RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 BNIP3Q12983 259 aa8.98□□□□□ -0.97
RTN4-214ENST00000486085 NOP9Q86U38 636 aaKnown RBP8.98□□□□□ -0.97
RTN4-214ENST00000486085 DAGLBQ8NCG7 672 aa8.98□□□□□ -0.97
RTN4-214ENST00000486085 BVESQ8NE79 360 aa8.98□□□□□ -0.97
RTN4-214ENST00000486085 TCTN2Q96GX1 697 aa8.98□□□□□ -0.97
RTN4-214ENST00000486085 ZDHHC15Q96MV8 337 aa8.98□□□□□ -0.97
RTN4-214ENST00000486085 BSDC1Q9NW68 430 aaPredicted RBP8.98□□□□□ -0.97
RTN4-214ENST00000486085 VAV3Q9UKW4 847 aa8.98□□□□□ -0.97
RTN4-214ENST00000486085 DIS3Q9Y2L1 958 aaKnown RBP8.98□□□□□ -0.97
RTN4-214ENST00000486085 NACADO15069 1562 aa8.98□□□□□ -0.97
RTN4-214ENST00000486085 DIAPH1O60610 1272 aaKnown RBP8.97□□□□□ -0.97
RTN4-214ENST00000486085 ITGAVP06756 1048 aa8.97□□□□□ -0.97
RTN4-214ENST00000486085 ARHGEF39Q8N4T4 335 aa8.97□□□□□ -0.97
RTN4-214ENST00000486085 ZNF655Q8N720 491 aaPredicted RBP8.97□□□□□ -0.97
RTN4-214ENST00000486085 ASB11Q8WXH4 323 aa8.97□□□□□ -0.97
RTN4-214ENST00000486085 RCC1LQ96I51 464 aaKnown RBP8.97□□□□□ -0.97
RTN4-214ENST00000486085 CGGBP1Q9UFW8 167 aaPredicted RBP8.97□□□□□ -0.97
RTN4-214ENST00000486085 SF3B6Q9Y3B4 125 aaKnown RBP8.97□□□□□ -0.97
RTN4-214ENST00000486085 KDM2BQ8NHM5 1336 aa8.97□□□□□ -0.97
RTN4-214ENST00000486085 H0Y8X5 98 aa8.96□□□□□ -0.98
RTN4-214ENST00000486085 VAMP4O75379 141 aa8.96□□□□□ -0.98
RTN4-214ENST00000486085 CD96P40200 585 aa8.96□□□□□ -0.98
RTN4-214ENST00000486085 CTSKP43235 329 aa8.96□□□□□ -0.98
RTN4-214ENST00000486085 GIMAP6Q6P9H5 292 aa8.96□□□□□ -0.98
RTN4-214ENST00000486085 CREG2Q8IUH2 290 aa8.96□□□□□ -0.98
RTN4-214ENST00000486085 CWC22Q9HCG8 908 aaKnown RBP8.96□□□□□ -0.98
RTN4-214ENST00000486085 DUSP13Q9UII6 198 aa8.96□□□□□ -0.98
RTN4-214ENST00000486085 EMC9Q9Y3B6 208 aa8.96□□□□□ -0.98
RTN4-214ENST00000486085 A0A1W2PQU0 124 aa8.95□□□□□ -0.98
RTN4-214ENST00000486085 IQCA1LA6NCM1 817 aa8.95□□□□□ -0.98
RTN4-214ENST00000486085 KCNH1O95259 989 aa8.95□□□□□ -0.98
RTN4-214ENST00000486085 GSNP06396 782 aa8.95□□□□□ -0.98
RTN4-214ENST00000486085 LTKP29376 864 aa8.95□□□□□ -0.98
RTN4-214ENST00000486085 GAB4Q2WGN9 574 aa8.95□□□□□ -0.98
RTN4-214ENST00000486085 CWF19L1Q69YN2 538 aaKnown RBP8.95□□□□□ -0.98
RTN4-214ENST00000486085 CRTC3Q6UUV7 619 aa8.95□□□□□ -0.98
RTN4-214ENST00000486085 LILRB2Q8N423 598 aa8.95□□□□□ -0.98
RTN4-214ENST00000486085 USHBP1Q8N6Y0 703 aa8.95□□□□□ -0.98
RTN4-214ENST00000486085 BCL7CQ8WUZ0 217 aaPredicted RBP8.95□□□□□ -0.98
RTN4-214ENST00000486085 ZNF669Q96BR6 464 aaPredicted RBP8.95□□□□□ -0.98
RTN4-214ENST00000486085 MISP3Q96FF7 219 aa8.95□□□□□ -0.98
RTN4-214ENST00000486085 SPATA9Q9BWV2 254 aa8.95□□□□□ -0.98
RTN4-214ENST00000486085 SSU72P8A0A1W2PR75 194 aa8.94□□□□□ -0.98
RTN4-214ENST00000486085 TBX1O43435 398 aa8.94□□□□□ -0.98
RTN4-214ENST00000486085 TMPRSS7Q7RTY8 843 aa8.94□□□□□ -0.98
RTN4-214ENST00000486085 ZNF227Q86WZ6 799 aa8.94□□□□□ -0.98
RTN4-214ENST00000486085 MRGPRX3Q96LB0 322 aa8.94□□□□□ -0.98
RTN4-214ENST00000486085 SLC5A6Q9Y289 635 aa8.94□□□□□ -0.98
RTN4-214ENST00000486085 ESR1P03372 595 aa8.93□□□□□ -0.98
RTN4-214ENST00000486085 SYPP08247 313 aa8.93□□□□□ -0.98
RTN4-214ENST00000486085 CD97P48960 835 aa8.93□□□□□ -0.98
RTN4-214ENST00000486085 IKZF1Q13422 519 aa8.93□□□□□ -0.98
RTN4-214ENST00000486085 DPY19L1Q2PZI1 675 aa8.93□□□□□ -0.98
RTN4-214ENST00000486085 POMZP3Q6PJE2 187 aa8.93□□□□□ -0.98
RTN4-214ENST00000486085 DTX1Q86Y01 620 aa8.93□□□□□ -0.98
RTN4-214ENST00000486085 TRIM59Q8IWR1 403 aa8.93□□□□□ -0.98
RTN4-214ENST00000486085 STK11IPQ8N1F8 1099 aa8.93□□□□□ -0.98
RTN4-214ENST00000486085 LRRC47Q8N1G4 583 aaKnown RBP8.93□□□□□ -0.98
RTN4-214ENST00000486085 CRACR2BQ8N4Y2 399 aaPredicted RBP8.93□□□□□ -0.98
RTN4-214ENST00000486085 SGSM3Q96HU1 749 aa8.93□□□□□ -0.98
RTN4-214ENST00000486085 FOXP3Q9BZS1 431 aa8.93□□□□□ -0.98
RTN4-214ENST00000486085 PCDHA11Q9Y5I1 949 aa8.93□□□□□ -0.98
RTN4-214ENST00000486085 CD8BP10966 210 aa8.92□□□□□ -0.98
RTN4-214ENST00000486085 PCBP3P57721 371 aaKnown RBP8.92□□□□□ -0.98
RTN4-214ENST00000486085 PPP2R2AP63151 447 aa8.92□□□□□ -0.98
RTN4-214ENST00000486085 AMPD2Q01433 879 aa8.92□□□□□ -0.98
RTN4-214ENST00000486085 POU4F1Q01851 419 aa8.92□□□□□ -0.98
RTN4-214ENST00000486085 EGR3Q06889 387 aa8.92□□□□□ -0.98
RTN4-214ENST00000486085 ZNF574Q6ZN55 896 aaPredicted RBP8.92□□□□□ -0.98
RTN4-214ENST00000486085 SPRED2Q7Z698 418 aa8.92□□□□□ -0.98
RTN4-214ENST00000486085 BTN2A2Q8WVV5 523 aa8.92□□□□□ -0.98
RTN4-214ENST00000486085 CCDC39Q9UFE4 941 aa8.92□□□□□ -0.98
RTN4-214ENST00000486085 TCFL5Q9UL49 500 aa8.92□□□□□ -0.98
RTN4-214ENST00000486085 LOC105371045A0A1W2PR82 267 aa8.91□□□□□ -0.98
RTN4-214ENST00000486085 FKTNO75072 461 aa8.91□□□□□ -0.98
RTN4-214ENST00000486085 PRNPP04156 253 aa8.91□□□□□ -0.98
RTN4-214ENST00000486085 CD3EP07766 207 aa8.91□□□□□ -0.98
RTN4-214ENST00000486085 FAM153BP0C7A2 387 aa8.91□□□□□ -0.98
RTN4-214ENST00000486085 VAV1P15498 845 aa8.91□□□□□ -0.98
RTN4-214ENST00000486085 SPINK2P20155 84 aa8.91□□□□□ -0.98
RTN4-214ENST00000486085 GRB10Q13322 594 aa8.91□□□□□ -0.98
RTN4-214ENST00000486085 HSP90AA2PQ14568 343 aaPredicted RBP8.91□□□□□ -0.98
RTN4-214ENST00000486085 GTF2IRD2BQ6EKJ0 949 aa8.91□□□□□ -0.98
RTN4-214ENST00000486085 GTF2IRD2Q86UP8 949 aa8.91□□□□□ -0.98
RTN4-214ENST00000486085 JAZF1Q86VZ6 243 aa8.91□□□□□ -0.98
RTN4-214ENST00000486085 GPR55Q9Y2T6 319 aaPredicted RBP8.91□□□□□ -0.98
RTN4-214ENST00000486085 KIAA1324LA8MWY0 1029 aaPredicted RBP8.9□□□□□ -0.98
RTN4-214ENST00000486085 BMP8BP34820 402 aa8.9□□□□□ -0.98
RTN4-214ENST00000486085 GRIA2P42262 883 aa8.9□□□□□ -0.98
RTN4-214ENST00000486085 NOP2P46087 812 aaKnown RBP8.9□□□□□ -0.98
RTN4-214ENST00000486085 ZMYM1Q5SVZ6 1142 aa8.9□□□□□ -0.98
RTN4-214ENST00000486085 RNF111Q6ZNA4 994 aa8.9□□□□□ -0.98
RTN4-214ENST00000486085 VSIG10LQ86VR7 867 aa8.9□□□□□ -0.98
RTN4-214ENST00000486085 LINC00116Q8NCU8 138 aa8.9□□□□□ -0.98
RTN4-214ENST00000486085 FLCNQ8NFG4 579 aa8.9□□□□□ -0.98
RTN4-214ENST00000486085 SH3TC2Q8TF17 1288 aa8.9□□□□□ -0.98
RTN4-214ENST00000486085 THAP3Q8WTV1 239 aaPredicted RBP8.9□□□□□ -0.98
RTN4-214ENST00000486085 MCMBPQ9BTE3 642 aa8.9□□□□□ -0.98
RTN4-214ENST00000486085 KANSL2Q9H9L4 492 aa8.9□□□□□ -0.98
RTN4-214ENST00000486085 CARS2Q9HA77 564 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms