RNA–Protein interactions for RNA: ENST00000487602.5

RBM28-206, Transcript of RNA binding motif protein 28, humanhuman

TSL 5

Gene RBM28, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-206ENST00000487602 FBXO18Q8NFZ0 1043 aa9.26□□□□□ -0.93
RBM28-206ENST00000487602 CHURC1Q8WUH1 139 aa9.26□□□□□ -0.93
RBM28-206ENST00000487602 PIBF1Q8WXW3 757 aa9.26□□□□□ -0.93
RBM28-206ENST00000487602 MTMR8Q96EF0 704 aa9.26□□□□□ -0.93
RBM28-206ENST00000487602 RRP36Q96EU6 259 aaKnown RBP9.26□□□□□ -0.93
RBM28-206ENST00000487602 CLMNQ96JQ2 1002 aa9.26□□□□□ -0.93
RBM28-206ENST00000487602 C12orf42Q96LP6 360 aa9.26□□□□□ -0.93
RBM28-206ENST00000487602 PIGSQ96S52 555 aa9.26□□□□□ -0.93
RBM28-206ENST00000487602 ELP3Q9H9T3 547 aa9.26□□□□□ -0.93
RBM28-206ENST00000487602 JMJD4Q9H9V9 463 aa9.26□□□□□ -0.93
RBM28-206ENST00000487602 ISY1Q9ULR0 285 aaKnown RBP9.26□□□□□ -0.93
RBM28-206ENST00000487602 TRPM7Q96QT4 1865 aa9.25□□□□□ -0.93
RBM28-206ENST00000487602 PNMA6FA0A0J9YX94 578 aa9.25□□□□□ -0.93
RBM28-206ENST00000487602 SPDYE5A6NIY4 337 aa9.25□□□□□ -0.93
RBM28-206ENST00000487602 TRIM75PA6NK02 468 aa9.25□□□□□ -0.93
RBM28-206ENST00000487602 CXCL11O14625 94 aa9.25□□□□□ -0.93
RBM28-206ENST00000487602 F13A1P00488 732 aa9.25□□□□□ -0.93
RBM28-206ENST00000487602 SCG2P13521 617 aa9.25□□□□□ -0.93
RBM28-206ENST00000487602 XBP1P17861 261 aa9.25□□□□□ -0.93
RBM28-206ENST00000487602 HMGCS2P54868 508 aa9.25□□□□□ -0.93
RBM28-206ENST00000487602 GUCY1B3Q02153 619 aa9.25□□□□□ -0.93
RBM28-206ENST00000487602 PPIL2Q13356 520 aa9.25□□□□□ -0.93
RBM28-206ENST00000487602 TRIM29Q14134 588 aa9.25□□□□□ -0.93
RBM28-206ENST00000487602 SYDE2Q5VT97 1194 aa9.25□□□□□ -0.93
RBM28-206ENST00000487602 FOXD4L5Q5VV16 416 aaPredicted RBP9.25□□□□□ -0.93
RBM28-206ENST00000487602 CST9Q5W186 159 aa9.25□□□□□ -0.93
RBM28-206ENST00000487602 KRT40Q6A162 431 aa9.25□□□□□ -0.93
RBM28-206ENST00000487602 FAM160B2Q86V87 743 aa9.25□□□□□ -0.93
RBM28-206ENST00000487602 RBM46Q8TBY0 533 aaKnown RBP9.25□□□□□ -0.93
RBM28-206ENST00000487602 FOXD4L4Q8WXT5 416 aaPredicted RBP9.25□□□□□ -0.93
RBM28-206ENST00000487602 TNPO1Q92973 898 aaKnown RBP9.25□□□□□ -0.93
RBM28-206ENST00000487602 SLC10A4Q96EP9 437 aa9.25□□□□□ -0.93
RBM28-206ENST00000487602 TMOD4Q9NZQ9 345 aa9.25□□□□□ -0.93
RBM28-206ENST00000487602 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.25□□□□□ -0.93
RBM28-206ENST00000487602 FEM1BQ9UK73 627 aa9.25□□□□□ -0.93
RBM28-206ENST00000487602 IRF6O14896 467 aa9.24□□□□□ -0.93
RBM28-206ENST00000487602 ZBTB5O15062 677 aa9.24□□□□□ -0.93
RBM28-206ENST00000487602 VCAM1P19320 739 aa9.24□□□□□ -0.93
RBM28-206ENST00000487602 STAT2P52630 851 aa9.24□□□□□ -0.93
RBM28-206ENST00000487602 IKQ13123 557 aaPredicted RBP9.24□□□□□ -0.93
RBM28-206ENST00000487602 DGKZQ13574 1117 aa9.24□□□□□ -0.93
RBM28-206ENST00000487602 HOMER1Q86YM7 354 aa9.24□□□□□ -0.93
RBM28-206ENST00000487602 FAM177A1Q8N128 213 aaPredicted RBP9.24□□□□□ -0.93
RBM28-206ENST00000487602 SHISA4Q96DD7 197 aa9.24□□□□□ -0.93
RBM28-206ENST00000487602 SH3GLB2Q9NR46 395 aa9.24□□□□□ -0.93
RBM28-206ENST00000487602 GJB4Q9NTQ9 266 aa9.24□□□□□ -0.93
RBM28-206ENST00000487602 VPS54Q9P1Q0 977 aa9.24□□□□□ -0.93
RBM28-206ENST00000487602 SEC63Q9UGP8 760 aaKnown RBP9.24□□□□□ -0.93
RBM28-206ENST00000487602 PRR12Q9ULL5 1215 aa9.24□□□□□ -0.93
RBM28-206ENST00000487602 KCNH4Q9UQ05 1017 aa9.24□□□□□ -0.93
RBM28-206ENST00000487602 A0A0G2JLL6 359 aaPredicted RBP9.23□□□□□ -0.93
RBM28-206ENST00000487602 hCG_1984214I3L0E3 225 aa9.23□□□□□ -0.93
RBM28-206ENST00000487602 STXBP3O00186 592 aa9.23□□□□□ -0.93
RBM28-206ENST00000487602 GJA5P36382 358 aa9.23□□□□□ -0.93
RBM28-206ENST00000487602 RESTQ13127 1097 aa9.23□□□□□ -0.93
RBM28-206ENST00000487602 SAFBQ15424 915 aaKnown RBP eCLIP9.23□□□□□ -0.93
RBM28-206ENST00000487602 QRICH1Q2TAL8 776 aa9.23□□□□□ -0.93
RBM28-206ENST00000487602 WWC2Q6AWC2 1192 aa9.23□□□□□ -0.93
RBM28-206ENST00000487602 MCTP1Q6DN14 999 aa9.23□□□□□ -0.93
RBM28-206ENST00000487602 HEATR3Q7Z4Q2 680 aa9.23□□□□□ -0.93
RBM28-206ENST00000487602 PRRT2Q7Z6L0 340 aaPredicted RBP9.23□□□□□ -0.93
RBM28-206ENST00000487602 FERMT3Q86UX7 667 aa9.23□□□□□ -0.93
RBM28-206ENST00000487602 ZNF713Q8N859 430 aaPredicted RBP9.23□□□□□ -0.93
RBM28-206ENST00000487602 SMC1BQ8NDV3 1235 aa9.23□□□□□ -0.93
RBM28-206ENST00000487602 GPKOWQ92917 476 aaPredicted RBP eCLIP9.23□□□□□ -0.932e-10■□□□□ 10.3
RBM28-206ENST00000487602 OPTNQ96CV9 577 aa9.23□□□□□ -0.93
RBM28-206ENST00000487602 OTUD5Q96G74 571 aa9.23□□□□□ -0.93
RBM28-206ENST00000487602 SLF1Q9BQI6 1058 aa9.23□□□□□ -0.93
RBM28-206ENST00000487602 PHF20Q9BVI0 1012 aa9.23□□□□□ -0.93
RBM28-206ENST00000487602 ZSCAN16Q9H4T2 348 aaPredicted RBP9.23□□□□□ -0.93
RBM28-206ENST00000487602 RPAP3Q9H6T3 665 aaPredicted RBP9.23□□□□□ -0.93
RBM28-206ENST00000487602 FBXO28Q9NVF7 368 aa9.23□□□□□ -0.93
RBM28-206ENST00000487602 BARHL2Q9NY43 387 aa9.23□□□□□ -0.93
RBM28-206ENST00000487602 KCNJ14Q9UNX9 436 aa9.23□□□□□ -0.93
RBM28-206ENST00000487602 PASKQ96RG2 1323 aa9.23□□□□□ -0.93
RBM28-206ENST00000487602 PHIPQ8WWQ0 1821 aa9.22□□□□□ -0.93
RBM28-206ENST00000487602 USP17L15C9J2P7 530 aa9.22□□□□□ -0.93
RBM28-206ENST00000487602 USP17L13C9JLJ4 530 aa9.22□□□□□ -0.93
RBM28-206ENST00000487602 USP17L11C9JVI0 530 aa9.22□□□□□ -0.93
RBM28-206ENST00000487602 USP17L18D6R9N7 530 aa9.22□□□□□ -0.93
RBM28-206ENST00000487602 USP17L22D6RA61 530 aa9.22□□□□□ -0.93
RBM28-206ENST00000487602 USP17L17D6RBQ6 530 aa9.22□□□□□ -0.93
RBM28-206ENST00000487602 USP17L19D6RCP7 530 aa9.22□□□□□ -0.93
RBM28-206ENST00000487602 USP17L20D6RJB6 530 aa9.22□□□□□ -0.93
RBM28-206ENST00000487602 PPP1R11O60927 126 aaPredicted RBP9.22□□□□□ -0.93
RBM28-206ENST00000487602 TOMM70O94826 608 aa9.22□□□□□ -0.93
RBM28-206ENST00000487602 MMP1P03956 469 aa9.22□□□□□ -0.93
RBM28-206ENST00000487602 FDX1P10109 184 aa9.22□□□□□ -0.93
RBM28-206ENST00000487602 YY1P25490 414 aa9.22□□□□□ -0.93
RBM28-206ENST00000487602 NLRP5P59047 1200 aa9.22□□□□□ -0.93
RBM28-206ENST00000487602 KIF23Q02241 960 aaPredicted RBP9.22□□□□□ -0.93
RBM28-206ENST00000487602 USP17L24Q0WX57 530 aa9.22□□□□□ -0.93
RBM28-206ENST00000487602 CDC37Q16543 378 aaPredicted RBP9.22□□□□□ -0.93
RBM28-206ENST00000487602 GALNT17Q6IS24 598 aa9.22□□□□□ -0.93
RBM28-206ENST00000487602 TYW1BQ6NUM6 668 aa9.22□□□□□ -0.93
RBM28-206ENST00000487602 CATSPERGQ6ZRH7 1159 aa9.22□□□□□ -0.93
RBM28-206ENST00000487602 CLEC17AQ6ZS10 378 aa9.22□□□□□ -0.93
RBM28-206ENST00000487602 PRPF38AQ8NAV1 312 aaKnown RBP9.22□□□□□ -0.93
RBM28-206ENST00000487602 PROCA1Q8NCQ7 364 aaPredicted RBP9.22□□□□□ -0.93
RBM28-206ENST00000487602 CCDC148Q8NFR7 591 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms