RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 PIGSQ96S52 555 aa17.4■□□□□ 0.38
PHGDH-205ENST00000482968 UNCXA6NJT0 531 aa17.39■□□□□ 0.37
PHGDH-205ENST00000482968 WDR46O15213 610 aaKnown RBP17.39■□□□□ 0.37
PHGDH-205ENST00000482968 VCAM1P19320 739 aa17.39■□□□□ 0.37
PHGDH-205ENST00000482968 STAT2P52630 851 aa17.39■□□□□ 0.37
PHGDH-205ENST00000482968 SAMD1Q6SPF0 538 aaPredicted RBP17.39■□□□□ 0.37
PHGDH-205ENST00000482968 JMJD4Q9H9V9 463 aa17.39■□□□□ 0.37
PHGDH-205ENST00000482968 TMOD4Q9NZQ9 345 aa17.39■□□□□ 0.37
PHGDH-205ENST00000482968 TOMM70O94826 608 aa17.38■□□□□ 0.37
PHGDH-205ENST00000482968 PFKFB3Q16875 520 aaPredicted RBP17.38■□□□□ 0.37
PHGDH-205ENST00000482968 ZNF784Q8NCA9 323 aaPredicted RBP17.38■□□□□ 0.37
PHGDH-205ENST00000482968 CHURC1Q8WUH1 139 aa17.38■□□□□ 0.37
PHGDH-205ENST00000482968 RBM27Q9P2N5 1060 aaKnown RBP17.38■□□□□ 0.37
PHGDH-205ENST00000482968 SEC63Q9UGP8 760 aaKnown RBP17.38■□□□□ 0.37
PHGDH-205ENST00000482968 ZDHHC9Q9Y397 364 aa17.38■□□□□ 0.37
PHGDH-205ENST00000482968 PASKQ96RG2 1323 aa17.38■□□□□ 0.37
PHGDH-205ENST00000482968 SCG2P13521 617 aa17.38■□□□□ 0.37
PHGDH-205ENST00000482968 PPIL2Q13356 520 aa17.38■□□□□ 0.37
PHGDH-205ENST00000482968 SYDE2Q5VT97 1194 aa17.38■□□□□ 0.37
PHGDH-205ENST00000482968 BTNL9Q6UXG8 535 aa17.38■□□□□ 0.37
PHGDH-205ENST00000482968 KIFC2Q96AC6 838 aa17.38■□□□□ 0.37
PHGDH-205ENST00000482968 TANGO6Q9C0B7 1094 aa17.38■□□□□ 0.37
PHGDH-205ENST00000482968 RPAP3Q9H6T3 665 aaPredicted RBP17.38■□□□□ 0.37
PHGDH-205ENST00000482968 FBXO28Q9NVF7 368 aa17.38■□□□□ 0.37
PHGDH-205ENST00000482968 FEM1BQ9UK73 627 aa17.38■□□□□ 0.37
PHGDH-205ENST00000482968 MTMR6Q9Y217 621 aa17.38■□□□□ 0.37
PHGDH-205ENST00000482968 SNAP25P60880 206 aa17.37■□□□□ 0.37
PHGDH-205ENST00000482968 TRIM29Q14134 588 aa17.37■□□□□ 0.37
PHGDH-205ENST00000482968 SH3D19Q5HYK7 790 aa17.37■□□□□ 0.37
PHGDH-205ENST00000482968 FBXO18Q8NFZ0 1043 aa17.37■□□□□ 0.37
PHGDH-205ENST00000482968 C12orf42Q96LP6 360 aa17.37■□□□□ 0.37
PHGDH-205ENST00000482968 VPS54Q9P1Q0 977 aa17.37■□□□□ 0.37
PHGDH-205ENST00000482968 PRR12Q9ULL5 1215 aa17.37■□□□□ 0.37
PHGDH-205ENST00000482968 WDR33Q9C0J8 1336 aaKnown RBP17.36■□□□□ 0.37
PHGDH-205ENST00000482968 CXCL11O14625 94 aa17.36■□□□□ 0.37
PHGDH-205ENST00000482968 BRD1O95696 1058 aa17.36■□□□□ 0.37
PHGDH-205ENST00000482968 PDIA4P13667 645 aaKnown RBP17.36■□□□□ 0.37
PHGDH-205ENST00000482968 GJA5P36382 358 aa17.36■□□□□ 0.37
PHGDH-205ENST00000482968 HUNKP57058 714 aa17.36■□□□□ 0.37
PHGDH-205ENST00000482968 FAM160B2Q86V87 743 aa17.36■□□□□ 0.37
PHGDH-205ENST00000482968 GPKOWQ92917 476 aaPredicted RBP eCLIP17.36■□□□□ 0.37
PHGDH-205ENST00000482968 PNMA6FA0A0J9YX94 578 aa17.35■□□□□ 0.37
PHGDH-205ENST00000482968 PLA2G6O60733 806 aa17.35■□□□□ 0.37
PHGDH-205ENST00000482968 ZSCAN22P10073 491 aaPredicted RBP17.35■□□□□ 0.37
PHGDH-205ENST00000482968 XBP1P17861 261 aa17.35■□□□□ 0.37
PHGDH-205ENST00000482968 MKRN3Q13064 507 aaKnown RBP17.35■□□□□ 0.37
PHGDH-205ENST00000482968 KRT40Q6A162 431 aa17.35■□□□□ 0.37
PHGDH-205ENST00000482968 GADL1Q6ZQY3 521 aa17.35■□□□□ 0.37
PHGDH-205ENST00000482968 HEATR3Q7Z4Q2 680 aa17.35■□□□□ 0.37
PHGDH-205ENST00000482968 MTMR8Q96EF0 704 aa17.35■□□□□ 0.37
PHGDH-205ENST00000482968 KCNJ14Q9UNX9 436 aa17.35■□□□□ 0.37
PHGDH-205ENST00000482968 KCNH4Q9UQ05 1017 aa17.35■□□□□ 0.37
PHGDH-205ENST00000482968 PTPRFP10586 1907 aa17.35■□□□□ 0.37
PHGDH-205ENST00000482968 A0A0G2JLL6 359 aaPredicted RBP17.35■□□□□ 0.37
PHGDH-205ENST00000482968 ZBTB5O15062 677 aa17.35■□□□□ 0.37
PHGDH-205ENST00000482968 FLOT1O75955 427 aa17.35■□□□□ 0.37
PHGDH-205ENST00000482968 WWC2Q6AWC2 1192 aa17.35■□□□□ 0.37
PHGDH-205ENST00000482968 MCTP1Q6DN14 999 aa17.35■□□□□ 0.37
PHGDH-205ENST00000482968 PRRT2Q7Z6L0 340 aaPredicted RBP17.35■□□□□ 0.37
PHGDH-205ENST00000482968 FERMT3Q86UX7 667 aa17.35■□□□□ 0.37
PHGDH-205ENST00000482968 PRPF38AQ8NAV1 312 aaKnown RBP17.35■□□□□ 0.37
PHGDH-205ENST00000482968 SHISA4Q96DD7 197 aa17.35■□□□□ 0.37
PHGDH-205ENST00000482968 CDC37Q16543 378 aaPredicted RBP17.34■□□□□ 0.37
PHGDH-205ENST00000482968 QRICH1Q2TAL8 776 aa17.34■□□□□ 0.37
PHGDH-205ENST00000482968 WNK4Q96J92 1243 aa17.34■□□□□ 0.37
PHGDH-205ENST00000482968 SLF1Q9BQI6 1058 aa17.34■□□□□ 0.37
PHGDH-205ENST00000482968 TREML2Q5T2D2 321 aa17.33■□□□□ 0.37
PHGDH-205ENST00000482968 SAPCD2Q86UD0 394 aa17.33■□□□□ 0.37
PHGDH-205ENST00000482968 COA7Q96BR5 231 aa17.33■□□□□ 0.37
PHGDH-205ENST00000482968 BARHL2Q9NY43 387 aa17.33■□□□□ 0.37
PHGDH-205ENST00000482968 USP17L15C9J2P7 530 aa17.33■□□□□ 0.36
PHGDH-205ENST00000482968 USP17L13C9JLJ4 530 aa17.33■□□□□ 0.36
PHGDH-205ENST00000482968 USP17L11C9JVI0 530 aa17.33■□□□□ 0.36
PHGDH-205ENST00000482968 USP17L18D6R9N7 530 aa17.33■□□□□ 0.36
PHGDH-205ENST00000482968 USP17L22D6RA61 530 aa17.33■□□□□ 0.36
PHGDH-205ENST00000482968 USP17L17D6RBQ6 530 aa17.33■□□□□ 0.36
PHGDH-205ENST00000482968 USP17L19D6RCP7 530 aa17.33■□□□□ 0.36
PHGDH-205ENST00000482968 USP17L20D6RJB6 530 aa17.33■□□□□ 0.36
PHGDH-205ENST00000482968 PPP1R11O60927 126 aaPredicted RBP17.33■□□□□ 0.36
PHGDH-205ENST00000482968 NLRP5P59047 1200 aa17.33■□□□□ 0.36
PHGDH-205ENST00000482968 USP17L24Q0WX57 530 aa17.33■□□□□ 0.36
PHGDH-205ENST00000482968 SNAPC2Q13487 334 aa17.33■□□□□ 0.36
PHGDH-205ENST00000482968 TYW1BQ6NUM6 668 aa17.33■□□□□ 0.36
PHGDH-205ENST00000482968 CATSPERGQ6ZRH7 1159 aa17.33■□□□□ 0.36
PHGDH-205ENST00000482968 PROCA1Q8NCQ7 364 aaPredicted RBP17.33■□□□□ 0.36
PHGDH-205ENST00000482968 STXBP3O00186 592 aa17.32■□□□□ 0.36
PHGDH-205ENST00000482968 F13A1P00488 732 aa17.32■□□□□ 0.36
PHGDH-205ENST00000482968 MMP1P03956 469 aa17.32■□□□□ 0.36
PHGDH-205ENST00000482968 ZNF157P51786 506 aaPredicted RBP17.32■□□□□ 0.36
PHGDH-205ENST00000482968 NAPAP54920 295 aa17.32■□□□□ 0.36
PHGDH-205ENST00000482968 COG2Q14746 738 aa17.32■□□□□ 0.36
PHGDH-205ENST00000482968 FOXD4L6Q3SYB3 417 aaPredicted RBP17.32■□□□□ 0.36
PHGDH-205ENST00000482968 CCDC174Q6PII3 467 aa17.32■□□□□ 0.36
PHGDH-205ENST00000482968 FOXD4L3Q6VB84 417 aaPredicted RBP17.32■□□□□ 0.36
PHGDH-205ENST00000482968 FASTKD5Q7L8L6 764 aaKnown RBP17.32■□□□□ 0.36
PHGDH-205ENST00000482968 TNPO1Q92973 898 aaKnown RBP17.32■□□□□ 0.36
PHGDH-205ENST00000482968 PHF20Q9BVI0 1012 aa17.32■□□□□ 0.36
PHGDH-205ENST00000482968 SH3GLB2Q9NR46 395 aa17.32■□□□□ 0.36
PHGDH-205ENST00000482968 PPP1R9AQ9ULJ8 1098 aa17.32■□□□□ 0.36
PHGDH-205ENST00000482968 SPRYD7Q5W111 196 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms