RNA–Protein interactions for RNA: ENST00000483344.1

FNDC3B-210, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 3

Gene FNDC3B, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-210ENST00000483344 SEMA6BQ9H3T3 888 aa6.52□□□□□ -1.37
FNDC3B-210ENST00000483344 CGGBP1Q9UFW8 167 aaPredicted RBP6.52□□□□□ -1.37
FNDC3B-210ENST00000483344 PLAGL2Q9UPG8 496 aa6.52□□□□□ -1.37
FNDC3B-210ENST00000483344 SF3B6Q9Y3B4 125 aaKnown RBP6.52□□□□□ -1.37
FNDC3B-210ENST00000483344 TMEM265A0A087WTH1 108 aa6.51□□□□□ -1.37
FNDC3B-210ENST00000483344 MEIS1O00470 390 aa6.51□□□□□ -1.37
FNDC3B-210ENST00000483344 HSP90AA2PQ14568 343 aaPredicted RBP6.51□□□□□ -1.37
FNDC3B-210ENST00000483344 PPP2R5DQ14738 602 aa6.51□□□□□ -1.37
FNDC3B-210ENST00000483344 LONRF2Q1L5Z9 754 aa6.51□□□□□ -1.37
FNDC3B-210ENST00000483344 THAP5Q7Z6K1 395 aa6.51□□□□□ -1.37
FNDC3B-210ENST00000483344 PLD6Q8N2A8 252 aaKnown RBP6.51□□□□□ -1.37
FNDC3B-210ENST00000483344 NLGN1Q8N2Q7 840 aa6.51□□□□□ -1.37
FNDC3B-210ENST00000483344 ZNF655Q8N720 491 aaPredicted RBP6.51□□□□□ -1.37
FNDC3B-210ENST00000483344 JMYQ8N9B5 988 aa6.51□□□□□ -1.37
FNDC3B-210ENST00000483344 ZBTB38Q8NAP3 1195 aaPredicted RBP6.51□□□□□ -1.37
FNDC3B-210ENST00000483344 HSPA12BQ96MM6 686 aa6.51□□□□□ -1.37
FNDC3B-210ENST00000483344 ZC3H7BQ9UGR2 993 aaKnown RBP6.51□□□□□ -1.37
FNDC3B-210ENST00000483344 EMC9Q9Y3B6 208 aa6.51□□□□□ -1.37
FNDC3B-210ENST00000483344 SNX11Q9Y5W9 270 aa6.51□□□□□ -1.37
FNDC3B-210ENST00000483344 CADPSQ9ULU8 1353 aa6.5□□□□□ -1.37
FNDC3B-210ENST00000483344 H3BS24 57 aa6.5□□□□□ -1.37
FNDC3B-210ENST00000483344 KCNH1O95259 989 aa6.5□□□□□ -1.37
FNDC3B-210ENST00000483344 TGFB1P01137 390 aa6.5□□□□□ -1.37
FNDC3B-210ENST00000483344 PPP2R2AP63151 447 aa6.5□□□□□ -1.37
FNDC3B-210ENST00000483344 GRB10Q13322 594 aa6.5□□□□□ -1.37
FNDC3B-210ENST00000483344 CWF19L1Q69YN2 538 aaKnown RBP6.5□□□□□ -1.37
FNDC3B-210ENST00000483344 TSPYL5Q86VY4 417 aaPredicted RBP6.5□□□□□ -1.37
FNDC3B-210ENST00000483344 TRIM59Q8IWR1 403 aa6.5□□□□□ -1.37
FNDC3B-210ENST00000483344 MRGPRX3Q96LB0 322 aa6.5□□□□□ -1.37
FNDC3B-210ENST00000483344 ZDHHC15Q96MV8 337 aa6.5□□□□□ -1.37
FNDC3B-210ENST00000483344 LGR4Q9BXB1 951 aa6.5□□□□□ -1.37
FNDC3B-210ENST00000483344 ZSWIM5Q9P217 1185 aa6.5□□□□□ -1.37
FNDC3B-210ENST00000483344 MINPP1Q9UNW1 487 aa6.5□□□□□ -1.37
FNDC3B-210ENST00000483344 H0Y8X5 98 aa6.49□□□□□ -1.37
FNDC3B-210ENST00000483344 ADCY3O60266 1144 aa6.49□□□□□ -1.37
FNDC3B-210ENST00000483344 GSNP06396 782 aa6.49□□□□□ -1.37
FNDC3B-210ENST00000483344 FAM153BP0C7A2 387 aa6.49□□□□□ -1.37
FNDC3B-210ENST00000483344 TPP2P29144 1249 aaPredicted RBP6.49□□□□□ -1.37
FNDC3B-210ENST00000483344 GRIK1P39086 918 aa6.49□□□□□ -1.37
FNDC3B-210ENST00000483344 ZC3H12BQ5HYM0 836 aaKnown RBP6.49□□□□□ -1.37
FNDC3B-210ENST00000483344 FAM177A1Q8N128 213 aaPredicted RBP6.49□□□□□ -1.37
FNDC3B-210ENST00000483344 ZSWIM2Q8NEG5 633 aa6.49□□□□□ -1.37
FNDC3B-210ENST00000483344 UBE2FQ969M7 185 aa6.49□□□□□ -1.37
FNDC3B-210ENST00000483344 SLC26A8Q96RN1 970 aa6.49□□□□□ -1.37
FNDC3B-210ENST00000483344 AARSD1Q9BTE6 412 aaKnown RBP6.49□□□□□ -1.37
FNDC3B-210ENST00000483344 KANSL2Q9H9L4 492 aa6.49□□□□□ -1.37
FNDC3B-210ENST00000483344 ARHGEF4Q9NR80 690 aa6.49□□□□□ -1.37
FNDC3B-210ENST00000483344 PTCH2Q9Y6C5 1203 aa6.49□□□□□ -1.37
FNDC3B-210ENST00000483344 TRAV20A0A0B4J274 112 aa6.48□□□□□ -1.37
FNDC3B-210ENST00000483344 ENPP3O14638 875 aa6.48□□□□□ -1.37
FNDC3B-210ENST00000483344 TBX1O43435 398 aa6.48□□□□□ -1.37
FNDC3B-210ENST00000483344 CANXP27824 592 aaKnown RBP6.48□□□□□ -1.37
FNDC3B-210ENST00000483344 HOXA10P31260 410 aaPredicted RBP6.48□□□□□ -1.37
FNDC3B-210ENST00000483344 CTSKP43235 329 aa6.48□□□□□ -1.37
FNDC3B-210ENST00000483344 AMPD2Q01433 879 aa6.48□□□□□ -1.37
FNDC3B-210ENST00000483344 POU4F1Q01851 419 aa6.48□□□□□ -1.37
FNDC3B-210ENST00000483344 HOMER1Q86YM7 354 aa6.48□□□□□ -1.37
FNDC3B-210ENST00000483344 APPBP2Q92624 585 aa6.48□□□□□ -1.37
FNDC3B-210ENST00000483344 TCTN2Q96GX1 697 aa6.48□□□□□ -1.37
FNDC3B-210ENST00000483344 HRASLS5Q96KN8 279 aa6.48□□□□□ -1.37
FNDC3B-210ENST00000483344 IPO9Q96P70 1041 aaKnown RBP6.48□□□□□ -1.37
FNDC3B-210ENST00000483344 CDC6Q99741 560 aa6.48□□□□□ -1.37
FNDC3B-210ENST00000483344 SEMA3GQ9NS98 782 aa6.48□□□□□ -1.37
FNDC3B-210ENST00000483344 TMEM260Q9NX78 707 aa6.48□□□□□ -1.37
FNDC3B-210ENST00000483344 PITPNM2Q9BZ72 1349 aa6.48□□□□□ -1.37
FNDC3B-210ENST00000483344 ESYT3A0FGR9 886 aa6.47□□□□□ -1.37
FNDC3B-210ENST00000483344 WASH4PA8MWX3 477 aa6.47□□□□□ -1.37
FNDC3B-210ENST00000483344 CDC45O75419 566 aa6.47□□□□□ -1.37
FNDC3B-210ENST00000483344 CLSTN1O94985 981 aa6.47□□□□□ -1.37
FNDC3B-210ENST00000483344 HSD3B2P26439 372 aa6.47□□□□□ -1.37
FNDC3B-210ENST00000483344 BMP8BP34820 402 aa6.47□□□□□ -1.37
FNDC3B-210ENST00000483344 NOP2P46087 812 aaKnown RBP6.47□□□□□ -1.37
FNDC3B-210ENST00000483344 PRKCQQ04759 706 aa6.47□□□□□ -1.37
FNDC3B-210ENST00000483344 SQSTM1Q13501 440 aa6.47□□□□□ -1.37
FNDC3B-210ENST00000483344 GAB4Q2WGN9 574 aa6.47□□□□□ -1.37
FNDC3B-210ENST00000483344 TMEM67Q5HYA8 995 aa6.47□□□□□ -1.37
FNDC3B-210ENST00000483344 GTF2IRD2BQ6EKJ0 949 aa6.47□□□□□ -1.37
FNDC3B-210ENST00000483344 INTS5Q6P9B9 1019 aaKnown RBP6.47□□□□□ -1.37
FNDC3B-210ENST00000483344 CRTC3Q6UUV7 619 aa6.47□□□□□ -1.37
FNDC3B-210ENST00000483344 TMPRSS7Q7RTY8 843 aa6.47□□□□□ -1.37
FNDC3B-210ENST00000483344 GTF2IRD2Q86UP8 949 aa6.47□□□□□ -1.37
FNDC3B-210ENST00000483344 BTN2A2Q8WVV5 523 aa6.47□□□□□ -1.37
FNDC3B-210ENST00000483344 ASB11Q8WXH4 323 aa6.47□□□□□ -1.37
FNDC3B-210ENST00000483344 MISP3Q96FF7 219 aa6.47□□□□□ -1.37
FNDC3B-210ENST00000483344 FANCLQ9NW38 375 aa6.47□□□□□ -1.37
FNDC3B-210ENST00000483344 DUSP13Q9UII6 198 aa6.47□□□□□ -1.37
FNDC3B-210ENST00000483344 GPR55Q9Y2T6 319 aaPredicted RBP6.47□□□□□ -1.37
FNDC3B-210ENST00000483344 CCDC163A0A0D9SF12 145 aa6.46□□□□□ -1.38
FNDC3B-210ENST00000483344 SSU72P8A0A1W2PR75 194 aa6.46□□□□□ -1.38
FNDC3B-210ENST00000483344 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.46□□□□□ -1.38
FNDC3B-210ENST00000483344 VAMP4O75379 141 aa6.46□□□□□ -1.38
FNDC3B-210ENST00000483344 CAPNS1P04632 268 aa6.46□□□□□ -1.38
FNDC3B-210ENST00000483344 FGFR1P11362 822 aa6.46□□□□□ -1.38
FNDC3B-210ENST00000483344 LTKP29376 864 aa6.46□□□□□ -1.38
FNDC3B-210ENST00000483344 HOXC12P31275 282 aa6.46□□□□□ -1.38
FNDC3B-210ENST00000483344 GRIA2P42262 883 aa6.46□□□□□ -1.38
FNDC3B-210ENST00000483344 PCBP3P57721 371 aaKnown RBP6.46□□□□□ -1.38
FNDC3B-210ENST00000483344 AOC3Q16853 763 aa6.46□□□□□ -1.38
FNDC3B-210ENST00000483344 MSMPQ1L6U9 139 aa6.46□□□□□ -1.38
FNDC3B-210ENST00000483344 DPY19L1Q2PZI1 675 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms