RNA–Protein interactions for RNA: ENST00000479591.1

TM9SF4-206, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-206ENST00000479591 CLEC11AQ9Y240 323 aa13.77□□□□□ -0.21
TM9SF4-206ENST00000479591 CSADQ9Y600 493 aa13.77□□□□□ -0.21
TM9SF4-206ENST00000479591 BAZ2BQ9UIF8 2168 aaKnown RBP13.76□□□□□ -0.21
TM9SF4-206ENST00000479591 PHIPQ8WWQ0 1821 aa13.76□□□□□ -0.21
TM9SF4-206ENST00000479591 KIF28PB7ZC32 967 aa13.76□□□□□ -0.21
TM9SF4-206ENST00000479591 TMEM232C9JQI7 657 aa13.76□□□□□ -0.21
TM9SF4-206ENST00000479591 STXBP3O00186 592 aa13.76□□□□□ -0.21
TM9SF4-206ENST00000479591 ZBTB5O15062 677 aa13.76□□□□□ -0.21
TM9SF4-206ENST00000479591 WDR46O15213 610 aaKnown RBP13.76□□□□□ -0.21
TM9SF4-206ENST00000479591 NCLP19338 710 aaKnown RBP13.76□□□□□ -0.21
TM9SF4-206ENST00000479591 SLC16A2P36021 539 aa13.76□□□□□ -0.21
TM9SF4-206ENST00000479591 IKQ13123 557 aaPredicted RBP13.76□□□□□ -0.21
TM9SF4-206ENST00000479591 MAP3K11Q16584 847 aa13.76□□□□□ -0.21
TM9SF4-206ENST00000479591 SYDE2Q5VT97 1194 aa13.76□□□□□ -0.21
TM9SF4-206ENST00000479591 MYSM1Q5VVJ2 828 aa13.76□□□□□ -0.21
TM9SF4-206ENST00000479591 PPP1R18Q6NYC8 613 aa13.76□□□□□ -0.21
TM9SF4-206ENST00000479591 FAM160B2Q86V87 743 aa13.76□□□□□ -0.21
TM9SF4-206ENST00000479591 NOSTRINQ8IVI9 506 aa13.76□□□□□ -0.21
TM9SF4-206ENST00000479591 PIAS4Q8N2W9 510 aaPredicted RBP13.76□□□□□ -0.21
TM9SF4-206ENST00000479591 CHURC1Q8WUH1 139 aa13.76□□□□□ -0.21
TM9SF4-206ENST00000479591 GPKOWQ92917 476 aaPredicted RBP eCLIP13.76□□□□□ -0.21
TM9SF4-206ENST00000479591 GLIS2Q9BZE0 524 aaPredicted RBP13.76□□□□□ -0.21
TM9SF4-206ENST00000479591 RRAGCQ9HB90 399 aa13.76□□□□□ -0.21
TM9SF4-206ENST00000479591 FEM1BQ9UK73 627 aa13.76□□□□□ -0.21
TM9SF4-206ENST00000479591 CNPY2Q9Y2B0 182 aa13.76□□□□□ -0.21
TM9SF4-206ENST00000479591 OTOFQ9HC10 1997 aa13.76□□□□□ -0.21
TM9SF4-206ENST00000479591 ELP1O95163 1332 aa13.75□□□□□ -0.21
TM9SF4-206ENST00000479591 ESYT2A0FGR8 921 aa13.75□□□□□ -0.21
TM9SF4-206ENST00000479591 BTBD18B2RXH4 712 aa13.75□□□□□ -0.21
TM9SF4-206ENST00000479591 C19orf81C9J6K1 198 aa13.75□□□□□ -0.21
TM9SF4-206ENST00000479591 GNA11P29992 359 aa13.75□□□□□ -0.21
TM9SF4-206ENST00000479591 NAPAP54920 295 aa13.75□□□□□ -0.21
TM9SF4-206ENST00000479591 BACE1P56817 501 aa13.75□□□□□ -0.21
TM9SF4-206ENST00000479591 TRAF1Q13077 416 aa13.75□□□□□ -0.21
TM9SF4-206ENST00000479591 SPP2Q13103 211 aa13.75□□□□□ -0.21
TM9SF4-206ENST00000479591 PRKG1Q13976 671 aa13.75□□□□□ -0.21
TM9SF4-206ENST00000479591 NBR1Q14596 966 aa13.75□□□□□ -0.21
TM9SF4-206ENST00000479591 ZYXQ15942 572 aaKnown RBP13.75□□□□□ -0.21
TM9SF4-206ENST00000479591 FAM83BQ5T0W9 1011 aa13.75□□□□□ -0.21
TM9SF4-206ENST00000479591 FAM173BQ6P4H8 233 aa13.75□□□□□ -0.21
TM9SF4-206ENST00000479591 ARMC9Q7Z3E5 817 aa13.75□□□□□ -0.21
TM9SF4-206ENST00000479591 CCDC84Q86UT8 332 aaPredicted RBP13.75□□□□□ -0.21
TM9SF4-206ENST00000479591 LDHDQ86WU2 507 aa13.75□□□□□ -0.21
TM9SF4-206ENST00000479591 ANKRD13AQ8IZ07 590 aa13.75□□□□□ -0.21
TM9SF4-206ENST00000479591 SPICE1Q8N0Z3 855 aa13.75□□□□□ -0.21
TM9SF4-206ENST00000479591 DAGLBQ8NCG7 672 aa13.75□□□□□ -0.21
TM9SF4-206ENST00000479591 SHISA4Q96DD7 197 aa13.75□□□□□ -0.21
TM9SF4-206ENST00000479591 NUP88Q99567 741 aaPredicted RBP13.75□□□□□ -0.21
TM9SF4-206ENST00000479591 C6orf50Q9HD87 102 aa13.75□□□□□ -0.21
TM9SF4-206ENST00000479591 PCDHA4Q9UN74 947 aa13.75□□□□□ -0.21
TM9SF4-206ENST00000479591 UNCXA6NJT0 531 aa13.74□□□□□ -0.21
TM9SF4-206ENST00000479591 FIBPO43427 364 aa13.74□□□□□ -0.21
TM9SF4-206ENST00000479591 PRPF40AO75400 957 aaKnown RBP13.74□□□□□ -0.21
TM9SF4-206ENST00000479591 MTMR2Q13614 643 aa13.74□□□□□ -0.21
TM9SF4-206ENST00000479591 VGLL4Q14135 290 aa13.74□□□□□ -0.21
TM9SF4-206ENST00000479591 NPY5RQ15761 445 aa13.74□□□□□ -0.21
TM9SF4-206ENST00000479591 CDC37Q16543 378 aaPredicted RBP13.74□□□□□ -0.21
TM9SF4-206ENST00000479591 SKOR2Q2VWA4 1001 aaPredicted RBP13.74□□□□□ -0.21
TM9SF4-206ENST00000479591 KIAA1755Q5JYT7 1200 aa13.74□□□□□ -0.21
TM9SF4-206ENST00000479591 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.74□□□□□ -0.21
TM9SF4-206ENST00000479591 BLIDQ8IZY5 108 aa13.74□□□□□ -0.21
TM9SF4-206ENST00000479591 RBM46Q8TBY0 533 aaKnown RBP13.74□□□□□ -0.21
TM9SF4-206ENST00000479591 BICD2Q8TD16 824 aa13.74□□□□□ -0.21
TM9SF4-206ENST00000479591 CHAMP1Q96JM3 812 aa13.74□□□□□ -0.21
TM9SF4-206ENST00000479591 C12orf42Q96LP6 360 aa13.74□□□□□ -0.21
TM9SF4-206ENST00000479591 ZMYND12Q9H0C1 365 aa13.74□□□□□ -0.21
TM9SF4-206ENST00000479591 LMBRD1Q9NUN5 540 aa13.74□□□□□ -0.21
TM9SF4-206ENST00000479591 FZD1Q9UP38 647 aa13.74□□□□□ -0.21
TM9SF4-206ENST00000479591 SNCAIPQ9Y6H5 919 aa13.74□□□□□ -0.21
TM9SF4-206ENST00000479591 ZHX2Q9Y6X8 837 aa13.74□□□□□ -0.21
TM9SF4-206ENST00000479591 NR5A1Q13285 461 aa13.73□□□□□ -0.21
TM9SF4-206ENST00000479591 TTLL12Q14166 644 aaPredicted RBP13.73□□□□□ -0.21
TM9SF4-206ENST00000479591 QRICH1Q2TAL8 776 aa13.73□□□□□ -0.21
TM9SF4-206ENST00000479591 RILPL1Q5EBL4 403 aa13.73□□□□□ -0.21
TM9SF4-206ENST00000479591 TYW1BQ6NUM6 668 aa13.73□□□□□ -0.21
TM9SF4-206ENST00000479591 DLK2Q6UY11 383 aa13.73□□□□□ -0.21
TM9SF4-206ENST00000479591 SPATA32Q96LK8 384 aa13.73□□□□□ -0.21
TM9SF4-206ENST00000479591 GLT8D2Q9H1C3 349 aa13.73□□□□□ -0.21
TM9SF4-206ENST00000479591 POLR3EQ9NVU0 708 aa13.73□□□□□ -0.21
TM9SF4-206ENST00000479591 TFIP11Q9UBB9 837 aaKnown RBP13.73□□□□□ -0.21
TM9SF4-206ENST00000479591 PRR12Q9ULL5 1215 aa13.73□□□□□ -0.21
TM9SF4-206ENST00000479591 AFG3L2Q9Y4W6 797 aa13.73□□□□□ -0.21
TM9SF4-206ENST00000479591 SMCO2A6NFE2 343 aa13.72□□□□□ -0.21
TM9SF4-206ENST00000479591 YEATS4O95619 227 aa13.72□□□□□ -0.21
TM9SF4-206ENST00000479591 POTEIP0CG38 1075 aa13.72□□□□□ -0.21
TM9SF4-206ENST00000479591 POTEJP0CG39 1038 aa13.72□□□□□ -0.21
TM9SF4-206ENST00000479591 PPATQ06203 517 aa13.72□□□□□ -0.21
TM9SF4-206ENST00000479591 MAP1SQ66K74 1059 aaPredicted RBP13.72□□□□□ -0.21
TM9SF4-206ENST00000479591 TEX2Q8IWB9 1127 aa13.72□□□□□ -0.21
TM9SF4-206ENST00000479591 ZNF784Q8NCA9 323 aaPredicted RBP13.72□□□□□ -0.21
TM9SF4-206ENST00000479591 OXER1Q8TDS5 423 aa13.72□□□□□ -0.21
TM9SF4-206ENST00000479591 LEO1Q8WVC0 666 aaPredicted RBP13.72□□□□□ -0.21
TM9SF4-206ENST00000479591 TNFRSF25Q93038 417 aa13.72□□□□□ -0.21
TM9SF4-206ENST00000479591 USP28Q96RU2 1077 aa13.72□□□□□ -0.21
TM9SF4-206ENST00000479591 AMNQ9BXJ7 453 aa13.72□□□□□ -0.21
TM9SF4-206ENST00000479591 RANBP17Q9H2T7 1088 aaKnown RBP13.72□□□□□ -0.21
TM9SF4-206ENST00000479591 GDPD2Q9HCC8 539 aa13.72□□□□□ -0.21
TM9SF4-206ENST00000479591 EMILIN3Q9NT22 766 aa13.72□□□□□ -0.21
TM9SF4-206ENST00000479591 RTEL1Q9NZ71 1219 aa13.72□□□□□ -0.21
TM9SF4-206ENST00000479591 TMOD4Q9NZQ9 345 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms