RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 ENAHQ8N8S7 591 aaPredicted RBP6.27□□□□□ -1.41
COL17A1-206ENST00000483876 TGFBRAP1Q8WUH2 860 aa6.27□□□□□ -1.41
COL17A1-206ENST00000483876 FOXD4L4Q8WXT5 416 aaPredicted RBP6.27□□□□□ -1.41
COL17A1-206ENST00000483876 FBXL18Q96ME1 805 aa6.27□□□□□ -1.41
COL17A1-206ENST00000483876 ZDHHC15Q96MV8 337 aa6.27□□□□□ -1.41
COL17A1-206ENST00000483876 LBHD1Q9BQE6 289 aaPredicted RBP6.27□□□□□ -1.41
COL17A1-206ENST00000483876 LZTS2Q9BRK4 669 aa6.27□□□□□ -1.41
COL17A1-206ENST00000483876 RNF26Q9BY78 433 aaPredicted RBP6.27□□□□□ -1.41
COL17A1-206ENST00000483876 DHX36Q9H2U1 1008 aaKnown RBP6.27□□□□□ -1.41
COL17A1-206ENST00000483876 MKNK2Q9HBH9 465 aa6.27□□□□□ -1.41
COL17A1-206ENST00000483876 SENP2Q9HC62 589 aa6.27□□□□□ -1.41
COL17A1-206ENST00000483876 TOMM22Q9NS69 142 aa6.27□□□□□ -1.41
COL17A1-206ENST00000483876 RTEL1Q9NZ71 1219 aa6.27□□□□□ -1.41
COL17A1-206ENST00000483876 SERPINA10Q9UK55 444 aa6.27□□□□□ -1.41
COL17A1-206ENST00000483876 NAP1L2Q9ULW6 460 aaPredicted RBP6.27□□□□□ -1.41
COL17A1-206ENST00000483876 CNPY2Q9Y2B0 182 aa6.27□□□□□ -1.41
COL17A1-206ENST00000483876 DAGLAQ9Y4D2 1042 aa6.27□□□□□ -1.41
COL17A1-206ENST00000483876 MYH13Q9UKX3 1938 aa6.27□□□□□ -1.41
COL17A1-206ENST00000483876 MYPNQ86TC9 1320 aa6.26□□□□□ -1.41
COL17A1-206ENST00000483876 MAST2Q6P0Q8 1798 aa6.26□□□□□ -1.41
COL17A1-206ENST00000483876 TSPY2A6NKD2 308 aa6.26□□□□□ -1.41
COL17A1-206ENST00000483876 PRR33A8MZF0 331 aa6.26□□□□□ -1.41
COL17A1-206ENST00000483876 ECE2O60344 883 aa6.26□□□□□ -1.41
COL17A1-206ENST00000483876 TLR2O60603 784 aa6.26□□□□□ -1.41
COL17A1-206ENST00000483876 VIL1P09327 827 aaKnown RBP6.26□□□□□ -1.41
COL17A1-206ENST00000483876 USP17L8P0C7I0 530 aa6.26□□□□□ -1.41
COL17A1-206ENST00000483876 XBP1P17861 261 aa6.26□□□□□ -1.41
COL17A1-206ENST00000483876 OSBPP22059 807 aa6.26□□□□□ -1.41
COL17A1-206ENST00000483876 ITGB8P26012 769 aa6.26□□□□□ -1.41
COL17A1-206ENST00000483876 KIF5BP33176 963 aa6.26□□□□□ -1.41
COL17A1-206ENST00000483876 GJA5P36382 358 aa6.26□□□□□ -1.41
COL17A1-206ENST00000483876 PSMC4P43686 418 aa6.26□□□□□ -1.41
COL17A1-206ENST00000483876 GNAQP50148 359 aa6.26□□□□□ -1.41
COL17A1-206ENST00000483876 TFAP4Q01664 338 aa6.26□□□□□ -1.41
COL17A1-206ENST00000483876 TRIM29Q14134 588 aa6.26□□□□□ -1.41
COL17A1-206ENST00000483876 DOK7Q18PE1 504 aa6.26□□□□□ -1.41
COL17A1-206ENST00000483876 ZSCAN23Q3MJ62 389 aa6.26□□□□□ -1.41
COL17A1-206ENST00000483876 DACT2Q5SW24 774 aa6.26□□□□□ -1.41
COL17A1-206ENST00000483876 RCSD1Q6JBY9 416 aa6.26□□□□□ -1.41
COL17A1-206ENST00000483876 APOBEC3HQ6NTF7 200 aaKnown RBP6.26□□□□□ -1.41
COL17A1-206ENST00000483876 POTEEQ6S8J3 1075 aa6.26□□□□□ -1.41
COL17A1-206ENST00000483876 C16orf86Q6ZW13 317 aa6.26□□□□□ -1.41
COL17A1-206ENST00000483876 ERMP1Q7Z2K6 904 aa6.26□□□□□ -1.41
COL17A1-206ENST00000483876 CERS5Q8N5B7 392 aa6.26□□□□□ -1.41
COL17A1-206ENST00000483876 ANKLE1Q8NAG6 615 aa6.26□□□□□ -1.41
COL17A1-206ENST00000483876 SLAIN1Q8ND83 568 aa6.26□□□□□ -1.41
COL17A1-206ENST00000483876 NEDD1Q8NHV4 660 aa6.26□□□□□ -1.41
COL17A1-206ENST00000483876 LEO1Q8WVC0 666 aaPredicted RBP6.26□□□□□ -1.41
COL17A1-206ENST00000483876 TEKT1Q969V4 418 aa6.26□□□□□ -1.41
COL17A1-206ENST00000483876 SPATA32Q96LK8 384 aa6.26□□□□□ -1.41
COL17A1-206ENST00000483876 ALG1Q9BT22 464 aa6.26□□□□□ -1.41
COL17A1-206ENST00000483876 IDI2Q9BXS1 227 aa6.26□□□□□ -1.41
COL17A1-206ENST00000483876 CRISPLD2Q9H0B8 497 aa6.26□□□□□ -1.41
COL17A1-206ENST00000483876 EHD4Q9H223 541 aa6.26□□□□□ -1.41
COL17A1-206ENST00000483876 FOXP1Q9H334 677 aaPredicted RBP6.26□□□□□ -1.41
COL17A1-206ENST00000483876 C11orf49Q9H6J7 331 aa6.26□□□□□ -1.41
COL17A1-206ENST00000483876 POLR3EQ9NVU0 708 aa6.26□□□□□ -1.41
COL17A1-206ENST00000483876 SWAP70Q9UH65 585 aa6.26□□□□□ -1.41
COL17A1-206ENST00000483876 TTF2Q9UNY4 1162 aaKnown RBP6.26□□□□□ -1.41
COL17A1-206ENST00000483876 MORC2Q9Y6X9 1032 aaPredicted RBP6.26□□□□□ -1.41
COL17A1-206ENST00000483876 BAHCC1Q9P281 2608 aa6.26□□□□□ -1.41
COL17A1-206ENST00000483876 ZFHX4Q86UP3 3567 aa6.25□□□□□ -1.41
COL17A1-206ENST00000483876 CYP2D7A0A087X1C5 515 aa6.25□□□□□ -1.41
COL17A1-206ENST00000483876 A0A1W2PQ27 194 aa6.25□□□□□ -1.41
COL17A1-206ENST00000483876 A0A1W2PQ64 194 aa6.25□□□□□ -1.41
COL17A1-206ENST00000483876 A0A1W2PQD8 194 aa6.25□□□□□ -1.41
COL17A1-206ENST00000483876 GOLGA6L4A6NEF3 574 aa6.25□□□□□ -1.41
COL17A1-206ENST00000483876 GADD45BO75293 160 aaPredicted RBP6.25□□□□□ -1.41
COL17A1-206ENST00000483876 YEATS4O95619 227 aa6.25□□□□□ -1.41
COL17A1-206ENST00000483876 TSPY3P0CV98 308 aa6.25□□□□□ -1.41
COL17A1-206ENST00000483876 TSPY8P0CW00 308 aa6.25□□□□□ -1.41
COL17A1-206ENST00000483876 RASA1P20936 1047 aa6.25□□□□□ -1.41
COL17A1-206ENST00000483876 CTGFP29279 349 aa6.25□□□□□ -1.41
COL17A1-206ENST00000483876 NASPP49321 788 aaPredicted RBP6.25□□□□□ -1.41
COL17A1-206ENST00000483876 CDK8P49336 464 aa6.25□□□□□ -1.41
COL17A1-206ENST00000483876 PLCD1P51178 756 aa6.25□□□□□ -1.41
COL17A1-206ENST00000483876 AKAP17AQ02040 695 aaKnown RBP6.25□□□□□ -1.41
COL17A1-206ENST00000483876 GABPAQ06546 454 aa6.25□□□□□ -1.41
COL17A1-206ENST00000483876 FUT2Q10981 343 aa6.25□□□□□ -1.41
COL17A1-206ENST00000483876 SAFBQ15424 915 aaKnown RBP eCLIP6.25□□□□□ -1.41
COL17A1-206ENST00000483876 NBPF9Q3BBW0 867 aa6.25□□□□□ -1.41
COL17A1-206ENST00000483876 CCDC183Q5T5S1 534 aa6.25□□□□□ -1.41
COL17A1-206ENST00000483876 KRT40Q6A162 431 aa6.25□□□□□ -1.41
COL17A1-206ENST00000483876 CAVIN1Q6NZI2 390 aaKnown RBP6.25□□□□□ -1.41
COL17A1-206ENST00000483876 LRSAM1Q6UWE0 723 aa6.25□□□□□ -1.41
COL17A1-206ENST00000483876 FERMT3Q86UX7 667 aa6.25□□□□□ -1.41
COL17A1-206ENST00000483876 MICU3Q86XE3 530 aa6.25□□□□□ -1.41
COL17A1-206ENST00000483876 FOXP4Q8IVH2 680 aaPredicted RBP6.25□□□□□ -1.41
COL17A1-206ENST00000483876 FAM43AQ8N2R8 423 aa6.25□□□□□ -1.41
COL17A1-206ENST00000483876 AGBL3Q8NEM8 1001 aa6.25□□□□□ -1.41
COL17A1-206ENST00000483876 CTCFLQ8NI51 663 aaPredicted RBP6.25□□□□□ -1.41
COL17A1-206ENST00000483876 KCNG4Q8TDN1 519 aa6.25□□□□□ -1.41
COL17A1-206ENST00000483876 CCDC17Q96LX7 622 aa6.25□□□□□ -1.41
COL17A1-206ENST00000483876 UIMC1Q96RL1 719 aa6.25□□□□□ -1.41
COL17A1-206ENST00000483876 ZKSCAN3Q9BRR0 538 aa6.25□□□□□ -1.41
COL17A1-206ENST00000483876 GZF1Q9H116 711 aaPredicted RBP6.25□□□□□ -1.41
COL17A1-206ENST00000483876 KCNH6Q9H252 994 aa6.25□□□□□ -1.41
COL17A1-206ENST00000483876 KAT14Q9H8E8 782 aa6.25□□□□□ -1.41
COL17A1-206ENST00000483876 PAK6Q9NQU5 681 aaPredicted RBP6.25□□□□□ -1.41
COL17A1-206ENST00000483876 SH3GLB2Q9NR46 395 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms