RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 BAG4O95429 457 aaKnown RBP7.85□□□□□ -1.15
PDCD4-209ENST00000489049 BRD1O95696 1058 aa7.85□□□□□ -1.15
PDCD4-209ENST00000489049 MBD3O95983 291 aa7.85□□□□□ -1.15
PDCD4-209ENST00000489049 H2AFB1P0C5Y9 115 aa7.85□□□□□ -1.15
PDCD4-209ENST00000489049 H2AFB2P0C5Z0 115 aa7.85□□□□□ -1.15
PDCD4-209ENST00000489049 CASTP20810 708 aaKnown RBP7.85□□□□□ -1.15
PDCD4-209ENST00000489049 INPP5BP32019 993 aa7.85□□□□□ -1.15
PDCD4-209ENST00000489049 IDH3AP50213 366 aa7.85□□□□□ -1.15
PDCD4-209ENST00000489049 PIP4K2BP78356 416 aa7.85□□□□□ -1.15
PDCD4-209ENST00000489049 PUM3Q15397 648 aaKnown RBP7.85□□□□□ -1.15
PDCD4-209ENST00000489049 HLFQ16534 295 aa7.85□□□□□ -1.15
PDCD4-209ENST00000489049 KLHL40Q2TBA0 621 aa7.85□□□□□ -1.15
PDCD4-209ENST00000489049 METTL24Q5JXM2 366 aa7.85□□□□□ -1.15
PDCD4-209ENST00000489049 SLC10A5Q5PT55 438 aa7.85□□□□□ -1.15
PDCD4-209ENST00000489049 PRPF40BQ6NWY9 871 aaKnown RBP7.85□□□□□ -1.15
PDCD4-209ENST00000489049 ANKMY2Q8IV38 441 aa7.85□□□□□ -1.15
PDCD4-209ENST00000489049 DMRTC2Q8IXT2 367 aaPredicted RBP7.85□□□□□ -1.15
PDCD4-209ENST00000489049 FBXL16Q8N461 479 aa7.85□□□□□ -1.15
PDCD4-209ENST00000489049 RGS22Q8NE09 1264 aa7.85□□□□□ -1.15
PDCD4-209ENST00000489049 LPIN2Q92539 896 aa7.85□□□□□ -1.15
PDCD4-209ENST00000489049 JAKMIP1Q96N16 626 aaKnown RBP7.85□□□□□ -1.15
PDCD4-209ENST00000489049 NYXQ9GZU5 481 aa7.85□□□□□ -1.15
PDCD4-209ENST00000489049 PALD1Q9ULE6 856 aa7.85□□□□□ -1.15
PDCD4-209ENST00000489049 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.85□□□□□ -1.15
PDCD4-209ENST00000489049 BCL9LQ86UU0 1499 aa7.85□□□□□ -1.15
PDCD4-209ENST00000489049 WDR19Q8NEZ3 1342 aa7.84□□□□□ -1.15
PDCD4-209ENST00000489049 A0A0D9SFI3 127 aa7.84□□□□□ -1.15
PDCD4-209ENST00000489049 MAP3K6O95382 1288 aa7.84□□□□□ -1.15
PDCD4-209ENST00000489049 SLC5A1P13866 664 aa7.84□□□□□ -1.15
PDCD4-209ENST00000489049 RPS6KB1P23443 525 aa7.84□□□□□ -1.15
PDCD4-209ENST00000489049 PTH1RQ03431 593 aa7.84□□□□□ -1.15
PDCD4-209ENST00000489049 LRRC24Q50LG9 513 aa7.84□□□□□ -1.15
PDCD4-209ENST00000489049 FAM35AQ86V20 835 aa7.84□□□□□ -1.15
PDCD4-209ENST00000489049 JARID2Q92833 1246 aaPredicted RBP7.84□□□□□ -1.15
PDCD4-209ENST00000489049 FAM227BQ96M60 508 aa7.84□□□□□ -1.15
PDCD4-209ENST00000489049 DNAJC2Q99543 621 aaKnown RBP7.84□□□□□ -1.15
PDCD4-209ENST00000489049 KLK14Q9P0G3 267 aa7.84□□□□□ -1.15
PDCD4-209ENST00000489049 SMC3Q9UQE7 1217 aa7.84□□□□□ -1.15
PDCD4-209ENST00000489049 DOT1LQ8TEK3 1739 aa7.83□□□□□ -1.16
PDCD4-209ENST00000489049 GOLIM4O00461 696 aa7.83□□□□□ -1.16
PDCD4-209ENST00000489049 RPS6KA4O75676 772 aa7.83□□□□□ -1.16
PDCD4-209ENST00000489049 NCLP19338 710 aaKnown RBP7.83□□□□□ -1.16
PDCD4-209ENST00000489049 GPTP24298 496 aa7.83□□□□□ -1.16
PDCD4-209ENST00000489049 IGHMBP2P38935 993 aaKnown RBP7.83□□□□□ -1.16
PDCD4-209ENST00000489049 AK2P54819 239 aa7.83□□□□□ -1.16
PDCD4-209ENST00000489049 TIMM10P62072 90 aa7.83□□□□□ -1.16
PDCD4-209ENST00000489049 UBE3CQ15386 1083 aa7.83□□□□□ -1.16
PDCD4-209ENST00000489049 SF3B3Q15393 1217 aaKnown RBP7.83□□□□□ -1.16
PDCD4-209ENST00000489049 PCSK7Q16549 785 aa7.83□□□□□ -1.16
PDCD4-209ENST00000489049 APPBP2Q92624 585 aa7.83□□□□□ -1.16
PDCD4-209ENST00000489049 SYAP1Q96A49 352 aaPredicted RBP7.83□□□□□ -1.16
PDCD4-209ENST00000489049 PSMG3-AS1Q96PY0 264 aa7.83□□□□□ -1.16
PDCD4-209ENST00000489049 NEK1Q96PY6 1258 aa7.83□□□□□ -1.16
PDCD4-209ENST00000489049 MPHOSPH8Q99549 860 aa7.83□□□□□ -1.16
PDCD4-209ENST00000489049 LPIN3Q9BQK8 851 aa7.83□□□□□ -1.16
PDCD4-209ENST00000489049 LLPHQ9BRT6 129 aaKnown RBP7.83□□□□□ -1.16
PDCD4-209ENST00000489049 UPF3BQ9BZI7 483 aaKnown RBP7.83□□□□□ -1.16
PDCD4-209ENST00000489049 GREM2Q9H772 168 aa7.83□□□□□ -1.16
PDCD4-209ENST00000489049 QTRT2Q9H974 415 aaKnown RBP7.83□□□□□ -1.16
PDCD4-209ENST00000489049 GNL3LQ9NVN8 582 aaKnown RBP7.83□□□□□ -1.16
PDCD4-209ENST00000489049 FRRS1LQ9P0K9 344 aa7.83□□□□□ -1.16
PDCD4-209ENST00000489049 ZFATQ9P243 1243 aa7.83□□□□□ -1.16
PDCD4-209ENST00000489049 USP21Q9UK80 565 aa7.83□□□□□ -1.16
PDCD4-209ENST00000489049 CARMIL3Q8ND23 1372 aa7.83□□□□□ -1.16
PDCD4-209ENST00000489049 NUP98P52948 1817 aa7.82□□□□□ -1.16
PDCD4-209ENST00000489049 GOLGA6L3A6NEY3 463 aa7.82□□□□□ -1.16
PDCD4-209ENST00000489049 CPB1P15086 417 aa7.82□□□□□ -1.16
PDCD4-209ENST00000489049 FGFR2P21802 821 aa7.82□□□□□ -1.16
PDCD4-209ENST00000489049 ARID4AP29374 1257 aaPredicted RBP7.82□□□□□ -1.16
PDCD4-209ENST00000489049 NT5C2P49902 561 aa7.82□□□□□ -1.16
PDCD4-209ENST00000489049 MRE11P49959 708 aa7.82□□□□□ -1.16
PDCD4-209ENST00000489049 ARSDP51689 593 aa7.82□□□□□ -1.16
PDCD4-209ENST00000489049 ITPK1Q13572 414 aa7.82□□□□□ -1.16
PDCD4-209ENST00000489049 DGKZQ13574 1117 aa7.82□□□□□ -1.16
PDCD4-209ENST00000489049 GRIK5Q16478 980 aa7.82□□□□□ -1.16
PDCD4-209ENST00000489049 ARTNQ5T4W7 220 aa7.82□□□□□ -1.16
PDCD4-209ENST00000489049 MSL1Q68DK7 614 aa7.82□□□□□ -1.16
PDCD4-209ENST00000489049 DHX32Q7L7V1 743 aaKnown RBP7.82□□□□□ -1.16
PDCD4-209ENST00000489049 VGLL2Q8N8G2 317 aa7.82□□□□□ -1.16
PDCD4-209ENST00000489049 C8orf37Q96NL8 207 aa7.82□□□□□ -1.16
PDCD4-209ENST00000489049 IL25Q9H293 177 aa7.82□□□□□ -1.16
PDCD4-209ENST00000489049 C11orf16Q9NQ32 467 aa7.82□□□□□ -1.16
PDCD4-209ENST00000489049 NARFQ9UHQ1 456 aa7.82□□□□□ -1.16
PDCD4-209ENST00000489049 NIP7Q9Y221 180 aaKnown RBP eCLIP7.82□□□□□ -1.16
PDCD4-209ENST00000489049 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.82□□□□□ -1.16
PDCD4-209ENST00000489049 MYH3P11055 1940 aa7.82□□□□□ -1.16
PDCD4-209ENST00000489049 ZMYM6O95789 1325 aa7.81□□□□□ -1.16
PDCD4-209ENST00000489049 UBN2Q6ZU65 1347 aa7.81□□□□□ -1.16
PDCD4-209ENST00000489049 FSD2A1L4K1 749 aa7.81□□□□□ -1.16
PDCD4-209ENST00000489049 ZBTB42B2RXF5 422 aa7.81□□□□□ -1.16
PDCD4-209ENST00000489049 DHX16O60231 1041 aaKnown RBP7.81□□□□□ -1.16
PDCD4-209ENST00000489049 NTSR2O95665 410 aa7.81□□□□□ -1.16
PDCD4-209ENST00000489049 GNAT2P19087 354 aa7.81□□□□□ -1.16
PDCD4-209ENST00000489049 WEE1P30291 646 aa7.81□□□□□ -1.16
PDCD4-209ENST00000489049 MAP3K12Q12852 859 aa7.81□□□□□ -1.16
PDCD4-209ENST00000489049 UBE4AQ14139 1066 aa7.81□□□□□ -1.16
PDCD4-209ENST00000489049 ALX1Q15699 326 aa7.81□□□□□ -1.16
PDCD4-209ENST00000489049 IMMTQ16891 758 aaKnown RBP7.81□□□□□ -1.16
PDCD4-209ENST00000489049 SUSD4Q5VX71 490 aa7.81□□□□□ -1.16
PDCD4-209ENST00000489049 DDX46Q7L014 1031 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms