RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 INAVAQ3KP66 663 aa9.63□□□□□ -0.87
LSM5-210ENST00000480956 FAM180BQ6P0A1 224 aa9.63□□□□□ -0.87
LSM5-210ENST00000480956 FGD2Q7Z6J4 655 aa9.63□□□□□ -0.87
LSM5-210ENST00000480956 SLC41A1Q8IVJ1 513 aa9.63□□□□□ -0.87
LSM5-210ENST00000480956 FAM43AQ8N2R8 423 aa9.63□□□□□ -0.87
LSM5-210ENST00000480956 KLHL6Q8WZ60 621 aa9.63□□□□□ -0.87
LSM5-210ENST00000480956 GCC1Q96CN9 775 aa9.63□□□□□ -0.87
LSM5-210ENST00000480956 KLRG1Q96E93 195 aa9.63□□□□□ -0.87
LSM5-210ENST00000480956 PAWRQ96IZ0 340 aaKnown RBP9.63□□□□□ -0.87
LSM5-210ENST00000480956 ISCA1Q9BUE6 129 aa9.63□□□□□ -0.87
LSM5-210ENST00000480956 SMC4Q9NTJ3 1288 aa9.63□□□□□ -0.87
LSM5-210ENST00000480956 CYP8B1Q9UNU6 501 aa9.63□□□□□ -0.87
LSM5-210ENST00000480956 LRRFIP2Q9Y608 721 aaKnown RBP9.63□□□□□ -0.87
LSM5-210ENST00000480956 PHF20L1A8MW92 1017 aa9.62□□□□□ -0.87
LSM5-210ENST00000480956 FZD9O00144 591 aa9.62□□□□□ -0.87
LSM5-210ENST00000480956 MBD4O95243 580 aa9.62□□□□□ -0.87
LSM5-210ENST00000480956 IL33O95760 270 aa9.62□□□□□ -0.87
LSM5-210ENST00000480956 CHKAP35790 457 aa9.62□□□□□ -0.87
LSM5-210ENST00000480956 GRM5P41594 1212 aa9.62□□□□□ -0.87
LSM5-210ENST00000480956 PLA2G4AP47712 749 aa9.62□□□□□ -0.87
LSM5-210ENST00000480956 GRIA4P48058 902 aa9.62□□□□□ -0.87
LSM5-210ENST00000480956 SART3Q15020 963 aaKnown RBP9.62□□□□□ -0.87
LSM5-210ENST00000480956 UBE2R2Q712K3 238 aaPredicted RBP9.62□□□□□ -0.87
LSM5-210ENST00000480956 EHBP1Q8NDI1 1231 aa9.62□□□□□ -0.87
LSM5-210ENST00000480956 SGCZQ96LD1 299 aa9.62□□□□□ -0.87
LSM5-210ENST00000480956 CCDC138Q96M89 665 aa9.62□□□□□ -0.87
LSM5-210ENST00000480956 CDK15Q96Q40 435 aa9.62□□□□□ -0.87
LSM5-210ENST00000480956 SLC52A2Q9HAB3 445 aa9.62□□□□□ -0.87
LSM5-210ENST00000480956 RRN3Q9NYV6 651 aa9.62□□□□□ -0.87
LSM5-210ENST00000480956 GPC6Q9Y625 555 aaPredicted RBP9.62□□□□□ -0.87
LSM5-210ENST00000480956 GFRA3O60609 400 aa9.62□□□□□ -0.87
LSM5-210ENST00000480956 PPP2R2AP63151 447 aa9.62□□□□□ -0.87
LSM5-210ENST00000480956 RASIP1Q5U651 963 aa9.62□□□□□ -0.87
LSM5-210ENST00000480956 SAPCD2Q86UD0 394 aa9.62□□□□□ -0.87
LSM5-210ENST00000480956 CMTR2Q8IYT2 770 aaKnown RBP9.62□□□□□ -0.87
LSM5-210ENST00000480956 RPGRQ92834 1020 aaKnown RBP9.62□□□□□ -0.87
LSM5-210ENST00000480956 NLRP3Q96P20 1036 aa9.62□□□□□ -0.87
LSM5-210ENST00000480956 TRERF1Q96PN7 1200 aa9.62□□□□□ -0.87
LSM5-210ENST00000480956 KMT5AQ9NQR1 393 aa9.62□□□□□ -0.87
LSM5-210ENST00000480956 SH3GLB2Q9NR46 395 aa9.62□□□□□ -0.87
LSM5-210ENST00000480956 ITIH6Q6UXX5 1313 aa9.61□□□□□ -0.87
LSM5-210ENST00000480956 CTNND1O60716 968 aaKnown RBP9.61□□□□□ -0.87
LSM5-210ENST00000480956 EFCAB14O75071 495 aa9.61□□□□□ -0.87
LSM5-210ENST00000480956 EGFRP00533 1210 aa9.61□□□□□ -0.87
LSM5-210ENST00000480956 FAM200BP0CF97 657 aa9.61□□□□□ -0.87
LSM5-210ENST00000480956 ACRP10323 421 aa9.61□□□□□ -0.87
LSM5-210ENST00000480956 SMPD1P17405 629 aa9.61□□□□□ -0.87
LSM5-210ENST00000480956 TM4SF4P48230 202 aa9.61□□□□□ -0.87
LSM5-210ENST00000480956 ERVK-21P61565 698 aa9.61□□□□□ -0.87
LSM5-210ENST00000480956 AIDAQ96BJ3 306 aa9.61□□□□□ -0.87
LSM5-210ENST00000480956 ZKSCAN3Q9BRR0 538 aa9.61□□□□□ -0.87
LSM5-210ENST00000480956 TMEM39AQ9NV64 488 aa9.61□□□□□ -0.87
LSM5-210ENST00000480956 LRP2BPQ9P2M1 347 aa9.61□□□□□ -0.87
LSM5-210ENST00000480956 A0A1B0GVC2 190 aa9.6□□□□□ -0.87
LSM5-210ENST00000480956 FAM170AA1A519 330 aa9.6□□□□□ -0.87
LSM5-210ENST00000480956 NCAM1P13591 858 aa9.6□□□□□ -0.87
LSM5-210ENST00000480956 NRLP54845 237 aa9.6□□□□□ -0.87
LSM5-210ENST00000480956 PRKG2Q13237 762 aa9.6□□□□□ -0.87
LSM5-210ENST00000480956 KLF1Q13351 362 aaPredicted RBP9.6□□□□□ -0.87
LSM5-210ENST00000480956 LAMC2Q13753 1193 aa9.6□□□□□ -0.87
LSM5-210ENST00000480956 RGL3Q3MIN7 710 aa9.6□□□□□ -0.87
LSM5-210ENST00000480956 PLA2G4EQ3MJ16 856 aa9.6□□□□□ -0.87
LSM5-210ENST00000480956 GNPTABQ3T906 1256 aa9.6□□□□□ -0.87
LSM5-210ENST00000480956 INTS3Q68E01 1043 aaKnown RBP9.6□□□□□ -0.87
LSM5-210ENST00000480956 CDCA2Q69YH5 1023 aaPredicted RBP9.6□□□□□ -0.87
LSM5-210ENST00000480956 NSMFQ6X4W1 530 aa9.6□□□□□ -0.87
LSM5-210ENST00000480956 OSMRQ99650 979 aa9.6□□□□□ -0.87
LSM5-210ENST00000480956 CENPOQ9BU64 300 aa9.6□□□□□ -0.87
LSM5-210ENST00000480956 PGPEP1Q9NXJ5 209 aa9.6□□□□□ -0.87
LSM5-210ENST00000480956 ACAD8Q9UKU7 415 aa9.6□□□□□ -0.87
LSM5-210ENST00000480956 TPCN1Q9ULQ1 816 aa9.6□□□□□ -0.87
LSM5-210ENST00000480956 DNM3Q9UQ16 869 aa9.6□□□□□ -0.87
LSM5-210ENST00000480956 TPP1O14773 563 aa9.59□□□□□ -0.87
LSM5-210ENST00000480956 ADH1AP07327 375 aa9.59□□□□□ -0.87
LSM5-210ENST00000480956 FGFR1P11362 822 aa9.59□□□□□ -0.87
LSM5-210ENST00000480956 PABPC1P11940 636 aaKnown RBP9.59□□□□□ -0.87
LSM5-210ENST00000480956 IL2P60568 153 aa9.59□□□□□ -0.87
LSM5-210ENST00000480956 FAAP100Q0VG06 881 aa9.59□□□□□ -0.87
LSM5-210ENST00000480956 FAPQ12884 760 aa9.59□□□□□ -0.87
LSM5-210ENST00000480956 SKOR2Q2VWA4 1001 aaPredicted RBP9.59□□□□□ -0.87
LSM5-210ENST00000480956 RPS26P11Q5JNZ5 115 aaPredicted RBP9.59□□□□□ -0.87
LSM5-210ENST00000480956 IFIT1BQ5T764 474 aaKnown RBP9.59□□□□□ -0.87
LSM5-210ENST00000480956 INTS11Q5TA45 600 aaKnown RBP9.59□□□□□ -0.87
LSM5-210ENST00000480956 FAAH2Q6GMR7 532 aa9.59□□□□□ -0.87
LSM5-210ENST00000480956 SRGAP1Q7Z6B7 1085 aa9.59□□□□□ -0.87
LSM5-210ENST00000480956 GSTCDQ8NEC7 633 aa9.59□□□□□ -0.87
LSM5-210ENST00000480956 SLC35G2Q8TBE7 412 aa9.59□□□□□ -0.87
LSM5-210ENST00000480956 MYLK2Q9H1R3 596 aa9.59□□□□□ -0.87
LSM5-210ENST00000480956 RSAD1Q9HA92 442 aa9.59□□□□□ -0.87
LSM5-210ENST00000480956 ZDHHC3Q9NYG2 299 aa9.59□□□□□ -0.87
LSM5-210ENST00000480956 MRFAP1Q9Y605 127 aa9.59□□□□□ -0.87
LSM5-210ENST00000480956 TRIM75PA6NK02 468 aa9.59□□□□□ -0.87
LSM5-210ENST00000480956 MEN1O00255 615 aa9.59□□□□□ -0.87
LSM5-210ENST00000480956 PRODHO43272 600 aa9.59□□□□□ -0.87
LSM5-210ENST00000480956 IFIT1P09914 478 aaKnown RBP9.59□□□□□ -0.87
LSM5-210ENST00000480956 NAT2P11245 290 aa9.59□□□□□ -0.87
LSM5-210ENST00000480956 CAPN3P20807 821 aa9.59□□□□□ -0.87
LSM5-210ENST00000480956 GRNP28799 593 aaKnown RBP9.59□□□□□ -0.87
LSM5-210ENST00000480956 BTKQ06187 659 aa9.59□□□□□ -0.87
LSM5-210ENST00000480956 PPP2R3AQ06190 1150 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms