAP43P17677 238 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 TMOD1P28289 359 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 KRT40Q6A162 431 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 C1orf112Q9NSG2 853 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 ADCY10Q96PN6 1610 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 WDR17Q8IZU2 1322 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 PASKQ96RG2 1323 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 ZNF233A6NK53 670 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 PDE6CP51160 858 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 ALCAMQ13740 583 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 PLCB4Q15147 1175 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 GSDMAQ96QA5 445 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 ADPGKQ9BRR6 497 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 ZSWIM6Q9HCJ5 1215 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 ZNF219Q9P2Y4 722 aaPredicted RBP9.72□□□□□ -0.85
LSAMP-205ENST00000490035 ZBTB24O43167 697 aaPredicted RBP9.72□□□□□ -0.85
LSAMP-205ENST00000490035 RLBP1P12271 317 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 CTSWP56202 376 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 RPS6KA2Q15349 733 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 SRRM1Q8IYB3 904 aaKnown RBP9.72□□□□□ -0.85
LSAMP-205ENST00000490035 BLIDQ8IZY5 108 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 CLEC11AQ9Y240 323 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 GNPATO15228 680 aa9.71□□□□□ -0.85
LSAMP-205ENST00000490035 KPNA2P52292 529 aaKnown RBP9.71□□□□□ -0.85
LSAMP-205ENST00000490035 KRT71Q3SY84 523 aa9.71□□□□□ -0.85
LSAMP-205ENST00000490035 RABGGTAQ92696 567 aa9.71□□□□□ -0.85
LSAMP-205ENST00000490035 CARD6Q9BX69 1037 aa9.71□□□□□ -0.85
LSAMP-205ENST00000490035 CCPG1Q9ULG6 757 aa9.71□□□□□ -0.85
LSAMP-205ENST00000490035 KCNJ18B7U540 433 aa9.71□□□□□ -0.85
LSAMP-205ENST00000490035 HIP1RO75146 1068 aa9.71□□□□□ -0.85
LSAMP-205ENST00000490035 ATP2B4P23634 1241 aa9.71□□□□□ -0.85
LSAMP-205ENST00000490035 KCNJ12Q14500 433 aa9.71□□□□□ -0.85
LSAMP-205ENST00000490035 PRPSAP1Q14558 356 aa9.71□□□□□ -0.85
LSAMP-205ENST00000490035 MYSM1Q5VVJ2 828 aa9.71□□□□□ -0.85
LSAMP-205ENST00000490035 SPATA1Q5VX52 437 aa9.71□□□□□ -0.85
LSAMP-205ENST00000490035 NCAPH2Q6IBW4 605 aa9.71□□□□□ -0.85
LSAMP-205ENST00000490035 MAP7D3Q8IWC1 876 aa9.71□□□□□ -0.85
LSAMP-205ENST00000490035 NACA2Q9H009 215 aa9.71□□□□□ -0.85
LSAMP-205ENST00000490035 DRC3Q9H069 523 aa9.71□□□□□ -0.85
LSAMP-205ENST00000490035 ZBTB21Q9ULJ3 1066 aa9.71□□□□□ -0.85
LSAMP-205ENST00000490035 CDC42BPAQ5VT25 1732 aa9.71□□□□□ -0.85
LSAMP-205ENST00000490035 CDC42BPBQ9Y5S2 1711 aa9.71□□□□□ -0.85
LSAMP-205ENST00000490035 STX2P32856 288 aa9.71□□□□□ -0.85
LSAMP-205ENST00000490035 ZSCAN10Q96SZ4 725 aaPredicted RBP9.71□□□□□ -0.85
LSAMP-205ENST00000490035 ZMYND15Q9H091 742 aa9.71□□□□□ -0.85
LSAMP-205ENST00000490035 CCDC87Q9NVE4 849 aa9.71□□□□□ -0.85
LSAMP-205ENST00000490035 ZNF532Q9HCE3 1301 aa9.71□□□□□ -0.85
LSAMP-205ENST00000490035 CDC37Q16543 378 aaPredicted RBP9.71□□□□□ -0.85
LSAMP-205ENST00000490035 ASPRV1Q53RT3 343 aa9.71□□□□□ -0.85
LSAMP-205ENST00000490035 SSH3Q8TE77 659 aa9.71□□□□□ -0.85
LSAMP-205ENST00000490035 SDCCAG3Q96C92 435 aa9.71□□□□□ -0.85
LSAMP-205ENST00000490035 LPXNO60711 386 aa9.71□□□□□ -0.86
LSAMP-205ENST00000490035 ZBTB38Q8NAP3 1195 aaPredicted RBP9.71□□□□□ -0.86
LSAMP-205ENST00000490035 DHTKD1Q96HY7 919 aaPredicted RBP9.71□□□□□ -0.86
LSAMP-205ENST00000490035 CDHR1Q96JP9 859 aa9.71□□□□□ -0.86
LSAMP-205ENST00000490035 SRGAP2BP0DMP2 458 aa9.71□□□□□ -0.86
LSAMP-205ENST00000490035 NEK8Q86SG6 692 aa9.71□□□□□ -0.86
LSAMP-205ENST00000490035 TRERF1Q96PN7 1200 aa9.71□□□□□ -0.86
LSAMP-205ENST00000490035 ARMT1Q9H993 441 aa9.71□□□□□ -0.86
LSAMP-205ENST00000490035 LMBRD1Q9NUN5 540 aa9.71□□□□□ -0.86
LSAMP-205ENST00000490035 STK32BQ9NY57 414 aa9.71□□□□□ -0.86
LSAMP-205ENST00000490035 MORC3Q14149 939 aa9.71□□□□□ -0.86
LSAMP-205ENST00000490035 UBE3CQ15386 1083 aa9.71□□□□□ -0.86
LSAMP-205ENST00000490035 ZNF654Q8IZM8 581 aa9.71□□□□□ -0.86
LSAMP-205ENST00000490035 TTC1Q99614 292 aa9.71□□□□□ -0.86
LSAMP-205ENST00000490035 CEBPAP49715 358 aaPredicted RBP9.7□□□□□ -0.86
LSAMP-205ENST00000490035 CTNNA1P35221 906 aaKnown RBP9.7□□□□□ -0.86
LSAMP-205ENST00000490035 RILPQ96NA2 401 aa9.7□□□□□ -0.86
LSAMP-205ENST00000490035 KCNA6P17658 529 aa9.7□□□□□ -0.86
LSAMP-205ENST00000490035 LONRF2Q1L5Z9 754 aa9.7□□□□□ -0.86
LSAMP-205ENST00000490035 C2CD5Q86YS7 1000 aa9.7□□□□□ -0.86
LSAMP-205ENST00000490035 DEPTORQ8TB45 409 aa9.7□□□□□ -0.86
LSAMP-205ENST00000490035 OR52Z1P0C646 297 aa9.7□□□□□ -0.86
LSAMP-205ENST00000490035 DEUP1Q05D60 604 aa9.7□□□□□ -0.86
LSAMP-205ENST00000490035 CARD14Q9BXL6 1004 aa9.7□□□□□ -0.86
LSAMP-205ENST00000490035 CNOT10Q9H9A5 744 aaKnown RBP9.7□□□□□ -0.86
LSAMP-205ENST00000490035 IKBKBO14920 756 aa9.7□□□□□ -0.86
LSAMP-205ENST00000490035 KRT81Q14533 505 aa9.7□□□□□ -0.86
LSAMP-205ENST00000490035 CASC4Q6P4E1 433 aa9.7□□□□□ -0.86
LSAMP-205ENST00000490035 TSPYL6Q8N831 410 aa9.7□□□□□ -0.86
LSAMP-205ENST00000490035 ACSBG1Q96GR2 724 aa9.7□□□□□ -0.86
LSAMP-205ENST00000490035 PHACTR3Q96KR7 559 aa9.7□□□□□ -0.86
LSAMP-205ENST00000490035 NEURL1BA8MQ27 555 aa9.7□□□□□ -0.86
LSAMP-205ENST00000490035 TIMM10P62072 90 aa9.7□□□□□ -0.86
LSAMP-205ENST00000490035 DBN1Q16643 649 aa9.7□□□□□ -0.86
LSAMP-205ENST00000490035 PPP4R3CPQ6ZMV5 832 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms