RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 IRS4O14654 1257 aaPredicted RBP23.22■■□□□ 1.31
COL13A1-208ENST00000479733 TRIM21P19474 475 aaKnown RBP23.22■■□□□ 1.31
COL13A1-208ENST00000479733 ARID4AP29374 1257 aaPredicted RBP23.22■■□□□ 1.31
COL13A1-208ENST00000479733 IL17AQ16552 155 aa23.22■■□□□ 1.31
COL13A1-208ENST00000479733 CAPS2Q9BXY5 557 aa23.22■■□□□ 1.31
COL13A1-208ENST00000479733 DNAJC5Q9H3Z4 198 aa23.22■■□□□ 1.31
COL13A1-208ENST00000479733 SMARCAL1Q9NZC9 954 aa23.22■■□□□ 1.31
COL13A1-208ENST00000479733 GTPBP6O43824 516 aaPredicted RBP23.21■■□□□ 1.31
COL13A1-208ENST00000479733 IPO7O95373 1038 aaKnown RBP23.21■■□□□ 1.31
COL13A1-208ENST00000479733 ZNF512BQ96KM6 892 aaPredicted RBP23.21■■□□□ 1.31
COL13A1-208ENST00000479733 TARSL2A2RTX5 802 aaKnown RBP23.21■■□□□ 1.31
COL13A1-208ENST00000479733 ADAMTS3O15072 1205 aa23.21■■□□□ 1.31
COL13A1-208ENST00000479733 KRT83P78385 493 aa23.21■■□□□ 1.31
COL13A1-208ENST00000479733 BRMS1Q9HCU9 246 aa23.21■■□□□ 1.31
COL13A1-208ENST00000479733 DMGDHQ9UI17 866 aaKnown RBP23.21■■□□□ 1.31
COL13A1-208ENST00000479733 TRMT112Q9UI30 125 aaKnown RBP23.21■■□□□ 1.31
COL13A1-208ENST00000479733 KIF1AQ12756 1690 aa23.21■■□□□ 1.31
COL13A1-208ENST00000479733 CYP2D7A0A087X1C5 515 aa23.2■■□□□ 1.3
COL13A1-208ENST00000479733 DNAJC10Q8IXB1 793 aa23.2■■□□□ 1.3
COL13A1-208ENST00000479733 TRIM47Q96LD4 638 aa23.2■■□□□ 1.3
COL13A1-208ENST00000479733 LRRC1Q9BTT6 524 aa23.2■■□□□ 1.3
COL13A1-208ENST00000479733 CXCR5P32302 372 aa23.2■■□□□ 1.3
COL13A1-208ENST00000479733 MMS22LQ6ZRQ5 1243 aa23.2■■□□□ 1.3
COL13A1-208ENST00000479733 KRT26Q7Z3Y9 468 aa23.2■■□□□ 1.3
COL13A1-208ENST00000479733 PROSER2Q86WR7 435 aaPredicted RBP23.2■■□□□ 1.3
COL13A1-208ENST00000479733 DNAJC7Q99615 494 aa23.2■■□□□ 1.3
COL13A1-208ENST00000479733 PLA2G12BQ9BX93 195 aa23.2■■□□□ 1.3
COL13A1-208ENST00000479733 NHEJ1Q9H9Q4 299 aaPredicted RBP23.2■■□□□ 1.3
COL13A1-208ENST00000479733 LAMB4A4D0S4 1761 aa23.2■■□□□ 1.3
COL13A1-208ENST00000479733 ADAMTSL3P82987 1691 aa23.2■■□□□ 1.3
COL13A1-208ENST00000479733 SPATA31A3Q5VYP0 1347 aa23.2■■□□□ 1.3
COL13A1-208ENST00000479733 ATP2C1P98194 919 aaPredicted RBP23.19■■□□□ 1.3
COL13A1-208ENST00000479733 LRP2BPQ9P2M1 347 aa23.19■■□□□ 1.3
COL13A1-208ENST00000479733 LGALS16A8MUM7 142 aa23.19■■□□□ 1.3
COL13A1-208ENST00000479733 VEGFAP15692 232 aaPredicted RBP23.19■■□□□ 1.3
COL13A1-208ENST00000479733 ENAHQ8N8S7 591 aaPredicted RBP23.19■■□□□ 1.3
COL13A1-208ENST00000479733 EHD2Q9NZN4 543 aa23.19■■□□□ 1.3
COL13A1-208ENST00000479733 CAPN11Q9UMQ6 739 aa23.19■■□□□ 1.3
COL13A1-208ENST00000479733 H7C1D1 291 aa23.19■■□□□ 1.3
COL13A1-208ENST00000479733 STAT6P42226 847 aa23.19■■□□□ 1.3
COL13A1-208ENST00000479733 PUM3Q15397 648 aaKnown RBP23.19■■□□□ 1.3
COL13A1-208ENST00000479733 ANKRD18AQ8IVF6 992 aa23.19■■□□□ 1.3
COL13A1-208ENST00000479733 LPIN2Q92539 896 aa23.19■■□□□ 1.3
COL13A1-208ENST00000479733 ZNHIT6Q9NWK9 470 aaKnown RBP23.19■■□□□ 1.3
COL13A1-208ENST00000479733 BCAMP50895 628 aa23.18■■□□□ 1.3
COL13A1-208ENST00000479733 NLRP10Q86W26 655 aa23.18■■□□□ 1.3
COL13A1-208ENST00000479733 MAGEC2Q9UBF1 373 aaPredicted RBP23.18■■□□□ 1.3
COL13A1-208ENST00000479733 FAM184BQ9ULE4 1060 aa23.18■■□□□ 1.3
COL13A1-208ENST00000479733 SOS2Q07890 1332 aaPredicted RBP23.18■■□□□ 1.3
COL13A1-208ENST00000479733 PKD1L3Q7Z443 1732 aa23.18■■□□□ 1.3
COL13A1-208ENST00000479733 SHOX2O60902 331 aaPredicted RBP23.18■■□□□ 1.3
COL13A1-208ENST00000479733 CYLC1P35663 651 aaPredicted RBP23.18■■□□□ 1.3
COL13A1-208ENST00000479733 TRIM28Q13263 835 aaKnown RBP23.18■■□□□ 1.3
COL13A1-208ENST00000479733 IFIT1BQ5T764 474 aaKnown RBP23.18■■□□□ 1.3
COL13A1-208ENST00000479733 TOM1L2Q6ZVM7 507 aa23.18■■□□□ 1.3
COL13A1-208ENST00000479733 RNF41Q9H4P4 317 aaPredicted RBP23.18■■□□□ 1.3
COL13A1-208ENST00000479733 LRWD1Q9UFC0 647 aa23.18■■□□□ 1.3
COL13A1-208ENST00000479733 PP2D1A8MPX8 630 aa23.17■■□□□ 1.3
COL13A1-208ENST00000479733 BMP15O95972 392 aa23.17■■□□□ 1.3
COL13A1-208ENST00000479733 MNAT1P51948 309 aa23.17■■□□□ 1.3
COL13A1-208ENST00000479733 NLRP5P59047 1200 aa23.17■■□□□ 1.3
COL13A1-208ENST00000479733 PPFIA1Q13136 1202 aa23.17■■□□□ 1.3
COL13A1-208ENST00000479733 SEC23AQ15436 765 aa23.17■■□□□ 1.3
COL13A1-208ENST00000479733 CCDC96Q2M329 555 aa23.17■■□□□ 1.3
COL13A1-208ENST00000479733 ESR2Q92731 530 aa23.17■■□□□ 1.3
COL13A1-208ENST00000479733 RPGRIP1Q96KN7 1286 aa23.17■■□□□ 1.3
COL13A1-208ENST00000479733 GLI3P10071 1580 aa23.17■■□□□ 1.3
COL13A1-208ENST00000479733 SHTN1A0MZ66 631 aa23.17■■□□□ 1.3
COL13A1-208ENST00000479733 PPARDQ03181 441 aa23.17■■□□□ 1.3
COL13A1-208ENST00000479733 KCTD16Q68DU8 428 aa23.17■■□□□ 1.3
COL13A1-208ENST00000479733 CCDC70Q6NSX1 233 aa23.17■■□□□ 1.3
COL13A1-208ENST00000479733 CATIPQ7Z7H3 387 aa23.17■■□□□ 1.3
COL13A1-208ENST00000479733 EHBP1Q8NDI1 1231 aa23.17■■□□□ 1.3
COL13A1-208ENST00000479733 YY1AP1Q9H869 796 aa23.17■■□□□ 1.3
COL13A1-208ENST00000479733 NID2Q14112 1375 aa23.16■■□□□ 1.3
COL13A1-208ENST00000479733 PLEKP08567 350 aaPredicted RBP23.16■■□□□ 1.3
COL13A1-208ENST00000479733 FUT2Q10981 343 aa23.16■■□□□ 1.3
COL13A1-208ENST00000479733 KIF5AQ12840 1032 aa23.16■■□□□ 1.3
COL13A1-208ENST00000479733 NPY5RQ15761 445 aa23.16■■□□□ 1.3
COL13A1-208ENST00000479733 ARL8AQ96BM9 186 aa23.16■■□□□ 1.3
COL13A1-208ENST00000479733 RMND1Q9NWS8 449 aa23.16■■□□□ 1.3
COL13A1-208ENST00000479733 ABCF2Q9UG63 623 aa23.16■■□□□ 1.3
COL13A1-208ENST00000479733 CPP00450 1065 aa23.16■■□□□ 1.3
COL13A1-208ENST00000479733 ATP1A2P50993 1020 aa23.16■■□□□ 1.3
COL13A1-208ENST00000479733 TBC1D8BQ0IIM8 1120 aa23.16■■□□□ 1.3
COL13A1-208ENST00000479733 AENQ8WTP8 325 aaKnown RBP23.16■■□□□ 1.3
COL13A1-208ENST00000479733 SECISBP2LQ93073 1101 aaKnown RBP23.16■■□□□ 1.3
COL13A1-208ENST00000479733 NUP188Q5SRE5 1749 aa23.16■■□□□ 1.3
COL13A1-208ENST00000479733 PRPF3O43395 683 aaKnown RBP23.15■■□□□ 1.3
COL13A1-208ENST00000479733 ADSSL1Q8N142 457 aa23.15■■□□□ 1.3
COL13A1-208ENST00000479733 ZNF507Q8TCN5 953 aa23.15■■□□□ 1.3
COL13A1-208ENST00000479733 MLXIPQ9HAP2 919 aa23.15■■□□□ 1.3
COL13A1-208ENST00000479733 PDCLQ13371 301 aa23.15■■□□□ 1.3
COL13A1-208ENST00000479733 SH2D3CQ8N5H7 860 aa23.15■■□□□ 1.3
COL13A1-208ENST00000479733 ERVV-2B6SEH9 535 aa23.15■■□□□ 1.3
COL13A1-208ENST00000479733 EIF3HO15372 352 aaKnown RBP eCLIP23.15■■□□□ 1.3
COL13A1-208ENST00000479733 ZEB2O60315 1214 aa23.15■■□□□ 1.3
COL13A1-208ENST00000479733 CYP7A1P22680 504 aa23.15■■□□□ 1.3
COL13A1-208ENST00000479733 MCTP2Q6DN12 878 aa23.15■■□□□ 1.3
COL13A1-208ENST00000479733 ADGRA1Q86SQ6 560 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms