RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 HK2P52789 917 aa8.36□□□□□ -1.07
CCDC39-206ENST00000489868 MRM1Q6IN84 353 aaKnown RBP8.36□□□□□ -1.07
CCDC39-206ENST00000489868 FIBCD1Q8N539 461 aa8.36□□□□□ -1.07
CCDC39-206ENST00000489868 CELF2-AS1Q8N7Q2 184 aa8.36□□□□□ -1.07
CCDC39-206ENST00000489868 ADCY4Q8NFM4 1077 aa8.36□□□□□ -1.07
CCDC39-206ENST00000489868 APEX2Q9UBZ4 518 aa8.36□□□□□ -1.07
CCDC39-206ENST00000489868 FHOD1Q9Y613 1164 aa8.36□□□□□ -1.07
CCDC39-206ENST00000489868 KLF4O43474 513 aa8.35□□□□□ -1.07
CCDC39-206ENST00000489868 CEBPAP49715 358 aaPredicted RBP8.35□□□□□ -1.07
CCDC39-206ENST00000489868 PCBP3P57721 371 aaKnown RBP8.35□□□□□ -1.07
CCDC39-206ENST00000489868 NOL9Q5SY16 702 aaKnown RBP8.35□□□□□ -1.07
CCDC39-206ENST00000489868 HEATR6Q6AI08 1181 aaKnown RBP8.35□□□□□ -1.07
CCDC39-206ENST00000489868 ANKS3Q6ZW76 656 aa8.35□□□□□ -1.07
CCDC39-206ENST00000489868 LINC01599Q8WXQ3 324 aa8.35□□□□□ -1.07
CCDC39-206ENST00000489868 DSCC1Q9BVC3 393 aa8.35□□□□□ -1.07
CCDC39-206ENST00000489868 NOL6Q9H6R4 1146 aaKnown RBP8.35□□□□□ -1.07
CCDC39-206ENST00000489868 CARMIL2Q6F5E8 1435 aa8.35□□□□□ -1.07
CCDC39-206ENST00000489868 ZNF205O95201 554 aa8.34□□□□□ -1.07
CCDC39-206ENST00000489868 EFEMP2O95967 443 aa8.34□□□□□ -1.07
CCDC39-206ENST00000489868 ITGA4P13612 1032 aa8.34□□□□□ -1.07
CCDC39-206ENST00000489868 VAV1P15498 845 aa8.34□□□□□ -1.07
CCDC39-206ENST00000489868 RPL10P27635 214 aaKnown RBP8.34□□□□□ -1.07
CCDC39-206ENST00000489868 BMP8BP34820 402 aa8.34□□□□□ -1.07
CCDC39-206ENST00000489868 TIGD5Q53EQ6 642 aa8.34□□□□□ -1.07
CCDC39-206ENST00000489868 RTP2Q5QGT7 225 aa8.34□□□□□ -1.07
CCDC39-206ENST00000489868 FAM178BQ8IXR5 827 aa8.34□□□□□ -1.07
CCDC39-206ENST00000489868 LGR4Q9BXB1 951 aa8.34□□□□□ -1.07
CCDC39-206ENST00000489868 SLC12A9Q9BXP2 914 aa8.34□□□□□ -1.07
CCDC39-206ENST00000489868 TANGO6Q9C0B7 1094 aa8.34□□□□□ -1.07
CCDC39-206ENST00000489868 WHRNQ9P202 907 aa8.34□□□□□ -1.07
CCDC39-206ENST00000489868 GSNP06396 782 aa8.33□□□□□ -1.08
CCDC39-206ENST00000489868 TRHRP34981 398 aaPredicted RBP8.33□□□□□ -1.08
CCDC39-206ENST00000489868 PPP2R5DQ14738 602 aa8.33□□□□□ -1.08
CCDC39-206ENST00000489868 TCEAL1Q15170 157 aa8.33□□□□□ -1.08
CCDC39-206ENST00000489868 WAPLQ7Z5K2 1190 aa8.33□□□□□ -1.08
CCDC39-206ENST00000489868 ZDHHC15Q96MV8 337 aa8.33□□□□□ -1.08
CCDC39-206ENST00000489868 MCMBPQ9BTE3 642 aa8.33□□□□□ -1.08
CCDC39-206ENST00000489868 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.33□□□□□ -1.08
CCDC39-206ENST00000489868 NOTOA8MTQ0 251 aa8.32□□□□□ -1.08
CCDC39-206ENST00000489868 GJB6O95452 261 aa8.32□□□□□ -1.08
CCDC39-206ENST00000489868 HPXP02790 462 aa8.32□□□□□ -1.08
CCDC39-206ENST00000489868 C19orf44Q9H6X5 657 aa8.32□□□□□ -1.08
CCDC39-206ENST00000489868 ST7Q9NRC1 585 aa8.32□□□□□ -1.08
CCDC39-206ENST00000489868 CGGBP1Q9UFW8 167 aaPredicted RBP8.32□□□□□ -1.08
CCDC39-206ENST00000489868 A0A087WZG4 1122 aa8.31□□□□□ -1.08
CCDC39-206ENST00000489868 ANKRD34BA5PLL1 514 aa8.31□□□□□ -1.08
CCDC39-206ENST00000489868 JUNBP17275 347 aaPredicted RBP8.31□□□□□ -1.08
CCDC39-206ENST00000489868 NCAPHQ15003 741 aa8.31□□□□□ -1.08
CCDC39-206ENST00000489868 ADAT2Q7Z6V5 191 aaKnown RBP8.31□□□□□ -1.08
CCDC39-206ENST00000489868 AP5S1Q9NUS5 200 aa8.31□□□□□ -1.08
CCDC39-206ENST00000489868 SSU72P8A0A1W2PR75 194 aa8.3□□□□□ -1.08
CCDC39-206ENST00000489868 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.3□□□□□ -1.08
CCDC39-206ENST00000489868 USP2O75604 605 aaPredicted RBP8.3□□□□□ -1.08
CCDC39-206ENST00000489868 DDAH1O94760 285 aa8.3□□□□□ -1.08
CCDC39-206ENST00000489868 IFNGR1P15260 489 aa8.3□□□□□ -1.08
CCDC39-206ENST00000489868 FXNQ16595 210 aa8.3□□□□□ -1.08
CCDC39-206ENST00000489868 ARHGEF39Q8N4T4 335 aa8.3□□□□□ -1.08
CCDC39-206ENST00000489868 PDZD8Q8NEN9 1154 aa8.3□□□□□ -1.08
CCDC39-206ENST00000489868 DHX38Q92620 1227 aaKnown RBP8.3□□□□□ -1.08
CCDC39-206ENST00000489868 MAP6Q96JE9 813 aa8.3□□□□□ -1.08
CCDC39-206ENST00000489868 HHIPL1Q96JK4 782 aa8.3□□□□□ -1.08
CCDC39-206ENST00000489868 FCRL3Q96P31 734 aaPredicted RBP8.3□□□□□ -1.08
CCDC39-206ENST00000489868 GBP3Q9H0R5 595 aa8.3□□□□□ -1.08
CCDC39-206ENST00000489868 ERVK13-1Q9NX77 482 aa8.3□□□□□ -1.08
CCDC39-206ENST00000489868 VAMP4O75379 141 aa8.29□□□□□ -1.08
CCDC39-206ENST00000489868 DDR2Q16832 855 aa8.29□□□□□ -1.08
CCDC39-206ENST00000489868 TMEM52Q8NDY8 209 aa8.29□□□□□ -1.08
CCDC39-206ENST00000489868 FAM168AQ92567 244 aa8.29□□□□□ -1.08
CCDC39-206ENST00000489868 CCDC120Q96HB5 630 aa8.29□□□□□ -1.08
CCDC39-206ENST00000489868 RCC1LQ96I51 464 aaKnown RBP8.29□□□□□ -1.08
CCDC39-206ENST00000489868 CDADC1Q9BWV3 514 aa8.29□□□□□ -1.08
CCDC39-206ENST00000489868 ZMYM5Q9UJ78 669 aa8.29□□□□□ -1.08
CCDC39-206ENST00000489868 DIS3Q9Y2L1 958 aaKnown RBP8.29□□□□□ -1.08
CCDC39-206ENST00000489868 SF3B6Q9Y3B4 125 aaKnown RBP8.29□□□□□ -1.08
CCDC39-206ENST00000489868 ZNF503-AS2A6NEH8 195 aa8.28□□□□□ -1.08
CCDC39-206ENST00000489868 BIN1O00499 593 aa8.28□□□□□ -1.08
CCDC39-206ENST00000489868 TBX1O43435 398 aa8.28□□□□□ -1.08
CCDC39-206ENST00000489868 SUSD5O60279 629 aa8.28□□□□□ -1.08
CCDC39-206ENST00000489868 PPM1BO75688 479 aa8.28□□□□□ -1.08
CCDC39-206ENST00000489868 GSTM1P09488 218 aa8.28□□□□□ -1.08
CCDC39-206ENST00000489868 ATP2B1P20020 1258 aa8.28□□□□□ -1.08
CCDC39-206ENST00000489868 AFMP43652 599 aa8.28□□□□□ -1.08
CCDC39-206ENST00000489868 RAB33AQ14088 237 aa8.28□□□□□ -1.08
CCDC39-206ENST00000489868 CWF19L1Q69YN2 538 aaKnown RBP8.28□□□□□ -1.08
CCDC39-206ENST00000489868 ZSWIM9Q86XI8 627 aa8.28□□□□□ -1.08
CCDC39-206ENST00000489868 KIRREL1Q96J84 757 aa8.28□□□□□ -1.08
CCDC39-206ENST00000489868 SUGT1Q9Y2Z0 365 aa8.28□□□□□ -1.08
CCDC39-206ENST00000489868 PSPNO60542 156 aa8.27□□□□□ -1.09
CCDC39-206ENST00000489868 STK10O94804 968 aaKnown RBP8.27□□□□□ -1.09
CCDC39-206ENST00000489868 CD3EP07766 207 aa8.27□□□□□ -1.09
CCDC39-206ENST00000489868 GTF2F1P35269 517 aaKnown RBP eCLIP8.27□□□□□ -1.09
CCDC39-206ENST00000489868 GALK1P51570 392 aa8.27□□□□□ -1.09
CCDC39-206ENST00000489868 DUSP4Q13115 394 aa8.27□□□□□ -1.09
CCDC39-206ENST00000489868 MYLIPQ8WY64 445 aa8.27□□□□□ -1.09
CCDC39-206ENST00000489868 SHISA4Q96DD7 197 aa8.27□□□□□ -1.09
CCDC39-206ENST00000489868 FCRL2Q96LA5 508 aaPredicted RBP8.27□□□□□ -1.09
CCDC39-206ENST00000489868 APBA2Q99767 749 aa8.27□□□□□ -1.09
CCDC39-206ENST00000489868 EMC9Q9Y3B6 208 aa8.27□□□□□ -1.09
CCDC39-206ENST00000489868 FITM1A5D6W6 292 aa8.26□□□□□ -1.09
CCDC39-206ENST00000489868 FADS2P1A8MWK0 482 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms