RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 KRTAP4-12Q9BQ66 201 aa6.72□□□□□ -1.33
LINC00888-204ENST00000487386 FAM86C1Q9NVL1 165 aa6.72□□□□□ -1.33
LINC00888-204ENST00000487386 ZNF205O95201 554 aa6.71□□□□□ -1.34
LINC00888-204ENST00000487386 GSNP06396 782 aa6.71□□□□□ -1.34
LINC00888-204ENST00000487386 VAV1P15498 845 aa6.71□□□□□ -1.34
LINC00888-204ENST00000487386 ERVFC1P60507 584 aa6.71□□□□□ -1.34
LINC00888-204ENST00000487386 TCEAL1Q15170 157 aa6.71□□□□□ -1.34
LINC00888-204ENST00000487386 VHLLQ6RSH7 139 aa6.71□□□□□ -1.34
LINC00888-204ENST00000487386 ZNF513Q8N8E2 541 aaPredicted RBP6.71□□□□□ -1.34
LINC00888-204ENST00000487386 PDZD8Q8NEN9 1154 aa6.71□□□□□ -1.34
LINC00888-204ENST00000487386 DHX38Q92620 1227 aaKnown RBP6.71□□□□□ -1.34
LINC00888-204ENST00000487386 ASIC4Q96FT7 647 aa6.71□□□□□ -1.34
LINC00888-204ENST00000487386 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.71□□□□□ -1.34
LINC00888-204ENST00000487386 BTBD11A6QL63 1104 aa6.7□□□□□ -1.34
LINC00888-204ENST00000487386 MEIS1O00470 390 aa6.7□□□□□ -1.34
LINC00888-204ENST00000487386 EPHX1P07099 455 aa6.7□□□□□ -1.34
LINC00888-204ENST00000487386 ITGA4P13612 1032 aa6.7□□□□□ -1.34
LINC00888-204ENST00000487386 HK2P52789 917 aa6.7□□□□□ -1.34
LINC00888-204ENST00000487386 NR0B2Q15466 257 aa6.7□□□□□ -1.34
LINC00888-204ENST00000487386 NOL9Q5SY16 702 aaKnown RBP6.7□□□□□ -1.34
LINC00888-204ENST00000487386 HEATR6Q6AI08 1181 aaKnown RBP6.7□□□□□ -1.34
LINC00888-204ENST00000487386 KIAA1211LQ6NV74 962 aa6.7□□□□□ -1.34
LINC00888-204ENST00000487386 CRTC3Q6UUV7 619 aa6.7□□□□□ -1.34
LINC00888-204ENST00000487386 FIBCD1Q8N539 461 aa6.7□□□□□ -1.34
LINC00888-204ENST00000487386 BRF1Q92994 677 aa6.7□□□□□ -1.34
LINC00888-204ENST00000487386 FMNL2Q96PY5 1086 aa6.7□□□□□ -1.34
LINC00888-204ENST00000487386 DSCC1Q9BVC3 393 aa6.7□□□□□ -1.34
LINC00888-204ENST00000487386 ACTR10Q9NZ32 417 aa6.7□□□□□ -1.34
LINC00888-204ENST00000487386 WHRNQ9P202 907 aa6.7□□□□□ -1.34
LINC00888-204ENST00000487386 DIS3Q9Y2L1 958 aaKnown RBP6.7□□□□□ -1.34
LINC00888-204ENST00000487386 SSU72P8A0A1W2PR75 194 aa6.69□□□□□ -1.34
LINC00888-204ENST00000487386 RPL10P27635 214 aaKnown RBP6.69□□□□□ -1.34
LINC00888-204ENST00000487386 CEBPAP49715 358 aaPredicted RBP6.69□□□□□ -1.34
LINC00888-204ENST00000487386 DUSP4Q13115 394 aa6.69□□□□□ -1.34
LINC00888-204ENST00000487386 NCAPHQ15003 741 aa6.69□□□□□ -1.34
LINC00888-204ENST00000487386 RTP2Q5QGT7 225 aa6.69□□□□□ -1.34
LINC00888-204ENST00000487386 WAPLQ7Z5K2 1190 aa6.69□□□□□ -1.34
LINC00888-204ENST00000487386 FAM168AQ92567 244 aa6.69□□□□□ -1.34
LINC00888-204ENST00000487386 KIRREL1Q96J84 757 aa6.69□□□□□ -1.34
LINC00888-204ENST00000487386 SLC12A9Q9BXP2 914 aa6.69□□□□□ -1.34
LINC00888-204ENST00000487386 FITM1A5D6W6 292 aa6.68□□□□□ -1.34
LINC00888-204ENST00000487386 ANKRD34BA5PLL1 514 aa6.68□□□□□ -1.34
LINC00888-204ENST00000487386 NOTOA8MTQ0 251 aa6.68□□□□□ -1.34
LINC00888-204ENST00000487386 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.68□□□□□ -1.34
LINC00888-204ENST00000487386 H0Y8X5 98 aa6.68□□□□□ -1.34
LINC00888-204ENST00000487386 FKTNO75072 461 aa6.68□□□□□ -1.34
LINC00888-204ENST00000487386 ZPBP2Q6X784 338 aa6.68□□□□□ -1.34
LINC00888-204ENST00000487386 ZSWIM9Q86XI8 627 aa6.68□□□□□ -1.34
LINC00888-204ENST00000487386 ARHGEF39Q8N4T4 335 aa6.68□□□□□ -1.34
LINC00888-204ENST00000487386 OXR1Q8N573 874 aa6.68□□□□□ -1.34
LINC00888-204ENST00000487386 ANKS4BQ8N8V4 417 aa6.68□□□□□ -1.34
LINC00888-204ENST00000487386 MYLIPQ8WY64 445 aa6.68□□□□□ -1.34
LINC00888-204ENST00000487386 SYTL4Q96C24 671 aaPredicted RBP6.68□□□□□ -1.34
LINC00888-204ENST00000487386 RCC1LQ96I51 464 aaKnown RBP6.68□□□□□ -1.34
LINC00888-204ENST00000487386 MAP6Q96JE9 813 aa6.68□□□□□ -1.34
LINC00888-204ENST00000487386 SF3B6Q9Y3B4 125 aaKnown RBP6.68□□□□□ -1.34
LINC00888-204ENST00000487386 ZNF503-AS2A6NEH8 195 aa6.67□□□□□ -1.34
LINC00888-204ENST00000487386 PAX4O43316 350 aa6.67□□□□□ -1.34
LINC00888-204ENST00000487386 KLF4O43474 513 aa6.67□□□□□ -1.34
LINC00888-204ENST00000487386 GLI1P08151 1106 aa6.67□□□□□ -1.34
LINC00888-204ENST00000487386 RAC2P15153 192 aa6.67□□□□□ -1.34
LINC00888-204ENST00000487386 ENDOUP21128 410 aaKnown RBP6.67□□□□□ -1.34
LINC00888-204ENST00000487386 KIR2DL1P43626 348 aaPredicted RBP6.67□□□□□ -1.34
LINC00888-204ENST00000487386 KIR2DL2P43627 348 aaPredicted RBP6.67□□□□□ -1.34
LINC00888-204ENST00000487386 ZNF143P52747 638 aaPredicted RBP6.67□□□□□ -1.34
LINC00888-204ENST00000487386 CHRNEQ04844 493 aa6.67□□□□□ -1.34
LINC00888-204ENST00000487386 KCNMB1Q16558 191 aa6.67□□□□□ -1.34
LINC00888-204ENST00000487386 C6orf15Q6UXA7 325 aaPredicted RBP6.67□□□□□ -1.34
LINC00888-204ENST00000487386 SPPL2CQ8IUH8 684 aa6.67□□□□□ -1.34
LINC00888-204ENST00000487386 FAM178BQ8IXR5 827 aa6.67□□□□□ -1.34
LINC00888-204ENST00000487386 LILRA2Q8N149 483 aa6.67□□□□□ -1.34
LINC00888-204ENST00000487386 MICAL1Q8TDZ2 1067 aa6.67□□□□□ -1.34
LINC00888-204ENST00000487386 HHIPL1Q96JK4 782 aa6.67□□□□□ -1.34
LINC00888-204ENST00000487386 FGD4Q96M96 766 aa6.67□□□□□ -1.34
LINC00888-204ENST00000487386 GBP3Q9H0R5 595 aa6.67□□□□□ -1.34
LINC00888-204ENST00000487386 NOL6Q9H6R4 1146 aaKnown RBP6.67□□□□□ -1.34
LINC00888-204ENST00000487386 PPM1BO75688 479 aa6.66□□□□□ -1.34
LINC00888-204ENST00000487386 TRHRP34981 398 aaPredicted RBP6.66□□□□□ -1.34
LINC00888-204ENST00000487386 FXNQ16595 210 aa6.66□□□□□ -1.34
LINC00888-204ENST00000487386 TIGD5Q53EQ6 642 aa6.66□□□□□ -1.34
LINC00888-204ENST00000487386 CWF19L1Q69YN2 538 aaKnown RBP6.66□□□□□ -1.34
LINC00888-204ENST00000487386 ANKS3Q6ZW76 656 aa6.66□□□□□ -1.34
LINC00888-204ENST00000487386 TMEM52Q8NDY8 209 aa6.66□□□□□ -1.34
LINC00888-204ENST00000487386 ADCY4Q8NFM4 1077 aa6.66□□□□□ -1.34
LINC00888-204ENST00000487386 ABHD4Q8TB40 342 aa6.66□□□□□ -1.34
LINC00888-204ENST00000487386 SHISA4Q96DD7 197 aa6.66□□□□□ -1.34
LINC00888-204ENST00000487386 FCRL2Q96LA5 508 aaPredicted RBP6.66□□□□□ -1.34
LINC00888-204ENST00000487386 FCRL3Q96P31 734 aaPredicted RBP6.66□□□□□ -1.34
LINC00888-204ENST00000487386 APBA2Q99767 749 aa6.66□□□□□ -1.34
LINC00888-204ENST00000487386 C19orf44Q9H6X5 657 aa6.66□□□□□ -1.34
LINC00888-204ENST00000487386 ERVK13-1Q9NX77 482 aa6.66□□□□□ -1.34
LINC00888-204ENST00000487386 APEX2Q9UBZ4 518 aa6.66□□□□□ -1.34
LINC00888-204ENST00000487386 ZMYM5Q9UJ78 669 aa6.66□□□□□ -1.34
LINC00888-204ENST00000487386 RNF114Q9Y508 228 aa6.66□□□□□ -1.34
LINC00888-204ENST00000487386 FADS2P1A8MWK0 482 aa6.65□□□□□ -1.34
LINC00888-204ENST00000487386 B2RBV5 119 aa6.65□□□□□ -1.34
LINC00888-204ENST00000487386 NOP2P46087 812 aaKnown RBP6.65□□□□□ -1.34
LINC00888-204ENST00000487386 PPP2R5DQ14738 602 aa6.65□□□□□ -1.34
LINC00888-204ENST00000487386 TMEM67Q5HYA8 995 aa6.65□□□□□ -1.34
LINC00888-204ENST00000487386 LARP1BQ659C4 914 aaKnown RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms