RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 KLF4O43474 513 aa8.21□□□□□ -1.1
CALD1-219ENST00000480638 STK10O94804 968 aaKnown RBP8.21□□□□□ -1.1
CALD1-219ENST00000480638 GSNP06396 782 aa8.21□□□□□ -1.1
CALD1-219ENST00000480638 ATP2B1P20020 1258 aa8.21□□□□□ -1.1
CALD1-219ENST00000480638 GDNFP39905 211 aa8.21□□□□□ -1.1
CALD1-219ENST00000480638 FXNQ16595 210 aa8.21□□□□□ -1.1
CALD1-219ENST00000480638 ATG4DQ86TL0 474 aaPredicted RBP8.21□□□□□ -1.1
CALD1-219ENST00000480638 MICAL1Q8TDZ2 1067 aa8.21□□□□□ -1.1
CALD1-219ENST00000480638 FGD4Q96M96 766 aa8.21□□□□□ -1.1
CALD1-219ENST00000480638 R3HCC1Q9Y3T6 440 aaKnown RBP8.21□□□□□ -1.1
CALD1-219ENST00000480638 A0A087WZG4 1122 aa8.2□□□□□ -1.1
CALD1-219ENST00000480638 TMEM82A0PJX8 343 aa8.2□□□□□ -1.1
CALD1-219ENST00000480638 ANKRD34BA5PLL1 514 aa8.2□□□□□ -1.1
CALD1-219ENST00000480638 FKTNO75072 461 aa8.2□□□□□ -1.1
CALD1-219ENST00000480638 ZNF205O95201 554 aa8.2□□□□□ -1.1
CALD1-219ENST00000480638 PAPLNO95428 1278 aa8.2□□□□□ -1.1
CALD1-219ENST00000480638 ZGLP1P0C6A0 271 aa8.2□□□□□ -1.1
CALD1-219ENST00000480638 TAL1P17542 331 aaPredicted RBP8.2□□□□□ -1.1
CALD1-219ENST00000480638 ITGB5P18084 799 aa8.2□□□□□ -1.1
CALD1-219ENST00000480638 MCTP1Q6DN14 999 aa8.2□□□□□ -1.1
CALD1-219ENST00000480638 ADAT2Q7Z6V5 191 aaKnown RBP8.2□□□□□ -1.1
CALD1-219ENST00000480638 CELF2-AS1Q8N7Q2 184 aa8.2□□□□□ -1.1
CALD1-219ENST00000480638 ADCY4Q8NFM4 1077 aa8.2□□□□□ -1.1
CALD1-219ENST00000480638 SYTL4Q96C24 671 aaPredicted RBP8.2□□□□□ -1.1
CALD1-219ENST00000480638 PPM1BO75688 479 aa8.19□□□□□ -1.1
CALD1-219ENST00000480638 DDAH1O94760 285 aa8.19□□□□□ -1.1
CALD1-219ENST00000480638 VAV1P15498 845 aa8.19□□□□□ -1.1
CALD1-219ENST00000480638 RPL10P27635 214 aaKnown RBP8.19□□□□□ -1.1
CALD1-219ENST00000480638 ZNF143P52747 638 aaPredicted RBP8.19□□□□□ -1.1
CALD1-219ENST00000480638 HK2P52789 917 aa8.19□□□□□ -1.1
CALD1-219ENST00000480638 CWF19L1Q69YN2 538 aaKnown RBP8.19□□□□□ -1.1
CALD1-219ENST00000480638 MRM1Q6IN84 353 aaKnown RBP8.19□□□□□ -1.1
CALD1-219ENST00000480638 WAPLQ7Z5K2 1190 aa8.19□□□□□ -1.1
CALD1-219ENST00000480638 SF3B6Q9Y3B4 125 aaKnown RBP8.19□□□□□ -1.1
CALD1-219ENST00000480638 GJB6O95452 261 aa8.18□□□□□ -1.1
CALD1-219ENST00000480638 DUSP4Q13115 394 aa8.18□□□□□ -1.1
CALD1-219ENST00000480638 PPP2R5DQ14738 602 aa8.18□□□□□ -1.1
CALD1-219ENST00000480638 SF3A1Q15459 793 aaKnown RBP8.18□□□□□ -1.1
CALD1-219ENST00000480638 DDR2Q16832 855 aa8.18□□□□□ -1.1
CALD1-219ENST00000480638 ZNF513Q8N8E2 541 aaPredicted RBP8.18□□□□□ -1.1
CALD1-219ENST00000480638 DHX38Q92620 1227 aaKnown RBP8.18□□□□□ -1.1
CALD1-219ENST00000480638 ZDHHC15Q96MV8 337 aa8.18□□□□□ -1.1
CALD1-219ENST00000480638 G6PC3Q9BUM1 346 aa8.18□□□□□ -1.1
CALD1-219ENST00000480638 APEX2Q9UBZ4 518 aa8.18□□□□□ -1.1
CALD1-219ENST00000480638 CGGBP1Q9UFW8 167 aaPredicted RBP8.18□□□□□ -1.1
CALD1-219ENST00000480638 EBF1Q9UH73 591 aa8.18□□□□□ -1.1
CALD1-219ENST00000480638 DIS3Q9Y2L1 958 aaKnown RBP8.18□□□□□ -1.1
CALD1-219ENST00000480638 SUGT1Q9Y2Z0 365 aa8.18□□□□□ -1.1
CALD1-219ENST00000480638 BIN1O00499 593 aa8.17□□□□□ -1.1
CALD1-219ENST00000480638 NAT2P11245 290 aa8.17□□□□□ -1.1
CALD1-219ENST00000480638 JUNBP17275 347 aaPredicted RBP8.17□□□□□ -1.1
CALD1-219ENST00000480638 GTF2F1P35269 517 aaKnown RBP eCLIP8.17□□□□□ -1.1
CALD1-219ENST00000480638 RAB33AQ14088 237 aa8.17□□□□□ -1.1
CALD1-219ENST00000480638 ZPBP2Q6X784 338 aa8.17□□□□□ -1.1
CALD1-219ENST00000480638 CKAP2LQ8IYA6 745 aa8.17□□□□□ -1.1
CALD1-219ENST00000480638 PDZD8Q8NEN9 1154 aa8.17□□□□□ -1.1
CALD1-219ENST00000480638 LINC01599Q8WXQ3 324 aa8.17□□□□□ -1.1
CALD1-219ENST00000480638 ARMC5Q96C12 935 aa8.17□□□□□ -1.1
CALD1-219ENST00000480638 SLC12A9Q9BXP2 914 aa8.17□□□□□ -1.1
CALD1-219ENST00000480638 SUSD5O60279 629 aa8.16□□□□□ -1.1
CALD1-219ENST00000480638 HPXP02790 462 aa8.16□□□□□ -1.1
CALD1-219ENST00000480638 ENDOUP21128 410 aaKnown RBP8.16□□□□□ -1.1
CALD1-219ENST00000480638 AFMP43652 599 aa8.16□□□□□ -1.1
CALD1-219ENST00000480638 ERVFC1P60507 584 aa8.16□□□□□ -1.1
CALD1-219ENST00000480638 RTP2Q5QGT7 225 aa8.16□□□□□ -1.1
CALD1-219ENST00000480638 ARHGEF39Q8N4T4 335 aa8.16□□□□□ -1.1
CALD1-219ENST00000480638 SREK1Q8WXA9 508 aaKnown RBP8.16□□□□□ -1.1
CALD1-219ENST00000480638 RCC1LQ96I51 464 aaKnown RBP8.16□□□□□ -1.1
CALD1-219ENST00000480638 MAP6Q96JE9 813 aa8.16□□□□□ -1.1
CALD1-219ENST00000480638 FCRL2Q96LA5 508 aaPredicted RBP8.16□□□□□ -1.1
CALD1-219ENST00000480638 APBA2Q99767 749 aa8.16□□□□□ -1.1
CALD1-219ENST00000480638 CDADC1Q9BWV3 514 aa8.16□□□□□ -1.1
CALD1-219ENST00000480638 ST7Q9NRC1 585 aa8.16□□□□□ -1.1
CALD1-219ENST00000480638 AP5S1Q9NUS5 200 aa8.16□□□□□ -1.1
CALD1-219ENST00000480638 ZMYM5Q9UJ78 669 aa8.16□□□□□ -1.1
CALD1-219ENST00000480638 CD3EP07766 207 aa8.15□□□□□ -1.1
CALD1-219ENST00000480638 RAC2P15153 192 aa8.15□□□□□ -1.1
CALD1-219ENST00000480638 POU4F1Q01851 419 aa8.15□□□□□ -1.1
CALD1-219ENST00000480638 ANKS4BQ8N8V4 417 aa8.15□□□□□ -1.1
CALD1-219ENST00000480638 TRIM55Q9BYV6 548 aa8.15□□□□□ -1.1
CALD1-219ENST00000480638 SP110Q9HB58 689 aa8.15□□□□□ -1.1
CALD1-219ENST00000480638 ERVK13-1Q9NX77 482 aa8.15□□□□□ -1.1
CALD1-219ENST00000480638 FITM1A5D6W6 292 aa8.14□□□□□ -1.11
CALD1-219ENST00000480638 GSTM1P09488 218 aa8.14□□□□□ -1.11
CALD1-219ENST00000480638 GRB10Q13322 594 aa8.14□□□□□ -1.11
CALD1-219ENST00000480638 FYB2Q5VWT5 728 aa8.14□□□□□ -1.11
CALD1-219ENST00000480638 EEPD1Q7L9B9 569 aa8.14□□□□□ -1.11
CALD1-219ENST00000480638 OXR1Q8N573 874 aa8.14□□□□□ -1.11
CALD1-219ENST00000480638 BVESQ8NE79 360 aa8.14□□□□□ -1.11
CALD1-219ENST00000480638 FCRL3Q96P31 734 aaPredicted RBP8.14□□□□□ -1.11
CALD1-219ENST00000480638 PPP1R1BQ9UD71 204 aaPredicted RBP8.14□□□□□ -1.11
CALD1-219ENST00000480638 AKT3Q9Y243 479 aa8.14□□□□□ -1.11
CALD1-219ENST00000480638 USP2O75604 605 aaPredicted RBP8.13□□□□□ -1.11
CALD1-219ENST00000480638 IFNGR1P15260 489 aa8.13□□□□□ -1.11
CALD1-219ENST00000480638 KIR2DL1P43626 348 aaPredicted RBP8.13□□□□□ -1.11
CALD1-219ENST00000480638 KIR2DL2P43627 348 aaPredicted RBP8.13□□□□□ -1.11
CALD1-219ENST00000480638 CHRNEQ04844 493 aa8.13□□□□□ -1.11
CALD1-219ENST00000480638 NBPF6Q5VWK0 638 aa8.13□□□□□ -1.11
CALD1-219ENST00000480638 ZSWIM9Q86XI8 627 aa8.13□□□□□ -1.11
CALD1-219ENST00000480638 MYLIPQ8WY64 445 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms