RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 STAG1Q8WVM7 1258 aa13.02□□□□□ -0.33
SNX21-211ENST00000486336 DSCC1Q9BVC3 393 aa13.02□□□□□ -0.33
SNX21-211ENST00000486336 NBPF3Q9H094 633 aa13.02□□□□□ -0.33
SNX21-211ENST00000486336 CTNNA3Q9UI47 895 aa13.02□□□□□ -0.33
SNX21-211ENST00000486336 PGK2P07205 417 aa13.01□□□□□ -0.33
SNX21-211ENST00000486336 HOXC6P09630 235 aa13.01□□□□□ -0.33
SNX21-211ENST00000486336 CHMLP26374 656 aa13.01□□□□□ -0.33
SNX21-211ENST00000486336 COPB2P35606 906 aa13.01□□□□□ -0.33
SNX21-211ENST00000486336 STAT2P52630 851 aa13.01□□□□□ -0.33
SNX21-211ENST00000486336 SNAP25P60880 206 aa13.01□□□□□ -0.33
SNX21-211ENST00000486336 KCTD2Q14681 263 aa13.01□□□□□ -0.33
SNX21-211ENST00000486336 MAP3K21Q5TCX8 1036 aa13.01□□□□□ -0.33
SNX21-211ENST00000486336 PRPF38BQ5VTL8 546 aaKnown RBP13.01□□□□□ -0.33
SNX21-211ENST00000486336 RCSD1Q6JBY9 416 aa13.01□□□□□ -0.33
SNX21-211ENST00000486336 FAM160B2Q86V87 743 aa13.01□□□□□ -0.33
SNX21-211ENST00000486336 ESR2Q92731 530 aa13.01□□□□□ -0.33
SNX21-211ENST00000486336 GMCL1Q96IK5 515 aa13.01□□□□□ -0.33
SNX21-211ENST00000486336 ZKSCAN3Q9BRR0 538 aa13.01□□□□□ -0.33
SNX21-211ENST00000486336 TEX13BQ9BXU2 312 aa13.01□□□□□ -0.33
SNX21-211ENST00000486336 CRISPLD2Q9H0B8 497 aa13.01□□□□□ -0.33
SNX21-211ENST00000486336 TCP11L1Q9NUJ3 509 aa13.01□□□□□ -0.33
SNX21-211ENST00000486336 ZNF214Q9UL59 606 aaPredicted RBP13.01□□□□□ -0.33
SNX21-211ENST00000486336 COL11A1P12107 1806 aaPredicted RBP13□□□□□ -0.33
SNX21-211ENST00000486336 NEDD4P46934 1319 aa13□□□□□ -0.33
SNX21-211ENST00000486336 TOP1P11387 765 aaKnown RBP13□□□□□ -0.33
SNX21-211ENST00000486336 PCP11498 1178 aaKnown RBP13□□□□□ -0.33
SNX21-211ENST00000486336 RASGRP2Q7LDG7 609 aa13□□□□□ -0.33
SNX21-211ENST00000486336 ABRAQ8N0Z2 381 aa13□□□□□ -0.33
SNX21-211ENST00000486336 DDX11Q96FC9 970 aa13□□□□□ -0.33
SNX21-211ENST00000486336 PAWRQ96IZ0 340 aaKnown RBP13□□□□□ -0.33
SNX21-211ENST00000486336 TMEM47Q9BQJ4 181 aa13□□□□□ -0.33
SNX21-211ENST00000486336 HTATIP2Q9BUP3 242 aa13□□□□□ -0.33
SNX21-211ENST00000486336 IL25Q9H293 177 aa13□□□□□ -0.33
SNX21-211ENST00000486336 SLC38A10Q9HBR0 1119 aa13□□□□□ -0.33
SNX21-211ENST00000486336 GPCPD1Q9NPB8 672 aa13□□□□□ -0.33
SNX21-211ENST00000486336 RIPK3Q9Y572 518 aa13□□□□□ -0.33
SNX21-211ENST00000486336 A0A0G2JMZ2 1700 aa12.99□□□□□ -0.33
SNX21-211ENST00000486336 FRMPD2Q68DX3 1309 aaPredicted RBP12.99□□□□□ -0.33
SNX21-211ENST00000486336 B4E1Z4 1266 aa12.99□□□□□ -0.33
SNX21-211ENST00000486336 KDM4AO75164 1064 aa12.99□□□□□ -0.33
SNX21-211ENST00000486336 CAPN2P17655 700 aa12.99□□□□□ -0.33
SNX21-211ENST00000486336 PRAMEF19Q5SWL8 479 aa12.99□□□□□ -0.33
SNX21-211ENST00000486336 OLFML2BQ68BL8 750 aa12.99□□□□□ -0.33
SNX21-211ENST00000486336 CCDC174Q6PII3 467 aa12.99□□□□□ -0.33
SNX21-211ENST00000486336 CENPQQ7L2Z9 268 aaPredicted RBP12.99□□□□□ -0.33
SNX21-211ENST00000486336 NECAB2Q7Z6G3 386 aa12.99□□□□□ -0.33
SNX21-211ENST00000486336 DIS3LQ8TF46 1054 aaKnown RBP12.99□□□□□ -0.33
SNX21-211ENST00000486336 DCAF4Q8WV16 495 aa12.99□□□□□ -0.33
SNX21-211ENST00000486336 HOMER2Q9NSB8 354 aa12.99□□□□□ -0.33
SNX21-211ENST00000486336 PARP14Q460N5 1801 aa12.99□□□□□ -0.33
SNX21-211ENST00000486336 RAD50Q92878 1312 aa12.98□□□□□ -0.33
SNX21-211ENST00000486336 FDX1P10109 184 aa12.98□□□□□ -0.33
SNX21-211ENST00000486336 SLC16A2P36021 539 aa12.98□□□□□ -0.33
SNX21-211ENST00000486336 PTH1RQ03431 593 aa12.98□□□□□ -0.33
SNX21-211ENST00000486336 TTBK2Q6IQ55 1244 aa12.98□□□□□ -0.33
SNX21-211ENST00000486336 SKAP1Q86WV1 359 aa12.98□□□□□ -0.33
SNX21-211ENST00000486336 IQCA1Q86XH1 822 aa12.98□□□□□ -0.33
SNX21-211ENST00000486336 ANKRD35Q8N283 1001 aa12.98□□□□□ -0.33
SNX21-211ENST00000486336 MAML3Q96JK9 1138 aa12.98□□□□□ -0.33
SNX21-211ENST00000486336 AGBL1Q96MI9 1066 aa12.98□□□□□ -0.33
SNX21-211ENST00000486336 TTC14Q96N46 770 aa12.98□□□□□ -0.33
SNX21-211ENST00000486336 KRT23Q9C075 422 aa12.98□□□□□ -0.33
SNX21-211ENST00000486336 OGDHLQ9ULD0 1010 aa12.98□□□□□ -0.33
SNX21-211ENST00000486336 PRR12Q9ULL5 1215 aa12.98□□□□□ -0.33
SNX21-211ENST00000486336 ZNFX1Q9P2E3 1918 aaKnown RBP12.98□□□□□ -0.33
SNX21-211ENST00000486336 ATP2A1O14983 1001 aa12.97□□□□□ -0.33
SNX21-211ENST00000486336 PLA2G6O60733 806 aa12.97□□□□□ -0.33
SNX21-211ENST00000486336 MYCNP04198 464 aaPredicted RBP12.97□□□□□ -0.33
SNX21-211ENST00000486336 ALAS1P13196 640 aa12.97□□□□□ -0.33
SNX21-211ENST00000486336 NOVP48745 357 aa12.97□□□□□ -0.33
SNX21-211ENST00000486336 ZNF792Q3KQV3 632 aa12.97□□□□□ -0.33
SNX21-211ENST00000486336 CCDC178Q5BJE1 867 aa12.97□□□□□ -0.33
SNX21-211ENST00000486336 ANO1Q5XXA6 986 aa12.97□□□□□ -0.33
SNX21-211ENST00000486336 UBE2Q1Q7Z7E8 422 aa12.97□□□□□ -0.33
SNX21-211ENST00000486336 ANKLE1Q8NAG6 615 aa12.97□□□□□ -0.33
SNX21-211ENST00000486336 TRPV1Q8NER1 839 aa12.97□□□□□ -0.33
SNX21-211ENST00000486336 CHST13Q8NET6 341 aa12.97□□□□□ -0.33
SNX21-211ENST00000486336 KAT14Q9H8E8 782 aa12.97□□□□□ -0.33
SNX21-211ENST00000486336 DDX20Q9UHI6 824 aaKnown RBP12.97□□□□□ -0.33
SNX21-211ENST00000486336 BRCA2P51587 3418 aa12.97□□□□□ -0.33
SNX21-211ENST00000486336 NEFLP07196 543 aa12.96□□□□□ -0.33
SNX21-211ENST00000486336 CYBAP13498 195 aa12.96□□□□□ -0.33
SNX21-211ENST00000486336 OAZ1P54368 228 aa12.96□□□□□ -0.33
SNX21-211ENST00000486336 TRDNQ13061 729 aa12.96□□□□□ -0.33
SNX21-211ENST00000486336 SYDE2Q5VT97 1194 aa12.96□□□□□ -0.33
SNX21-211ENST00000486336 LHX8Q68G74 356 aa12.96□□□□□ -0.33
SNX21-211ENST00000486336 KIAA1211Q6ZU35 1233 aa12.96□□□□□ -0.33
SNX21-211ENST00000486336 CCDC136Q96JN2 1154 aa12.96□□□□□ -0.33
SNX21-211ENST00000486336 TRERF1Q96PN7 1200 aa12.96□□□□□ -0.33
SNX21-211ENST00000486336 ZSCAN10Q96SZ4 725 aaPredicted RBP12.96□□□□□ -0.33
SNX21-211ENST00000486336 C11orf49Q9H6J7 331 aa12.96□□□□□ -0.33
SNX21-211ENST00000486336 CNNM2Q9H8M5 875 aa12.96□□□□□ -0.33
SNX21-211ENST00000486336 ZSWIM5Q9P217 1185 aa12.96□□□□□ -0.33
SNX21-211ENST00000486336 FBXO40Q9UH90 709 aa12.96□□□□□ -0.33
SNX21-211ENST00000486336 U3KPZ7 1027 aaPredicted RBP12.96□□□□□ -0.33
SNX21-211ENST00000486336 H0YGN5 161 aa12.95□□□□□ -0.34
SNX21-211ENST00000486336 SGSM2O43147 1006 aa12.95□□□□□ -0.34
SNX21-211ENST00000486336 EVI5O60447 810 aa12.95□□□□□ -0.34
SNX21-211ENST00000486336 MSCO60682 206 aa12.95□□□□□ -0.34
SNX21-211ENST00000486336 GOLGA8HP0CJ92 632 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms