RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 SLC7A5Q01650 507 aa8.58□□□□□ -1.04
LTN1-206ENST00000486427 ZSWIM9Q86XI8 627 aa8.58□□□□□ -1.04
LTN1-206ENST00000486427 SLC43A3Q8NBI5 491 aa8.58□□□□□ -1.04
LTN1-206ENST00000486427 KIRREL1Q96J84 757 aa8.58□□□□□ -1.04
LTN1-206ENST00000486427 HAUS7Q99871 368 aa8.58□□□□□ -1.04
LTN1-206ENST00000486427 RNF114Q9Y508 228 aa8.58□□□□□ -1.04
LTN1-206ENST00000486427 PAX4O43316 350 aa8.57□□□□□ -1.04
LTN1-206ENST00000486427 WAPLQ7Z5K2 1190 aa8.57□□□□□ -1.04
LTN1-206ENST00000486427 LINC01599Q8WXQ3 324 aa8.57□□□□□ -1.04
LTN1-206ENST00000486427 DSCC1Q9BVC3 393 aa8.57□□□□□ -1.04
LTN1-206ENST00000486427 SSU72P8A0A1W2PR75 194 aa8.56□□□□□ -1.04
LTN1-206ENST00000486427 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.56□□□□□ -1.04
LTN1-206ENST00000486427 H0Y8X5 98 aa8.56□□□□□ -1.04
LTN1-206ENST00000486427 BMP8BP34820 402 aa8.56□□□□□ -1.04
LTN1-206ENST00000486427 KCNMB1Q16558 191 aa8.56□□□□□ -1.04
LTN1-206ENST00000486427 TIGD5Q53EQ6 642 aa8.56□□□□□ -1.04
LTN1-206ENST00000486427 NOL9Q5SY16 702 aaKnown RBP8.56□□□□□ -1.04
LTN1-206ENST00000486427 VHLLQ6RSH7 139 aa8.56□□□□□ -1.04
LTN1-206ENST00000486427 PDZD8Q8NEN9 1154 aa8.56□□□□□ -1.04
LTN1-206ENST00000486427 DHX38Q92620 1227 aaKnown RBP8.56□□□□□ -1.04
LTN1-206ENST00000486427 FMNL2Q96PY5 1086 aa8.56□□□□□ -1.04
LTN1-206ENST00000486427 GMLQ99445 158 aa8.56□□□□□ -1.04
LTN1-206ENST00000486427 KLHL25Q9H0H3 589 aa8.56□□□□□ -1.04
LTN1-206ENST00000486427 C19orf44Q9H6X5 657 aa8.56□□□□□ -1.04
LTN1-206ENST00000486427 ZNF408Q9H9D4 720 aa8.56□□□□□ -1.04
LTN1-206ENST00000486427 SUSD2Q9UGT4 822 aa8.56□□□□□ -1.04
LTN1-206ENST00000486427 FHOD1Q9Y613 1164 aa8.56□□□□□ -1.04
LTN1-206ENST00000486427 ZNF503-AS2A6NEH8 195 aa8.55□□□□□ -1.04
LTN1-206ENST00000486427 ZNF205O95201 554 aa8.55□□□□□ -1.04
LTN1-206ENST00000486427 EPHX1P07099 455 aa8.55□□□□□ -1.04
LTN1-206ENST00000486427 VAV1P15498 845 aa8.55□□□□□ -1.04
LTN1-206ENST00000486427 KIAA1211LQ6NV74 962 aa8.55□□□□□ -1.04
LTN1-206ENST00000486427 FIBCD1Q8N539 461 aa8.55□□□□□ -1.04
LTN1-206ENST00000486427 MYLIPQ8WY64 445 aa8.55□□□□□ -1.04
LTN1-206ENST00000486427 PRKAG3Q9UGI9 489 aa8.55□□□□□ -1.04
LTN1-206ENST00000486427 GSNP06396 782 aa8.54□□□□□ -1.04
LTN1-206ENST00000486427 ITGA4P13612 1032 aa8.54□□□□□ -1.04
LTN1-206ENST00000486427 RAC2P15153 192 aa8.54□□□□□ -1.04
LTN1-206ENST00000486427 HEATR6Q6AI08 1181 aaKnown RBP8.54□□□□□ -1.04
LTN1-206ENST00000486427 ADCY4Q8NFM4 1077 aa8.54□□□□□ -1.04
LTN1-206ENST00000486427 ABHD4Q8TB40 342 aa8.54□□□□□ -1.04
LTN1-206ENST00000486427 SYTL4Q96C24 671 aaPredicted RBP8.54□□□□□ -1.04
LTN1-206ENST00000486427 FGD4Q96M96 766 aa8.54□□□□□ -1.04
LTN1-206ENST00000486427 NOL6Q9H6R4 1146 aaKnown RBP8.54□□□□□ -1.04
LTN1-206ENST00000486427 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.54□□□□□ -1.04
LTN1-206ENST00000486427 ZMYM5Q9UJ78 669 aa8.54□□□□□ -1.04
LTN1-206ENST00000486427 USP2O75604 605 aaPredicted RBP8.53□□□□□ -1.04
LTN1-206ENST00000486427 EFEMP2O95967 443 aa8.53□□□□□ -1.04
LTN1-206ENST00000486427 GLI1P08151 1106 aa8.53□□□□□ -1.04
LTN1-206ENST00000486427 ZC3H6P61129 1189 aaKnown RBP8.53□□□□□ -1.04
LTN1-206ENST00000486427 DUSP4Q13115 394 aa8.53□□□□□ -1.04
LTN1-206ENST00000486427 TCEAL1Q15170 157 aa8.53□□□□□ -1.04
LTN1-206ENST00000486427 NAALADL2Q58DX5 795 aa8.53□□□□□ -1.04
LTN1-206ENST00000486427 RTP2Q5QGT7 225 aa8.53□□□□□ -1.04
LTN1-206ENST00000486427 LIN37Q96GY3 246 aaPredicted RBP8.53□□□□□ -1.04
LTN1-206ENST00000486427 MAP6Q96JE9 813 aa8.53□□□□□ -1.04
LTN1-206ENST00000486427 SLC12A9Q9BXP2 914 aa8.53□□□□□ -1.04
LTN1-206ENST00000486427 ACTR10Q9NZ32 417 aa8.53□□□□□ -1.04
LTN1-206ENST00000486427 WHRNQ9P202 907 aa8.53□□□□□ -1.04
LTN1-206ENST00000486427 NOTOA8MTQ0 251 aa8.52□□□□□ -1.05
LTN1-206ENST00000486427 B2RBV5 119 aa8.52□□□□□ -1.05
LTN1-206ENST00000486427 CEBPAP49715 358 aaPredicted RBP8.52□□□□□ -1.05
LTN1-206ENST00000486427 TNNI3KQ59H18 835 aa8.52□□□□□ -1.05
LTN1-206ENST00000486427 TMEM67Q5HYA8 995 aa8.52□□□□□ -1.05
LTN1-206ENST00000486427 OXR1Q8N573 874 aa8.52□□□□□ -1.05
LTN1-206ENST00000486427 ANKS4BQ8N8V4 417 aa8.52□□□□□ -1.05
LTN1-206ENST00000486427 HHIPL1Q96JK4 782 aa8.52□□□□□ -1.05
LTN1-206ENST00000486427 ZDHHC15Q96MV8 337 aa8.52□□□□□ -1.05
LTN1-206ENST00000486427 AP5S1Q9NUS5 200 aa8.52□□□□□ -1.05
LTN1-206ENST00000486427 A0A087WZG4 1122 aa8.51□□□□□ -1.05
LTN1-206ENST00000486427 FITM1A5D6W6 292 aa8.51□□□□□ -1.05
LTN1-206ENST00000486427 PPP2R5DQ14738 602 aa8.51□□□□□ -1.05
LTN1-206ENST00000486427 NR0B2Q15466 257 aa8.51□□□□□ -1.05
LTN1-206ENST00000486427 LARP1BQ659C4 914 aaKnown RBP8.51□□□□□ -1.05
LTN1-206ENST00000486427 C6orf15Q6UXA7 325 aaPredicted RBP8.51□□□□□ -1.05
LTN1-206ENST00000486427 ZNF513Q8N8E2 541 aaPredicted RBP8.51□□□□□ -1.05
LTN1-206ENST00000486427 MICAL1Q8TDZ2 1067 aa8.51□□□□□ -1.05
LTN1-206ENST00000486427 CDADC1Q9BWV3 514 aa8.51□□□□□ -1.05
LTN1-206ENST00000486427 RNF32Q9H0A6 362 aa8.51□□□□□ -1.05
LTN1-206ENST00000486427 GBP3Q9H0R5 595 aa8.51□□□□□ -1.05
LTN1-206ENST00000486427 ERVK13-1Q9NX77 482 aa8.51□□□□□ -1.05
LTN1-206ENST00000486427 APEX2Q9UBZ4 518 aa8.51□□□□□ -1.05
LTN1-206ENST00000486427 PSPNO60542 156 aa8.5□□□□□ -1.05
LTN1-206ENST00000486427 GALK1P51570 392 aa8.5□□□□□ -1.05
LTN1-206ENST00000486427 CWF19L1Q69YN2 538 aaKnown RBP8.5□□□□□ -1.05
LTN1-206ENST00000486427 OGFOD2Q6N063 350 aa8.5□□□□□ -1.05
LTN1-206ENST00000486427 ADAT2Q7Z6V5 191 aaKnown RBP8.5□□□□□ -1.05
LTN1-206ENST00000486427 FCRL2Q96LA5 508 aaPredicted RBP8.5□□□□□ -1.05
LTN1-206ENST00000486427 DIS3Q9Y2L1 958 aaKnown RBP8.5□□□□□ -1.05
LTN1-206ENST00000486427 GSTM1P09488 218 aa8.49□□□□□ -1.05
LTN1-206ENST00000486427 KIR2DL1P43626 348 aaPredicted RBP8.49□□□□□ -1.05
LTN1-206ENST00000486427 KIR2DL2P43627 348 aaPredicted RBP8.49□□□□□ -1.05
LTN1-206ENST00000486427 CHRNEQ04844 493 aa8.49□□□□□ -1.05
LTN1-206ENST00000486427 SPPL2CQ8IUH8 684 aa8.49□□□□□ -1.05
LTN1-206ENST00000486427 FAM178BQ8IXR5 827 aa8.49□□□□□ -1.05
LTN1-206ENST00000486427 LILRA2Q8N149 483 aa8.49□□□□□ -1.05
LTN1-206ENST00000486427 TMEM52Q8NDY8 209 aa8.49□□□□□ -1.05
LTN1-206ENST00000486427 HNRNPLLQ8WVV9 542 aaKnown RBP8.49□□□□□ -1.05
LTN1-206ENST00000486427 SHISA4Q96DD7 197 aa8.49□□□□□ -1.05
LTN1-206ENST00000486427 FCRL3Q96P31 734 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms