RNA–Protein interactions for RNA: ENST00000482270.5

LIMK2-209, Transcript of LIM domain kinase 2, humanhuman

TSL 2

Gene LIMK2, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-209ENST00000482270 TRPM4Q8TD43 1214 aa11.32□□□□□ -0.6
LIMK2-209ENST00000482270 DBNDD1Q9H9R9 158 aa11.32□□□□□ -0.6
LIMK2-209ENST00000482270 KANSL3Q9P2N6 904 aa11.32□□□□□ -0.6
LIMK2-209ENST00000482270 POLLQ9UGP5 575 aa11.32□□□□□ -0.6
LIMK2-209ENST00000482270 CDHR2Q9BYE9 1310 aa11.32□□□□□ -0.6
LIMK2-209ENST00000482270 SHTN1A0MZ66 631 aa11.31□□□□□ -0.6
LIMK2-209ENST00000482270 F6X3S4 739 aa11.31□□□□□ -0.6
LIMK2-209ENST00000482270 ICMTO60725 284 aa11.31□□□□□ -0.6
LIMK2-209ENST00000482270 MZF1P28698 734 aaPredicted RBP11.31□□□□□ -0.6
LIMK2-209ENST00000482270 CTSWP56202 376 aa11.31□□□□□ -0.6
LIMK2-209ENST00000482270 FMR1Q06787 632 aaKnown RBP eCLIP11.31□□□□□ -0.6
LIMK2-209ENST00000482270 CIAPIN1Q6FI81 312 aa11.31□□□□□ -0.6
LIMK2-209ENST00000482270 PNMA8AQ86V59 439 aaPredicted RBP11.31□□□□□ -0.6
LIMK2-209ENST00000482270 DNAAF4Q8WXU2 420 aa11.31□□□□□ -0.6
LIMK2-209ENST00000482270 SMG9Q9H0W8 520 aaKnown RBP11.31□□□□□ -0.6
LIMK2-209ENST00000482270 VPS33BQ9H267 617 aa11.31□□□□□ -0.6
LIMK2-209ENST00000482270 MYH16Q9H6N6 1097 aa11.31□□□□□ -0.6
LIMK2-209ENST00000482270 C11orf16Q9NQ32 467 aa11.31□□□□□ -0.6
LIMK2-209ENST00000482270 PASKQ96RG2 1323 aa11.31□□□□□ -0.6
LIMK2-209ENST00000482270 E9PSI1 815 aa11.3□□□□□ -0.6
LIMK2-209ENST00000482270 UFL1O94874 794 aa11.3□□□□□ -0.6
LIMK2-209ENST00000482270 HSP90B1P14625 803 aaKnown RBP11.3□□□□□ -0.6
LIMK2-209ENST00000482270 NRLP54845 237 aa11.3□□□□□ -0.6
LIMK2-209ENST00000482270 GCKRQ14397 625 aa11.3□□□□□ -0.6
LIMK2-209ENST00000482270 C20orf204Q6ZNR8 217 aa11.3□□□□□ -0.6
LIMK2-209ENST00000482270 ANKRD18AQ8IVF6 992 aa11.3□□□□□ -0.6
LIMK2-209ENST00000482270 CNTROBQ8N137 903 aa11.3□□□□□ -0.6
LIMK2-209ENST00000482270 TBC1D16Q8TBP0 767 aa11.3□□□□□ -0.6
LIMK2-209ENST00000482270 LPIN3Q9BQK8 851 aa11.3□□□□□ -0.6
LIMK2-209ENST00000482270 BCL2L13Q9BXK5 485 aa11.3□□□□□ -0.6
LIMK2-209ENST00000482270 GREM2Q9H772 168 aa11.3□□□□□ -0.6
LIMK2-209ENST00000482270 ELP3Q9H9T3 547 aa11.3□□□□□ -0.6
LIMK2-209ENST00000482270 KCNQ5Q9NR82 932 aa11.3□□□□□ -0.6
LIMK2-209ENST00000482270 ABI2Q9NYB9 513 aaPredicted RBP11.3□□□□□ -0.6
LIMK2-209ENST00000482270 GPRC5DQ9NZD1 345 aa11.3□□□□□ -0.6
LIMK2-209ENST00000482270 ZNF521Q96K83 1311 aa11.3□□□□□ -0.6
LIMK2-209ENST00000482270 WTIPA6NIX2 430 aaPredicted RBP11.29□□□□□ -0.6
LIMK2-209ENST00000482270 PIK3R2O00459 728 aa11.29□□□□□ -0.6
LIMK2-209ENST00000482270 ECE2O60344 883 aa11.29□□□□□ -0.6
LIMK2-209ENST00000482270 FZD6O60353 706 aa11.29□□□□□ -0.6
LIMK2-209ENST00000482270 GHRHP01286 108 aa11.29□□□□□ -0.6
LIMK2-209ENST00000482270 PCSK7Q16549 785 aa11.29□□□□□ -0.6
LIMK2-209ENST00000482270 COL13A1Q5TAT6 717 aaPredicted RBP11.29□□□□□ -0.6
LIMK2-209ENST00000482270 TTLL11Q8NHH1 800 aa11.29□□□□□ -0.6
LIMK2-209ENST00000482270 RTL9Q8NET4 1388 aa11.28□□□□□ -0.6
LIMK2-209ENST00000482270 TRAF5O00463 557 aa11.28□□□□□ -0.6
LIMK2-209ENST00000482270 PSMD14O00487 310 aa11.28□□□□□ -0.6
LIMK2-209ENST00000482270 TNIP1Q15025 636 aa11.28□□□□□ -0.6
LIMK2-209ENST00000482270 JMYQ8N9B5 988 aa11.28□□□□□ -0.6
LIMK2-209ENST00000482270 EYA3Q99504 573 aa11.28□□□□□ -0.6
LIMK2-209ENST00000482270 NOP53Q9NZM5 478 aaKnown RBP11.28□□□□□ -0.6
LIMK2-209ENST00000482270 EGFL7Q9UHF1 273 aa11.28□□□□□ -0.6
LIMK2-209ENST00000482270 NID1P14543 1247 aa11.27□□□□□ -0.61
LIMK2-209ENST00000482270 CASP7P55210 303 aa11.27□□□□□ -0.61
LIMK2-209ENST00000482270 GDF6Q6KF10 455 aaPredicted RBP11.27□□□□□ -0.61
LIMK2-209ENST00000482270 USP50Q70EL3 339 aaPredicted RBP11.27□□□□□ -0.61
LIMK2-209ENST00000482270 LINS1Q8NG48 757 aa11.27□□□□□ -0.61
LIMK2-209ENST00000482270 OR13H1Q8NG92 308 aa11.27□□□□□ -0.61
LIMK2-209ENST00000482270 CDC5LQ99459 802 aaKnown RBP11.27□□□□□ -0.61
LIMK2-209ENST00000482270 ADARB2Q9NS39 739 aaKnown RBP11.27□□□□□ -0.61
LIMK2-209ENST00000482270 CNTN3Q9P232 1028 aa11.27□□□□□ -0.61
LIMK2-209ENST00000482270 XDHP47989 1333 aa11.27□□□□□ -0.61
LIMK2-209ENST00000482270 NPR3P17342 541 aa11.26□□□□□ -0.61
LIMK2-209ENST00000482270 AFF1P51825 1210 aaKnown RBP11.26□□□□□ -0.61
LIMK2-209ENST00000482270 SLFN5Q08AF3 891 aa11.26□□□□□ -0.61
LIMK2-209ENST00000482270 BEND3Q5T5X7 828 aa11.26□□□□□ -0.61
LIMK2-209ENST00000482270 PDE12Q6L8Q7 609 aaKnown RBP11.26□□□□□ -0.61
LIMK2-209ENST00000482270 SLC4A10Q6U841 1118 aa11.26□□□□□ -0.61
LIMK2-209ENST00000482270 PLD4Q96BZ4 506 aa11.26□□□□□ -0.61
LIMK2-209ENST00000482270 ZC3H12CQ9C0D7 883 aaKnown RBP11.26□□□□□ -0.61
LIMK2-209ENST00000482270 PODXL2Q9NZ53 605 aa11.26□□□□□ -0.61
LIMK2-209ENST00000482270 BIN2Q9UBW5 565 aaPredicted RBP11.26□□□□□ -0.61
LIMK2-209ENST00000482270 CNOT7Q9UIV1 285 aaKnown RBP11.26□□□□□ -0.61
LIMK2-209ENST00000482270 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.26□□□□□ -0.61
LIMK2-209ENST00000482270 CNTNAP1P78357 1384 aa11.26□□□□□ -0.61
LIMK2-209ENST00000482270 BRD1O95696 1058 aa11.25□□□□□ -0.61
LIMK2-209ENST00000482270 ATP11AP98196 1134 aa11.25□□□□□ -0.61
LIMK2-209ENST00000482270 COL9A3Q14050 684 aaPredicted RBP11.25□□□□□ -0.61
LIMK2-209ENST00000482270 TBC1D10BQ4KMP7 808 aaPredicted RBP11.25□□□□□ -0.61
LIMK2-209ENST00000482270 GPAT2Q6NUI2 795 aa11.25□□□□□ -0.61
LIMK2-209ENST00000482270 NCAPG2Q86XI2 1143 aa11.25□□□□□ -0.61
LIMK2-209ENST00000482270 C1orf127Q8N9H9 656 aa11.25□□□□□ -0.61
LIMK2-209ENST00000482270 GLIS2Q9BZE0 524 aaPredicted RBP11.25□□□□□ -0.61
LIMK2-209ENST00000482270 RBSNQ9H1K0 784 aa11.25□□□□□ -0.61
LIMK2-209ENST00000482270 BRPF3Q9ULD4 1205 aa11.25□□□□□ -0.61
LIMK2-209ENST00000482270 ABT1Q9ULW3 272 aaKnown RBP11.25□□□□□ -0.61
LIMK2-209ENST00000482270 MINPP1Q9UNW1 487 aa11.25□□□□□ -0.61
LIMK2-209ENST00000482270 KRBA1A5PL33 1030 aa11.24□□□□□ -0.61
LIMK2-209ENST00000482270 H7C1D1 291 aa11.24□□□□□ -0.61
LIMK2-209ENST00000482270 RPLP1P05386 114 aaKnown RBP11.24□□□□□ -0.61
LIMK2-209ENST00000482270 HSPA1AP0DMV8 641 aaKnown RBP11.24□□□□□ -0.61
LIMK2-209ENST00000482270 HSPA1BP0DMV9 641 aaKnown RBP11.24□□□□□ -0.61
LIMK2-209ENST00000482270 KLRK1P26718 216 aa11.24□□□□□ -0.61
LIMK2-209ENST00000482270 SOX18P35713 384 aa11.24□□□□□ -0.61
LIMK2-209ENST00000482270 IGHMBP2P38935 993 aaKnown RBP11.24□□□□□ -0.61
LIMK2-209ENST00000482270 HYAL2Q12891 473 aa11.24□□□□□ -0.61
LIMK2-209ENST00000482270 EPHA10Q5JZY3 1008 aa11.24□□□□□ -0.61
LIMK2-209ENST00000482270 DLK2Q6UY11 383 aa11.24□□□□□ -0.61
LIMK2-209ENST00000482270 DMRTC2Q8IXT2 367 aaPredicted RBP11.24□□□□□ -0.61
LIMK2-209ENST00000482270 SPACA7Q96KW9 195 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms