RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 TNKSO95271 1327 aa12.54□□□□□ -0.4
TOP3B-216ENST00000487485 RPTORQ8N122 1335 aa12.54□□□□□ -0.4
TOP3B-216ENST00000487485 ERICH2A1L162 156 aa12.53□□□□□ -0.4
TOP3B-216ENST00000487485 F5H6K3 240 aa12.53□□□□□ -0.4
TOP3B-216ENST00000487485 IFIT3O14879 490 aaKnown RBP12.53□□□□□ -0.4
TOP3B-216ENST00000487485 PRC1O43663 620 aa12.53□□□□□ -0.4
TOP3B-216ENST00000487485 HMGB1P09429 215 aaKnown RBP12.53□□□□□ -0.4
TOP3B-216ENST00000487485 TOP1P11387 765 aaKnown RBP12.53□□□□□ -0.4
TOP3B-216ENST00000487485 PSMA5P28066 241 aa12.53□□□□□ -0.4
TOP3B-216ENST00000487485 EXOSC10Q01780 885 aaKnown RBP12.53□□□□□ -0.4
TOP3B-216ENST00000487485 KLRC3Q07444 240 aa12.53□□□□□ -0.4
TOP3B-216ENST00000487485 SART3Q15020 963 aaKnown RBP12.53□□□□□ -0.4
TOP3B-216ENST00000487485 SEC23AQ15436 765 aa12.53□□□□□ -0.4
TOP3B-216ENST00000487485 KIAA1755Q5JYT7 1200 aa12.53□□□□□ -0.4
TOP3B-216ENST00000487485 DHX32Q7L7V1 743 aaKnown RBP12.53□□□□□ -0.4
TOP3B-216ENST00000487485 TDHQ8IZJ6 230 aa12.53□□□□□ -0.4
TOP3B-216ENST00000487485 SPICE1Q8N0Z3 855 aa12.53□□□□□ -0.4
TOP3B-216ENST00000487485 ENAHQ8N8S7 591 aaPredicted RBP12.53□□□□□ -0.4
TOP3B-216ENST00000487485 IGDCC4Q8TDY8 1250 aa12.53□□□□□ -0.4
TOP3B-216ENST00000487485 ANKS1AQ92625 1134 aa12.53□□□□□ -0.4
TOP3B-216ENST00000487485 UBE2OQ9C0C9 1292 aaKnown RBP12.53□□□□□ -0.4
TOP3B-216ENST00000487485 PNMA3Q9UL41 463 aa12.53□□□□□ -0.4
TOP3B-216ENST00000487485 OGDHLQ9ULD0 1010 aa12.53□□□□□ -0.4
TOP3B-216ENST00000487485 SYNPO2Q9UMS6 1093 aa12.53□□□□□ -0.4
TOP3B-216ENST00000487485 DNAH12Q6ZR08 3092 aa12.52□□□□□ -0.4
TOP3B-216ENST00000487485 CPA1P15085 419 aa12.52□□□□□ -0.41
TOP3B-216ENST00000487485 VCAM1P19320 739 aa12.52□□□□□ -0.41
TOP3B-216ENST00000487485 CASTP20810 708 aaKnown RBP12.52□□□□□ -0.41
TOP3B-216ENST00000487485 GCLCP48506 637 aaPredicted RBP12.52□□□□□ -0.41
TOP3B-216ENST00000487485 ANAPC15P60006 121 aa12.52□□□□□ -0.41
TOP3B-216ENST00000487485 PABPC4Q13310 644 aaKnown RBP eCLIP12.52□□□□□ -0.41
TOP3B-216ENST00000487485 WTAPQ15007 396 aa12.52□□□□□ -0.41
TOP3B-216ENST00000487485 TMEM67Q5HYA8 995 aa12.52□□□□□ -0.41
TOP3B-216ENST00000487485 IFIT1BQ5T764 474 aaKnown RBP12.52□□□□□ -0.41
TOP3B-216ENST00000487485 BLOC1S2Q6QNY1 142 aa12.52□□□□□ -0.41
TOP3B-216ENST00000487485 GMCL1P1Q8NEA9 526 aa12.52□□□□□ -0.41
TOP3B-216ENST00000487485 TRIB2Q92519 343 aa12.52□□□□□ -0.41
TOP3B-216ENST00000487485 LPAR1Q92633 364 aa12.52□□□□□ -0.41
TOP3B-216ENST00000487485 TMEM87BQ96K49 555 aa12.52□□□□□ -0.41
TOP3B-216ENST00000487485 MTA3Q9BTC8 594 aa12.52□□□□□ -0.41
TOP3B-216ENST00000487485 COL25A1Q9BXS0 654 aaPredicted RBP12.52□□□□□ -0.41
TOP3B-216ENST00000487485 C22orf23Q9BZE7 217 aa12.52□□□□□ -0.41
TOP3B-216ENST00000487485 ASCC2Q9H1I8 757 aaPredicted RBP12.52□□□□□ -0.41
TOP3B-216ENST00000487485 KAT14Q9H8E8 782 aa12.52□□□□□ -0.41
TOP3B-216ENST00000487485 UPF2Q9HAU5 1272 aaKnown RBP12.52□□□□□ -0.41
TOP3B-216ENST00000487485 WDR46O15213 610 aaKnown RBP12.51□□□□□ -0.41
TOP3B-216ENST00000487485 PEX10O60683 326 aa12.51□□□□□ -0.41
TOP3B-216ENST00000487485 NDUFB10O96000 172 aa12.51□□□□□ -0.41
TOP3B-216ENST00000487485 CYP2B6P20813 491 aa12.51□□□□□ -0.41
TOP3B-216ENST00000487485 HOXA7P31268 230 aaPredicted RBP12.51□□□□□ -0.41
TOP3B-216ENST00000487485 SLFN13Q68D06 897 aa12.51□□□□□ -0.41
TOP3B-216ENST00000487485 PNMA1Q8ND90 353 aa12.51□□□□□ -0.41
TOP3B-216ENST00000487485 CHMP4CQ96CF2 233 aa12.51□□□□□ -0.41
TOP3B-216ENST00000487485 TCEANC2Q96MN5 208 aa12.51□□□□□ -0.41
TOP3B-216ENST00000487485 LRRC2Q9BYS8 371 aa12.51□□□□□ -0.41
TOP3B-216ENST00000487485 TM6SF1Q9BZW5 370 aa12.51□□□□□ -0.41
TOP3B-216ENST00000487485 RPAP3Q9H6T3 665 aaPredicted RBP12.51□□□□□ -0.41
TOP3B-216ENST00000487485 SENP2Q9HC62 589 aa12.51□□□□□ -0.41
TOP3B-216ENST00000487485 ZSWIM6Q9HCJ5 1215 aa12.51□□□□□ -0.41
TOP3B-216ENST00000487485 MTMR7Q9Y216 660 aa12.51□□□□□ -0.41
TOP3B-216ENST00000487485 PFASO15067 1338 aa12.51□□□□□ -0.41
TOP3B-216ENST00000487485 WDR19Q8NEZ3 1342 aa12.51□□□□□ -0.41
TOP3B-216ENST00000487485 PARP14Q460N5 1801 aa12.51□□□□□ -0.41
TOP3B-216ENST00000487485 USP17L15C9J2P7 530 aa12.5□□□□□ -0.41
TOP3B-216ENST00000487485 USP17L13C9JLJ4 530 aa12.5□□□□□ -0.41
TOP3B-216ENST00000487485 USP17L11C9JVI0 530 aa12.5□□□□□ -0.41
TOP3B-216ENST00000487485 USP17L18D6R9N7 530 aa12.5□□□□□ -0.41
TOP3B-216ENST00000487485 USP17L22D6RA61 530 aa12.5□□□□□ -0.41
TOP3B-216ENST00000487485 USP17L17D6RBQ6 530 aa12.5□□□□□ -0.41
TOP3B-216ENST00000487485 USP17L19D6RCP7 530 aa12.5□□□□□ -0.41
TOP3B-216ENST00000487485 USP17L20D6RJB6 530 aa12.5□□□□□ -0.41
TOP3B-216ENST00000487485 SH2B2O14492 632 aaPredicted RBP12.5□□□□□ -0.41
TOP3B-216ENST00000487485 RPS6KB1P23443 525 aa12.5□□□□□ -0.41
TOP3B-216ENST00000487485 USP17L24Q0WX57 530 aa12.5□□□□□ -0.41
TOP3B-216ENST00000487485 FAM83BQ5T0W9 1011 aa12.5□□□□□ -0.41
TOP3B-216ENST00000487485 MAP3K21Q5TCX8 1036 aa12.5□□□□□ -0.41
TOP3B-216ENST00000487485 CATSPERGQ6ZRH7 1159 aa12.5□□□□□ -0.41
TOP3B-216ENST00000487485 RUFY3Q7L099 469 aa12.5□□□□□ -0.41
TOP3B-216ENST00000487485 TMTC2Q8N394 836 aa12.5□□□□□ -0.41
TOP3B-216ENST00000487485 NUP88Q99567 741 aaPredicted RBP12.5□□□□□ -0.41
TOP3B-216ENST00000487485 LY9Q9HBG7 655 aa12.5□□□□□ -0.41
TOP3B-216ENST00000487485 GPHNQ9NQX3 736 aaPredicted RBP12.5□□□□□ -0.41
TOP3B-216ENST00000487485 CYP46A1Q9Y6A2 500 aa12.5□□□□□ -0.41
TOP3B-216ENST00000487485 PLXNB2O15031 1838 aa12.5□□□□□ -0.41
TOP3B-216ENST00000487485 RLFQ13129 1914 aa12.5□□□□□ -0.41
TOP3B-216ENST00000487485 VCANP13611 3396 aa12.49□□□□□ -0.41
TOP3B-216ENST00000487485 PRUNE2Q8WUY3 3088 aa12.49□□□□□ -0.41
TOP3B-216ENST00000487485 BMP3P12645 472 aa12.49□□□□□ -0.41
TOP3B-216ENST00000487485 PRKAR2AP13861 404 aaKnown RBP12.49□□□□□ -0.41
TOP3B-216ENST00000487485 LIFRP42702 1097 aa12.49□□□□□ -0.41
TOP3B-216ENST00000487485 SLC1A4P43007 532 aa12.49□□□□□ -0.41
TOP3B-216ENST00000487485 RBM25P49756 843 aaKnown RBP12.49□□□□□ -0.41
TOP3B-216ENST00000487485 IRX3P78415 501 aaPredicted RBP12.49□□□□□ -0.41
TOP3B-216ENST00000487485 NFXL1Q6ZNB6 911 aa12.49□□□□□ -0.41
TOP3B-216ENST00000487485 Q6ZUG5 572 aa12.49□□□□□ -0.41
TOP3B-216ENST00000487485 IL17RAQ96F46 866 aa12.49□□□□□ -0.41
TOP3B-216ENST00000487485 GMCL1Q96IK5 515 aa12.49□□□□□ -0.41
TOP3B-216ENST00000487485 TANGO6Q9C0B7 1094 aa12.49□□□□□ -0.41
TOP3B-216ENST00000487485 MORF4L1Q9UBU8 362 aa12.49□□□□□ -0.41
TOP3B-216ENST00000487485 CCDC69A6NI79 296 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms