RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 TRIM10Q9UDY6 481 aa25.34■■□□□ 1.65
CLN5-202ENST00000485938 ORC4O43929 436 aa25.33■■□□□ 1.65
CLN5-202ENST00000485938 EVX2Q03828 476 aa25.33■■□□□ 1.65
CLN5-202ENST00000485938 WDR93Q6P2C0 686 aa25.33■■□□□ 1.65
CLN5-202ENST00000485938 ADSSL1Q8N142 457 aa25.33■■□□□ 1.65
CLN5-202ENST00000485938 A0A1B0GUL6 1792 aa25.32■■□□□ 1.64
CLN5-202ENST00000485938 MB21D1Q8N884 522 aa25.32■■□□□ 1.64
CLN5-202ENST00000485938 OR8K1Q8NGG5 319 aa25.32■■□□□ 1.64
CLN5-202ENST00000485938 DNAJC7Q99615 494 aa25.32■■□□□ 1.64
CLN5-202ENST00000485938 GUCA1BQ9UMX6 200 aa25.32■■□□□ 1.64
CLN5-202ENST00000485938 PSMD14O00487 310 aa25.32■■□□□ 1.64
CLN5-202ENST00000485938 TRAPPC11Q7Z392 1133 aa25.32■■□□□ 1.64
CLN5-202ENST00000485938 NIP7Q9Y221 180 aaKnown RBP eCLIP25.32■■□□□ 1.64
CLN5-202ENST00000485938 TRIM49BA6NDI0 452 aa25.31■■□□□ 1.64
CLN5-202ENST00000485938 LGALS16A8MUM7 142 aa25.31■■□□□ 1.64
CLN5-202ENST00000485938 ACTN2P35609 894 aa25.31■■□□□ 1.64
CLN5-202ENST00000485938 STAT6P42226 847 aa25.31■■□□□ 1.64
CLN5-202ENST00000485938 FAN1Q9Y2M0 1017 aa25.31■■□□□ 1.64
CLN5-202ENST00000485938 A0A0U1RQG5 324 aaPredicted RBP25.31■■□□□ 1.64
CLN5-202ENST00000485938 A0A1W2PQC6 194 aa25.31■■□□□ 1.64
CLN5-202ENST00000485938 CRKLP46109 303 aaKnown RBP25.31■■□□□ 1.64
CLN5-202ENST00000485938 ZNF507Q8TCN5 953 aa25.31■■□□□ 1.64
CLN5-202ENST00000485938 FAM47AQ5JRC9 791 aa25.3■■□□□ 1.64
CLN5-202ENST00000485938 HAUS4Q9H6D7 363 aa25.3■■□□□ 1.64
CLN5-202ENST00000485938 LUC7L2Q9Y383 392 aaKnown RBP25.3■■□□□ 1.64
CLN5-202ENST00000485938 SLC20A2Q08357 652 aa25.3■■□□□ 1.64
CLN5-202ENST00000485938 UBE4AQ14139 1066 aa25.3■■□□□ 1.64
CLN5-202ENST00000485938 TSPYL1Q9H0U9 437 aa25.3■■□□□ 1.64
CLN5-202ENST00000485938 DISC1Q9NRI5 854 aa25.3■■□□□ 1.64
CLN5-202ENST00000485938 CWC15Q9P013 229 aaKnown RBP25.3■■□□□ 1.64
CLN5-202ENST00000485938 RREB1Q92766 1687 aa25.29■■□□□ 1.64
CLN5-202ENST00000485938 EXOC5O00471 708 aa25.29■■□□□ 1.64
CLN5-202ENST00000485938 PMS1P54277 932 aaKnown RBP25.29■■□□□ 1.64
CLN5-202ENST00000485938 HERVK_113P62684 666 aa25.29■■□□□ 1.64
CLN5-202ENST00000485938 NAALADL2Q58DX5 795 aa25.29■■□□□ 1.64
CLN5-202ENST00000485938 WDR59Q6PJI9 974 aa25.29■■□□□ 1.64
CLN5-202ENST00000485938 ZBTB9Q96C00 473 aa25.29■■□□□ 1.64
CLN5-202ENST00000485938 CAPN11Q9UMQ6 739 aa25.29■■□□□ 1.64
CLN5-202ENST00000485938 PDS5AQ29RF7 1337 aaKnown RBP25.29■■□□□ 1.64
CLN5-202ENST00000485938 FAM205AQ6ZU69 1335 aa25.29■■□□□ 1.64
CLN5-202ENST00000485938 EEF1GP26641 437 aaKnown RBP25.29■■□□□ 1.64
CLN5-202ENST00000485938 CALML3P27482 149 aa25.29■■□□□ 1.64
CLN5-202ENST00000485938 BLIDQ8IZY5 108 aa25.29■■□□□ 1.64
CLN5-202ENST00000485938 CCDC148Q8NFR7 591 aa25.29■■□□□ 1.64
CLN5-202ENST00000485938 FEZ2Q9UHY8 353 aaPredicted RBP25.29■■□□□ 1.64
CLN5-202ENST00000485938 SCN7AQ01118 1682 aa25.28■■□□□ 1.64
CLN5-202ENST00000485938 LRRIQ3A6PVS8 624 aaPredicted RBP25.28■■□□□ 1.64
CLN5-202ENST00000485938 FAM71BQ8TC56 605 aa25.28■■□□□ 1.64
CLN5-202ENST00000485938 KCNB1Q14721 858 aa25.28■■□□□ 1.64
CLN5-202ENST00000485938 CAVIN4Q5BKX8 364 aa25.28■■□□□ 1.64
CLN5-202ENST00000485938 THAP9Q9H5L6 903 aa25.28■■□□□ 1.64
CLN5-202ENST00000485938 HDAC6Q9UBN7 1215 aa25.28■■□□□ 1.64
CLN5-202ENST00000485938 USP14P54578 494 aa25.27■■□□□ 1.64
CLN5-202ENST00000485938 FAM84BQ96KN1 310 aaPredicted RBP25.27■■□□□ 1.64
CLN5-202ENST00000485938 DCP1AQ9NPI6 582 aaPredicted RBP25.27■■□□□ 1.64
CLN5-202ENST00000485938 ROBO1Q9Y6N7 1651 aa25.27■■□□□ 1.64
CLN5-202ENST00000485938 ENC1O14682 589 aa25.26■■□□□ 1.63
CLN5-202ENST00000485938 KLRC4O43908 158 aa25.26■■□□□ 1.63
CLN5-202ENST00000485938 ANKRD18AQ8IVF6 992 aa25.26■■□□□ 1.63
CLN5-202ENST00000485938 DOT1LQ8TEK3 1739 aa25.26■■□□□ 1.63
CLN5-202ENST00000485938 NSUN4Q96CB9 384 aaKnown RBP25.26■■□□□ 1.63
CLN5-202ENST00000485938 PODXL2Q9NZ53 605 aa25.26■■□□□ 1.63
CLN5-202ENST00000485938 ATP1A1P05023 1023 aaKnown RBP25.26■■□□□ 1.63
CLN5-202ENST00000485938 HSP90B2PQ58FF3 399 aa25.26■■□□□ 1.63
CLN5-202ENST00000485938 PAPD7Q5XG87 772 aaKnown RBP25.26■■□□□ 1.63
CLN5-202ENST00000485938 RCSD1Q6JBY9 416 aa25.26■■□□□ 1.63
CLN5-202ENST00000485938 ZNF662Q6ZS27 426 aa25.26■■□□□ 1.63
CLN5-202ENST00000485938 CCDC102AQ96A19 550 aa25.26■■□□□ 1.63
CLN5-202ENST00000485938 LAMB1P07942 1786 aa25.26■■□□□ 1.63
CLN5-202ENST00000485938 MEA1Q16626 185 aa25.25■■□□□ 1.63
CLN5-202ENST00000485938 CCDC122Q5T0U0 273 aa25.25■■□□□ 1.63
CLN5-202ENST00000485938 ACBD3Q9H3P7 528 aa25.25■■□□□ 1.63
CLN5-202ENST00000485938 MED4Q9NPJ6 270 aa25.25■■□□□ 1.63
CLN5-202ENST00000485938 SH3GLB2Q9NR46 395 aa25.25■■□□□ 1.63
CLN5-202ENST00000485938 PCDHA4Q9UN74 947 aa25.25■■□□□ 1.63
CLN5-202ENST00000485938 TFR2Q9UP52 801 aa25.25■■□□□ 1.63
CLN5-202ENST00000485938 SAR1BQ9Y6B6 198 aa25.25■■□□□ 1.63
CLN5-202ENST00000485938 CYP2D6P10635 497 aa25.25■■□□□ 1.63
CLN5-202ENST00000485938 KIF5BP33176 963 aa25.25■■□□□ 1.63
CLN5-202ENST00000485938 TSR1Q2NL82 804 aaKnown RBP25.25■■□□□ 1.63
CLN5-202ENST00000485938 LEKR1Q6ZMV7 388 aa25.25■■□□□ 1.63
CLN5-202ENST00000485938 MMS19Q96T76 1030 aa25.25■■□□□ 1.63
CLN5-202ENST00000485938 PP2D1A8MPX8 630 aa25.24■■□□□ 1.63
CLN5-202ENST00000485938 RPS6KA5O75582 802 aa25.24■■□□□ 1.63
CLN5-202ENST00000485938 ATP6V1AP38606 617 aa25.24■■□□□ 1.63
CLN5-202ENST00000485938 MECOMQ03112 1051 aa25.24■■□□□ 1.63
CLN5-202ENST00000485938 TTI2Q6NXR4 508 aa25.24■■□□□ 1.63
CLN5-202ENST00000485938 DTHD1Q6ZMT9 781 aa25.24■■□□□ 1.63
CLN5-202ENST00000485938 GPKOWQ92917 476 aaPredicted RBP eCLIP25.24■■□□□ 1.63
CLN5-202ENST00000485938 CRNKL1Q9BZJ0 848 aaKnown RBP25.24■■□□□ 1.63
CLN5-202ENST00000485938 VIPAS39Q9H9C1 493 aa25.24■■□□□ 1.63
CLN5-202ENST00000485938 BSDC1Q9NW68 430 aaPredicted RBP25.24■■□□□ 1.63
CLN5-202ENST00000485938 PES1O00541 588 aaKnown RBP25.24■■□□□ 1.63
CLN5-202ENST00000485938 RHOBTB3O94955 611 aa25.24■■□□□ 1.63
CLN5-202ENST00000485938 DNM2P50570 870 aa25.24■■□□□ 1.63
CLN5-202ENST00000485938 C3orf67Q6ZVT6 689 aa25.24■■□□□ 1.63
CLN5-202ENST00000485938 GIMAP8Q8ND71 665 aaPredicted RBP25.24■■□□□ 1.63
CLN5-202ENST00000485938 RASGRP4Q8TDF6 673 aa25.24■■□□□ 1.63
CLN5-202ENST00000485938 TRIM47Q96LD4 638 aa25.24■■□□□ 1.63
CLN5-202ENST00000485938 LCMT1Q9UIC8 334 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms