RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 SNX14Q9Y5W7 946 aa21.87■■□□□ 1.09
PTCD3-217ENST00000488801 SH2B2O14492 632 aaPredicted RBP21.86■■□□□ 1.09
PTCD3-217ENST00000488801 IFIT3O14879 490 aaKnown RBP21.86■■□□□ 1.09
PTCD3-217ENST00000488801 PRC1O43663 620 aa21.86■■□□□ 1.09
PTCD3-217ENST00000488801 FDX1P10109 184 aa21.86■■□□□ 1.09
PTCD3-217ENST00000488801 ZKSCAN1P17029 563 aaPredicted RBP21.86■■□□□ 1.09
PTCD3-217ENST00000488801 OAZ1P54368 228 aa21.86■■□□□ 1.09
PTCD3-217ENST00000488801 SART3Q15020 963 aaKnown RBP21.86■■□□□ 1.09
PTCD3-217ENST00000488801 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.86■■□□□ 1.09
PTCD3-217ENST00000488801 GPR142Q7Z601 462 aa21.86■■□□□ 1.09
PTCD3-217ENST00000488801 RIOX2Q8IUF8 465 aa21.86■■□□□ 1.09
PTCD3-217ENST00000488801 CHURC1Q8WUH1 139 aa21.86■■□□□ 1.09
PTCD3-217ENST00000488801 USP6NLQ92738 828 aa21.86■■□□□ 1.09
PTCD3-217ENST00000488801 TMEM87BQ96K49 555 aa21.86■■□□□ 1.09
PTCD3-217ENST00000488801 GABRQQ9UN88 632 aa21.86■■□□□ 1.09
PTCD3-217ENST00000488801 PTCH2Q9Y6C5 1203 aa21.86■■□□□ 1.09
PTCD3-217ENST00000488801 ZNF536O15090 1300 aa21.85■■□□□ 1.09
PTCD3-217ENST00000488801 EXOSC10Q01780 885 aaKnown RBP21.85■■□□□ 1.09
PTCD3-217ENST00000488801 IRF5Q13568 498 aa21.85■■□□□ 1.09
PTCD3-217ENST00000488801 CCDC96Q2M329 555 aa21.85■■□□□ 1.09
PTCD3-217ENST00000488801 C8orf34Q49A92 452 aa21.85■■□□□ 1.09
PTCD3-217ENST00000488801 MORN1Q5T089 497 aa21.85■■□□□ 1.09
PTCD3-217ENST00000488801 GPATCH4Q5T3I0 446 aaKnown RBP21.85■■□□□ 1.09
PTCD3-217ENST00000488801 TTBK2Q6IQ55 1244 aa21.85■■□□□ 1.09
PTCD3-217ENST00000488801 KIFC2Q96AC6 838 aa21.85■■□□□ 1.09
PTCD3-217ENST00000488801 NEK1Q96PY6 1258 aa21.85■■□□□ 1.09
PTCD3-217ENST00000488801 PRR12Q9ULL5 1215 aa21.85■■□□□ 1.09
PTCD3-217ENST00000488801 FRMPD2Q68DX3 1309 aaPredicted RBP21.84■■□□□ 1.09
PTCD3-217ENST00000488801 ECM2O94769 699 aaPredicted RBP21.84■■□□□ 1.09
PTCD3-217ENST00000488801 HOXD10P28358 340 aa21.84■■□□□ 1.09
PTCD3-217ENST00000488801 LIFRP42702 1097 aa21.84■■□□□ 1.09
PTCD3-217ENST00000488801 TROAPQ12815 778 aa21.84■■□□□ 1.09
PTCD3-217ENST00000488801 GRB14Q14449 540 aa21.84■■□□□ 1.09
PTCD3-217ENST00000488801 WTAPQ15007 396 aa21.84■■□□□ 1.09
PTCD3-217ENST00000488801 ASPRV1Q53RT3 343 aa21.84■■□□□ 1.09
PTCD3-217ENST00000488801 TMEM67Q5HYA8 995 aa21.84■■□□□ 1.09
PTCD3-217ENST00000488801 COA7Q96BR5 231 aa21.84■■□□□ 1.09
PTCD3-217ENST00000488801 TEX13BQ9BXU2 312 aa21.84■■□□□ 1.09
PTCD3-217ENST00000488801 RANBP17Q9H2T7 1088 aaKnown RBP21.84■■□□□ 1.09
PTCD3-217ENST00000488801 GPHNQ9NQX3 736 aaPredicted RBP21.84■■□□□ 1.09
PTCD3-217ENST00000488801 HPS5Q9UPZ3 1129 aa21.84■■□□□ 1.09
PTCD3-217ENST00000488801 MTMR7Q9Y216 660 aa21.84■■□□□ 1.09
PTCD3-217ENST00000488801 ERICH2A1L162 156 aa21.83■■□□□ 1.09
PTCD3-217ENST00000488801 ERCC3P19447 782 aa21.83■■□□□ 1.09
PTCD3-217ENST00000488801 FLT3LGP49771 235 aa21.83■■□□□ 1.09
PTCD3-217ENST00000488801 PLEKHH3Q7Z736 793 aa21.83■■□□□ 1.09
PTCD3-217ENST00000488801 SGMS1Q86VZ5 419 aa21.83■■□□□ 1.09
PTCD3-217ENST00000488801 SOCS4Q8WXH5 440 aa21.83■■□□□ 1.09
PTCD3-217ENST00000488801 IL17RAQ96F46 866 aa21.83■■□□□ 1.09
PTCD3-217ENST00000488801 ABHD8Q96I13 439 aa21.83■■□□□ 1.09
PTCD3-217ENST00000488801 GTF3C3Q9Y5Q9 886 aa21.83■■□□□ 1.09
PTCD3-217ENST00000488801 BRCA2P51587 3418 aa21.83■■□□□ 1.09
PTCD3-217ENST00000488801 SLC25A27O95847 323 aa21.82■■□□□ 1.08
PTCD3-217ENST00000488801 COPB2P35606 906 aa21.82■■□□□ 1.08
PTCD3-217ENST00000488801 STAT3P40763 770 aa21.82■■□□□ 1.08
PTCD3-217ENST00000488801 GRM4Q14833 912 aa21.82■■□□□ 1.08
PTCD3-217ENST00000488801 SYDE2Q5VT97 1194 aa21.82■■□□□ 1.08
PTCD3-217ENST00000488801 SAMD1Q6SPF0 538 aaPredicted RBP21.82■■□□□ 1.08
PTCD3-217ENST00000488801 DHX32Q7L7V1 743 aaKnown RBP21.82■■□□□ 1.08
PTCD3-217ENST00000488801 ARMC5Q96C12 935 aa21.82■■□□□ 1.08
PTCD3-217ENST00000488801 CHMP4CQ96CF2 233 aa21.82■■□□□ 1.08
PTCD3-217ENST00000488801 MROH8Q9H579 483 aa21.82■■□□□ 1.08
PTCD3-217ENST00000488801 MAD2L2Q9UI95 211 aa21.82■■□□□ 1.08
PTCD3-217ENST00000488801 PALM3A6NDB9 673 aaPredicted RBP21.81■■□□□ 1.08
PTCD3-217ENST00000488801 PTPREP23469 700 aa21.81■■□□□ 1.08
PTCD3-217ENST00000488801 FBXL16Q8N461 479 aa21.81■■□□□ 1.08
PTCD3-217ENST00000488801 MAP3K14Q99558 947 aa21.81■■□□□ 1.08
PTCD3-217ENST00000488801 GPCPD1Q9NPB8 672 aa21.81■■□□□ 1.08
PTCD3-217ENST00000488801 SLC15A5A6NIM6 579 aa21.8■■□□□ 1.08
PTCD3-217ENST00000488801 ZBED4O75132 1171 aa21.8■■□□□ 1.08
PTCD3-217ENST00000488801 DDAH1O94760 285 aa21.8■■□□□ 1.08
PTCD3-217ENST00000488801 HMGB1P09429 215 aaKnown RBP21.8■■□□□ 1.08
PTCD3-217ENST00000488801 HOXC6P09630 235 aa21.8■■□□□ 1.08
PTCD3-217ENST00000488801 PARP1P09874 1014 aaKnown RBP21.8■■□□□ 1.08
PTCD3-217ENST00000488801 GOLGA8HP0CJ92 632 aa21.8■■□□□ 1.08
PTCD3-217ENST00000488801 SLC16A2P36021 539 aa21.8■■□□□ 1.08
PTCD3-217ENST00000488801 PLS1Q14651 629 aa21.8■■□□□ 1.08
PTCD3-217ENST00000488801 SNRNP48Q6IEG0 339 aaKnown RBP21.8■■□□□ 1.08
PTCD3-217ENST00000488801 ABRAQ8N0Z2 381 aa21.8■■□□□ 1.08
PTCD3-217ENST00000488801 STAG2Q8N3U4 1231 aa21.8■■□□□ 1.08
PTCD3-217ENST00000488801 PXYLP1Q8TE99 480 aa21.8■■□□□ 1.08
PTCD3-217ENST00000488801 AGXT2Q9BYV1 514 aa21.8■■□□□ 1.08
PTCD3-217ENST00000488801 RIPK3Q9Y572 518 aa21.8■■□□□ 1.08
PTCD3-217ENST00000488801 SEC24BO95487 1268 aa21.79■■□□□ 1.08
PTCD3-217ENST00000488801 IGHA2P01877 340 aa21.79■■□□□ 1.08
PTCD3-217ENST00000488801 XRCC5P13010 732 aaKnown RBP21.79■■□□□ 1.08
PTCD3-217ENST00000488801 IKQ13123 557 aaPredicted RBP21.79■■□□□ 1.08
PTCD3-217ENST00000488801 SLC35G1Q2M3R5 365 aa21.79■■□□□ 1.08
PTCD3-217ENST00000488801 ZNF654Q8IZM8 581 aa21.79■■□□□ 1.08
PTCD3-217ENST00000488801 TMTC2Q8N394 836 aa21.79■■□□□ 1.08
PTCD3-217ENST00000488801 JAKMIP1Q96N16 626 aaKnown RBP21.79■■□□□ 1.08
PTCD3-217ENST00000488801 NUDT12Q9BQG2 462 aa21.79■■□□□ 1.08
PTCD3-217ENST00000488801 LRRC2Q9BYS8 371 aa21.79■■□□□ 1.08
PTCD3-217ENST00000488801 RAVER2Q9HCJ3 691 aaKnown RBP21.79■■□□□ 1.08
PTCD3-217ENST00000488801 ISY1Q9ULR0 285 aaKnown RBP21.79■■□□□ 1.08
PTCD3-217ENST00000488801 STRNO43815 780 aa21.78■■□□□ 1.08
PTCD3-217ENST00000488801 EIF5BO60841 1220 aaKnown RBP21.78■■□□□ 1.08
PTCD3-217ENST00000488801 ICAM1P05362 532 aa21.78■■□□□ 1.08
PTCD3-217ENST00000488801 MAP2K5Q13163 448 aa21.78■■□□□ 1.08
PTCD3-217ENST00000488801 NCAPG2Q86XI2 1143 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms