RNA–Protein interactions for RNA: ENST00000488623.5

CTNS-206, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-206ENST00000488623 GJB4Q9NTQ9 266 aa17.52■□□□□ 0.4
CTNS-206ENST00000488623 ISY1Q9ULR0 285 aaKnown RBP17.52■□□□□ 0.4
CTNS-206ENST00000488623 KIF3AQ9Y496 699 aa17.52■□□□□ 0.4
CTNS-206ENST00000488623 UNCXA6NJT0 531 aa17.51■□□□□ 0.39
CTNS-206ENST00000488623 USP14P54578 494 aa17.51■□□□□ 0.39
CTNS-206ENST00000488623 PPATQ06203 517 aa17.51■□□□□ 0.39
CTNS-206ENST00000488623 ERO1BQ86YB8 467 aa17.51■□□□□ 0.39
CTNS-206ENST00000488623 C2orf69Q8N8R5 385 aa17.51■□□□□ 0.39
CTNS-206ENST00000488623 C8orf76Q96K31 380 aa17.51■□□□□ 0.39
CTNS-206ENST00000488623 PIGSQ96S52 555 aa17.51■□□□□ 0.39
CTNS-206ENST00000488623 JMJD4Q9H9V9 463 aa17.51■□□□□ 0.39
CTNS-206ENST00000488623 SPDYE5A6NIY4 337 aa17.5■□□□□ 0.39
CTNS-206ENST00000488623 PDIA4P13667 645 aaKnown RBP17.5■□□□□ 0.39
CTNS-206ENST00000488623 GUCY1B3Q02153 619 aa17.5■□□□□ 0.39
CTNS-206ENST00000488623 PFKFB3Q16875 520 aaPredicted RBP17.5■□□□□ 0.39
CTNS-206ENST00000488623 SH3D19Q5HYK7 790 aa17.5■□□□□ 0.39
CTNS-206ENST00000488623 FOXD4L5Q5VV16 416 aaPredicted RBP17.5■□□□□ 0.39
CTNS-206ENST00000488623 FBXO18Q8NFZ0 1043 aa17.5■□□□□ 0.39
CTNS-206ENST00000488623 FOXD4L4Q8WXT5 416 aaPredicted RBP17.5■□□□□ 0.39
CTNS-206ENST00000488623 LPAR1Q92633 364 aa17.5■□□□□ 0.39
CTNS-206ENST00000488623 SHISA4Q96DD7 197 aa17.5■□□□□ 0.39
CTNS-206ENST00000488623 MTMR8Q96EF0 704 aa17.5■□□□□ 0.39
CTNS-206ENST00000488623 SLC10A4Q96EP9 437 aa17.5■□□□□ 0.39
CTNS-206ENST00000488623 RRP36Q96EU6 259 aaKnown RBP17.5■□□□□ 0.39
CTNS-206ENST00000488623 C12orf42Q96LP6 360 aa17.5■□□□□ 0.39
CTNS-206ENST00000488623 RBM27Q9P2N5 1060 aaKnown RBP17.5■□□□□ 0.39
CTNS-206ENST00000488623 WDR33Q9C0J8 1336 aaKnown RBP17.49■□□□□ 0.39
CTNS-206ENST00000488623 VPS37CA5D8V6 355 aaPredicted RBP17.49■□□□□ 0.39
CTNS-206ENST00000488623 H3BQV1 296 aa17.49■□□□□ 0.39
CTNS-206ENST00000488623 WDR46O15213 610 aaKnown RBP17.49■□□□□ 0.39
CTNS-206ENST00000488623 PLA2G6O60733 806 aa17.49■□□□□ 0.39
CTNS-206ENST00000488623 ZSCAN22P10073 491 aaPredicted RBP17.49■□□□□ 0.39
CTNS-206ENST00000488623 SCG2P13521 617 aa17.49■□□□□ 0.39
CTNS-206ENST00000488623 HMGCS2P54868 508 aa17.49■□□□□ 0.39
CTNS-206ENST00000488623 COL13A1Q5TAT6 717 aaPredicted RBP17.49■□□□□ 0.39
CTNS-206ENST00000488623 SYDE2Q5VT97 1194 aa17.49■□□□□ 0.39
CTNS-206ENST00000488623 RGS22Q8NE09 1264 aa17.49■□□□□ 0.39
CTNS-206ENST00000488623 OTUD5Q96G74 571 aa17.49■□□□□ 0.39
CTNS-206ENST00000488623 THSD7BQ9C0I4 1608 aa17.48■□□□□ 0.39
CTNS-206ENST00000488623 CXCL11O14625 94 aa17.48■□□□□ 0.39
CTNS-206ENST00000488623 IRF6O14896 467 aa17.48■□□□□ 0.39
CTNS-206ENST00000488623 VCAM1P19320 739 aa17.48■□□□□ 0.39
CTNS-206ENST00000488623 GJA5P36382 358 aa17.48■□□□□ 0.39
CTNS-206ENST00000488623 PPIL2Q13356 520 aa17.48■□□□□ 0.39
CTNS-206ENST00000488623 KRT40Q6A162 431 aa17.48■□□□□ 0.39
CTNS-206ENST00000488623 HOMER1Q86YM7 354 aa17.48■□□□□ 0.39
CTNS-206ENST00000488623 CHURC1Q8WUH1 139 aa17.48■□□□□ 0.39
CTNS-206ENST00000488623 OPTNQ96CV9 577 aa17.48■□□□□ 0.39
CTNS-206ENST00000488623 FEM1BQ9UK73 627 aa17.48■□□□□ 0.39
CTNS-206ENST00000488623 PRR12Q9ULL5 1215 aa17.48■□□□□ 0.39
CTNS-206ENST00000488623 KCNH4Q9UQ05 1017 aa17.48■□□□□ 0.39
CTNS-206ENST00000488623 PNMA6FA0A0J9YX94 578 aa17.47■□□□□ 0.39
CTNS-206ENST00000488623 STAT2P52630 851 aa17.47■□□□□ 0.39
CTNS-206ENST00000488623 SNAP25P60880 206 aa17.47■□□□□ 0.39
CTNS-206ENST00000488623 IKQ13123 557 aaPredicted RBP17.47■□□□□ 0.39
CTNS-206ENST00000488623 PAXIP1Q6ZW49 1069 aaPredicted RBP17.47■□□□□ 0.39
CTNS-206ENST00000488623 FAM160B2Q86V87 743 aa17.47■□□□□ 0.39
CTNS-206ENST00000488623 GPKOWQ92917 476 aaPredicted RBP eCLIP17.47■□□□□ 0.39
CTNS-206ENST00000488623 TNPO1Q92973 898 aaKnown RBP17.47■□□□□ 0.39
CTNS-206ENST00000488623 RPAP3Q9H6T3 665 aaPredicted RBP17.47■□□□□ 0.39
CTNS-206ENST00000488623 FBXO28Q9NVF7 368 aa17.47■□□□□ 0.39
CTNS-206ENST00000488623 TMOD4Q9NZQ9 345 aa17.47■□□□□ 0.39
CTNS-206ENST00000488623 VPS54Q9P1Q0 977 aa17.47■□□□□ 0.39
CTNS-206ENST00000488623 KCNJ14Q9UNX9 436 aa17.47■□□□□ 0.39
CTNS-206ENST00000488623 TLL2Q9Y6L7 1015 aa17.47■□□□□ 0.39
CTNS-206ENST00000488623 PTPRFP10586 1907 aa17.47■□□□□ 0.39
CTNS-206ENST00000488623 ZBTB5O15062 677 aa17.46■□□□□ 0.39
CTNS-206ENST00000488623 PPP1R11O60927 126 aaPredicted RBP17.46■□□□□ 0.39
CTNS-206ENST00000488623 F13A1P00488 732 aa17.46■□□□□ 0.39
CTNS-206ENST00000488623 WWC2Q6AWC2 1192 aa17.46■□□□□ 0.39
CTNS-206ENST00000488623 SEC63Q9UGP8 760 aaKnown RBP17.46■□□□□ 0.39
CTNS-206ENST00000488623 A0A0G2JLL6 359 aaPredicted RBP17.45■□□□□ 0.38
CTNS-206ENST00000488623 STXBP3O00186 592 aa17.45■□□□□ 0.38
CTNS-206ENST00000488623 FOXN1O15353 648 aa17.45■□□□□ 0.38
CTNS-206ENST00000488623 GRM1Q13255 1194 aa17.45■□□□□ 0.38
CTNS-206ENST00000488623 TRIM29Q14134 588 aa17.45■□□□□ 0.38
CTNS-206ENST00000488623 CDC37Q16543 378 aaPredicted RBP17.45■□□□□ 0.38
CTNS-206ENST00000488623 QRICH1Q2TAL8 776 aa17.45■□□□□ 0.38
CTNS-206ENST00000488623 CYP4F22Q6NT55 531 aa17.45■□□□□ 0.38
CTNS-206ENST00000488623 TYW1BQ6NUM6 668 aa17.45■□□□□ 0.38
CTNS-206ENST00000488623 PRRT2Q7Z6L0 340 aaPredicted RBP17.45■□□□□ 0.38
CTNS-206ENST00000488623 FERMT3Q86UX7 667 aa17.45■□□□□ 0.38
CTNS-206ENST00000488623 KIFC2Q96AC6 838 aa17.45■□□□□ 0.38
CTNS-206ENST00000488623 CAPNS2Q96L46 248 aa17.45■□□□□ 0.38
CTNS-206ENST00000488623 PHF20Q9BVI0 1012 aa17.45■□□□□ 0.38
CTNS-206ENST00000488623 SH3GLB2Q9NR46 395 aa17.45■□□□□ 0.38
CTNS-206ENST00000488623 BARHL2Q9NY43 387 aa17.45■□□□□ 0.38
CTNS-206ENST00000488623 XBP1P17861 261 aa17.44■□□□□ 0.38
CTNS-206ENST00000488623 RESTQ13127 1097 aa17.44■□□□□ 0.38
CTNS-206ENST00000488623 MOGSQ13724 837 aa17.44■□□□□ 0.38
CTNS-206ENST00000488623 MCTP1Q6DN14 999 aa17.44■□□□□ 0.38
CTNS-206ENST00000488623 CATSPERGQ6ZRH7 1159 aa17.44■□□□□ 0.38
CTNS-206ENST00000488623 HEATR3Q7Z4Q2 680 aa17.44■□□□□ 0.38
CTNS-206ENST00000488623 PRPF38AQ8NAV1 312 aaKnown RBP17.44■□□□□ 0.38
CTNS-206ENST00000488623 COA7Q96BR5 231 aa17.44■□□□□ 0.38
CTNS-206ENST00000488623 WNK4Q96J92 1243 aa17.44■□□□□ 0.38
CTNS-206ENST00000488623 TANGO6Q9C0B7 1094 aa17.44■□□□□ 0.38
CTNS-206ENST00000488623 MMP1P03956 469 aa17.43■□□□□ 0.38
CTNS-206ENST00000488623 HUNKP57058 714 aa17.43■□□□□ 0.38
CTNS-206ENST00000488623 NLRP5P59047 1200 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms