RNA–Protein interactions for RNA: ENST00000489081.5

CMSS1-205, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2 BASIC

Gene CMSS1, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-205ENST00000489081 LDLRAD1Q5T700 205 aa13.29□□□□□ -0.28
CMSS1-205ENST00000489081 CLMNQ96JQ2 1002 aa13.29□□□□□ -0.28
CMSS1-205ENST00000489081 PIGSQ96S52 555 aa13.29□□□□□ -0.28
CMSS1-205ENST00000489081 JMJD4Q9H9V9 463 aa13.29□□□□□ -0.28
CMSS1-205ENST00000489081 VAT1LQ9HCJ6 419 aa13.29□□□□□ -0.28
CMSS1-205ENST00000489081 EMILIN3Q9NT22 766 aa13.29□□□□□ -0.28
CMSS1-205ENST00000489081 VPS54Q9P1Q0 977 aa13.29□□□□□ -0.28
CMSS1-205ENST00000489081 AFG3L2Q9Y4W6 797 aa13.29□□□□□ -0.28
CMSS1-205ENST00000489081 TRIM75PA6NK02 468 aa13.28□□□□□ -0.28
CMSS1-205ENST00000489081 C19orf81C9J6K1 198 aa13.28□□□□□ -0.28
CMSS1-205ENST00000489081 TMEM232C9JQI7 657 aa13.28□□□□□ -0.28
CMSS1-205ENST00000489081 WDR46O15213 610 aaKnown RBP13.28□□□□□ -0.28
CMSS1-205ENST00000489081 XBP1P17861 261 aa13.28□□□□□ -0.28
CMSS1-205ENST00000489081 SYDE2Q5VT97 1194 aa13.28□□□□□ -0.28
CMSS1-205ENST00000489081 CHADLQ6NUI6 762 aa13.28□□□□□ -0.28
CMSS1-205ENST00000489081 CHRDL2Q6WN34 429 aa13.28□□□□□ -0.28
CMSS1-205ENST00000489081 CLEC17AQ6ZS10 378 aa13.28□□□□□ -0.28
CMSS1-205ENST00000489081 FERMT3Q86UX7 667 aa13.28□□□□□ -0.28
CMSS1-205ENST00000489081 HOMER1Q86YM7 354 aa13.28□□□□□ -0.28
CMSS1-205ENST00000489081 C12orf42Q96LP6 360 aa13.28□□□□□ -0.28
CMSS1-205ENST00000489081 ZNF408Q9H9D4 720 aa13.28□□□□□ -0.28
CMSS1-205ENST00000489081 SEC63Q9UGP8 760 aaKnown RBP13.28□□□□□ -0.28
CMSS1-205ENST00000489081 PNMA6FA0A0J9YX94 578 aa13.27□□□□□ -0.29
CMSS1-205ENST00000489081 SPDYE5A6NIY4 337 aa13.27□□□□□ -0.29
CMSS1-205ENST00000489081 UNCXA6NJT0 531 aa13.27□□□□□ -0.29
CMSS1-205ENST00000489081 ITGBL1O95965 494 aaPredicted RBP13.27□□□□□ -0.29
CMSS1-205ENST00000489081 MMP1P03956 469 aa13.27□□□□□ -0.29
CMSS1-205ENST00000489081 STAT2P52630 851 aa13.27□□□□□ -0.29
CMSS1-205ENST00000489081 FKBP1BP68106 108 aa13.27□□□□□ -0.29
CMSS1-205ENST00000489081 KIF23Q02241 960 aaPredicted RBP13.27□□□□□ -0.29
CMSS1-205ENST00000489081 PPATQ06203 517 aa13.27□□□□□ -0.29
CMSS1-205ENST00000489081 IKQ13123 557 aaPredicted RBP13.27□□□□□ -0.29
CMSS1-205ENST00000489081 DGKZQ13574 1117 aa13.27□□□□□ -0.29
CMSS1-205ENST00000489081 SH3D19Q5HYK7 790 aa13.27□□□□□ -0.29
CMSS1-205ENST00000489081 WWC2Q6AWC2 1192 aa13.27□□□□□ -0.29
CMSS1-205ENST00000489081 FAM160B2Q86V87 743 aa13.27□□□□□ -0.29
CMSS1-205ENST00000489081 ERO1BQ86YB8 467 aa13.27□□□□□ -0.29
CMSS1-205ENST00000489081 RBM46Q8TBY0 533 aaKnown RBP13.27□□□□□ -0.29
CMSS1-205ENST00000489081 CHURC1Q8WUH1 139 aa13.27□□□□□ -0.29
CMSS1-205ENST00000489081 GPKOWQ92917 476 aaPredicted RBP eCLIP13.27□□□□□ -0.29
CMSS1-205ENST00000489081 PHF20Q9BVI0 1012 aa13.27□□□□□ -0.29
CMSS1-205ENST00000489081 ZSCAN16Q9H4T2 348 aaPredicted RBP13.27□□□□□ -0.29
CMSS1-205ENST00000489081 ELP3Q9H9T3 547 aa13.27□□□□□ -0.29
CMSS1-205ENST00000489081 SH3GLB2Q9NR46 395 aa13.27□□□□□ -0.29
CMSS1-205ENST00000489081 BARHL2Q9NY43 387 aa13.27□□□□□ -0.29
CMSS1-205ENST00000489081 FEM1BQ9UK73 627 aa13.27□□□□□ -0.29
CMSS1-205ENST00000489081 KCNJ14Q9UNX9 436 aa13.27□□□□□ -0.29
CMSS1-205ENST00000489081 STXBP3O00186 592 aa13.26□□□□□ -0.29
CMSS1-205ENST00000489081 ZBTB5O15062 677 aa13.26□□□□□ -0.29
CMSS1-205ENST00000489081 CELF2O95319 508 aaKnown RBP13.26□□□□□ -0.29
CMSS1-205ENST00000489081 BAG4O95429 457 aaKnown RBP13.26□□□□□ -0.29
CMSS1-205ENST00000489081 VCAM1P19320 739 aa13.26□□□□□ -0.29
CMSS1-205ENST00000489081 MCTP1Q6DN14 999 aa13.26□□□□□ -0.29
CMSS1-205ENST00000489081 TYW1BQ6NUM6 668 aa13.26□□□□□ -0.29
CMSS1-205ENST00000489081 HEATR3Q7Z4Q2 680 aa13.26□□□□□ -0.29
CMSS1-205ENST00000489081 FAM177A1Q8N128 213 aaPredicted RBP13.26□□□□□ -0.29
CMSS1-205ENST00000489081 GPBP1L1Q9HC44 474 aaPredicted RBP13.26□□□□□ -0.29
CMSS1-205ENST00000489081 GBA2Q9HCG7 927 aaPredicted RBP13.26□□□□□ -0.29
CMSS1-205ENST00000489081 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.26□□□□□ -0.29
CMSS1-205ENST00000489081 PRR12Q9ULL5 1215 aa13.26□□□□□ -0.29
CMSS1-205ENST00000489081 ATP6V1DQ9Y5K8 247 aa13.26□□□□□ -0.29
CMSS1-205ENST00000489081 OTOFQ9HC10 1997 aa13.25□□□□□ -0.29
CMSS1-205ENST00000489081 KIF28PB7ZC32 967 aa13.25□□□□□ -0.29
CMSS1-205ENST00000489081 hCG_1984214I3L0E3 225 aa13.25□□□□□ -0.29
CMSS1-205ENST00000489081 PPP1R11O60927 126 aaPredicted RBP13.25□□□□□ -0.29
CMSS1-205ENST00000489081 HMGCS2P54868 508 aa13.25□□□□□ -0.29
CMSS1-205ENST00000489081 NLRP5P59047 1200 aa13.25□□□□□ -0.29
CMSS1-205ENST00000489081 PPIL2Q13356 520 aa13.25□□□□□ -0.29
CMSS1-205ENST00000489081 SAFBQ15424 915 aaKnown RBP eCLIP13.25□□□□□ -0.29
CMSS1-205ENST00000489081 NPY5RQ15761 445 aa13.25□□□□□ -0.29
CMSS1-205ENST00000489081 CDC37Q16543 378 aaPredicted RBP13.25□□□□□ -0.29
CMSS1-205ENST00000489081 QRICH1Q2TAL8 776 aa13.25□□□□□ -0.29
CMSS1-205ENST00000489081 DIS3L2Q8IYB7 885 aaKnown RBP13.25□□□□□ -0.29
CMSS1-205ENST00000489081 ZNF713Q8N859 430 aaPredicted RBP13.25□□□□□ -0.29
CMSS1-205ENST00000489081 C2orf69Q8N8R5 385 aa13.25□□□□□ -0.29
CMSS1-205ENST00000489081 OTUD5Q96G74 571 aa13.25□□□□□ -0.29
CMSS1-205ENST00000489081 CHAMP1Q96JM3 812 aa13.25□□□□□ -0.29
CMSS1-205ENST00000489081 GBP4Q96PP9 640 aa13.25□□□□□ -0.29
CMSS1-205ENST00000489081 RPAP3Q9H6T3 665 aaPredicted RBP13.25□□□□□ -0.29
CMSS1-205ENST00000489081 FBXO28Q9NVF7 368 aa13.25□□□□□ -0.29
CMSS1-205ENST00000489081 TMOD4Q9NZQ9 345 aa13.25□□□□□ -0.29
CMSS1-205ENST00000489081 CXCL11O14625 94 aa13.24□□□□□ -0.29
CMSS1-205ENST00000489081 KIF3CO14782 793 aa13.24□□□□□ -0.29
CMSS1-205ENST00000489081 IRF6O14896 467 aa13.24□□□□□ -0.29
CMSS1-205ENST00000489081 U2AF2P26368 475 aaKnown RBP eCLIP13.24□□□□□ -0.29
CMSS1-205ENST00000489081 CALML3P27482 149 aa13.24□□□□□ -0.29
CMSS1-205ENST00000489081 SNAP25P60880 206 aa13.24□□□□□ -0.29
CMSS1-205ENST00000489081 FOXD4L6Q3SYB3 417 aaPredicted RBP13.24□□□□□ -0.29
CMSS1-205ENST00000489081 CST9Q5W186 159 aa13.24□□□□□ -0.29
CMSS1-205ENST00000489081 FAM173BQ6P4H8 233 aa13.24□□□□□ -0.29
CMSS1-205ENST00000489081 FOXD4L3Q6VB84 417 aaPredicted RBP13.24□□□□□ -0.29
CMSS1-205ENST00000489081 BRAPQ7Z569 592 aa13.24□□□□□ -0.29
CMSS1-205ENST00000489081 CCDC148Q8NFR7 591 aa13.24□□□□□ -0.29
CMSS1-205ENST00000489081 CCDC12Q8WUD4 166 aaPredicted RBP13.24□□□□□ -0.29
CMSS1-205ENST00000489081 KIFC2Q96AC6 838 aa13.24□□□□□ -0.29
CMSS1-205ENST00000489081 OPTNQ96CV9 577 aa13.24□□□□□ -0.29
CMSS1-205ENST00000489081 SLC10A4Q96EP9 437 aa13.24□□□□□ -0.29
CMSS1-205ENST00000489081 RANBP17Q9H2T7 1088 aaKnown RBP13.24□□□□□ -0.29
CMSS1-205ENST00000489081 FOXP1Q9H334 677 aaPredicted RBP13.24□□□□□ -0.29
CMSS1-205ENST00000489081 KCNH4Q9UQ05 1017 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms