RNA–Protein interactions for RNA: ENST00000478887.1

SFI1-222, Transcript of SFI1 centrin binding protein, human

TSL 4

Gene SFI1, Length 662 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-222	ENST00000478887	HOXD10	P28358	340 aa		11.11	□□□□□ -0.63
SFI1-222	ENST00000478887	C8orf34	Q49A92	452 aa		11.11	□□□□□ -0.63
SFI1-222	ENST00000478887	ASPRV1	Q53RT3	343 aa		11.11	□□□□□ -0.63
SFI1-222	ENST00000478887	TMEM67	Q5HYA8	995 aa		11.11	□□□□□ -0.63
SFI1-222	ENST00000478887	GPATCH4	Q5T3I0	446 aa	Known RBP	11.11	□□□□□ -0.63
SFI1-222	ENST00000478887	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.11	□□□□□ -0.63
SFI1-222	ENST00000478887	MOV10L1	Q9BXT6	1211 aa	Known RBP	11.11	□□□□□ -0.63
SFI1-222	ENST00000478887	LY9	Q9HBG7	655 aa		11.11	□□□□□ -0.63
SFI1-222	ENST00000478887	SLC38A10	Q9HBR0	1119 aa		11.11	□□□□□ -0.63
SFI1-222	ENST00000478887	SENP2	Q9HC62	589 aa		11.11	□□□□□ -0.63
SFI1-222	ENST00000478887	MTMR7	Q9Y216	660 aa		11.11	□□□□□ -0.63
SFI1-222	ENST00000478887	HMGB1	P09429	215 aa	Known RBP	11.1	□□□□□ -0.63
SFI1-222	ENST00000478887	COPB2	P35606	906 aa		11.1	□□□□□ -0.63
SFI1-222	ENST00000478887	LIFR	P42702	1097 aa		11.1	□□□□□ -0.63
SFI1-222	ENST00000478887	OAZ1	P54368	228 aa		11.1	□□□□□ -0.63
SFI1-222	ENST00000478887	EXOSC10	Q01780	885 aa	Known RBP	11.1	□□□□□ -0.63
SFI1-222	ENST00000478887	PRKCZ	Q05513	592 aa		11.1	□□□□□ -0.63
SFI1-222	ENST00000478887	TROAP	Q12815	778 aa		11.1	□□□□□ -0.63
SFI1-222	ENST00000478887	IK	Q13123	557 aa	Predicted RBP	11.1	□□□□□ -0.63
SFI1-222	ENST00000478887	TTBK2	Q6IQ55	1244 aa		11.1	□□□□□ -0.63
SFI1-222	ENST00000478887	GPR142	Q7Z601	462 aa		11.1	□□□□□ -0.63
SFI1-222	ENST00000478887	RIOX2	Q8IUF8	465 aa		11.1	□□□□□ -0.63
SFI1-222	ENST00000478887	TNS4	Q8IZW8	715 aa		11.1	□□□□□ -0.63
SFI1-222	ENST00000478887	KIFC2	Q96AC6	838 aa		11.1	□□□□□ -0.63
SFI1-222	ENST00000478887	COA7	Q96BR5	231 aa		11.1	□□□□□ -0.63
SFI1-222	ENST00000478887	CHMP4C	Q96CF2	233 aa		11.1	□□□□□ -0.63
SFI1-222	ENST00000478887	TEX13B	Q9BXU2	312 aa		11.1	□□□□□ -0.63
SFI1-222	ENST00000478887	GPHN	Q9NQX3	736 aa	Predicted RBP	11.1	□□□□□ -0.63
SFI1-222	ENST00000478887	PRR12	Q9ULL5	1215 aa		11.1	□□□□□ -0.63
SFI1-222	ENST00000478887	ISY1	Q9ULR0	285 aa	Known RBP	11.1	□□□□□ -0.63
SFI1-222	ENST00000478887	FRMPD2	Q68DX3	1309 aa	Predicted RBP	11.09	□□□□□ -0.63
SFI1-222	ENST00000478887	ZNF236	Q9UL36	1845 aa		11.09	□□□□□ -0.63
SFI1-222	ENST00000478887	ZBED4	O75132	1171 aa		11.09	□□□□□ -0.63
SFI1-222	ENST00000478887	DDAH1	O94760	285 aa		11.09	□□□□□ -0.63
SFI1-222	ENST00000478887	ECM2	O94769	699 aa	Predicted RBP	11.09	□□□□□ -0.63
SFI1-222	ENST00000478887	SLC25A27	O95847	323 aa		11.09	□□□□□ -0.63
SFI1-222	ENST00000478887	ERCC3	P19447	782 aa		11.09	□□□□□ -0.63
SFI1-222	ENST00000478887	STAT3	P40763	770 aa		11.09	□□□□□ -0.63
SFI1-222	ENST00000478887	IRF5	Q13568	498 aa		11.09	□□□□□ -0.63
SFI1-222	ENST00000478887	MORN1	Q5T089	497 aa		11.09	□□□□□ -0.63
SFI1-222	ENST00000478887	SYDE2	Q5VT97	1194 aa		11.09	□□□□□ -0.63
SFI1-222	ENST00000478887	DHX32	Q7L7V1	743 aa	Known RBP	11.09	□□□□□ -0.63
SFI1-222	ENST00000478887	PLEKHH3	Q7Z736	793 aa		11.09	□□□□□ -0.63
SFI1-222	ENST00000478887	SGMS1	Q86VZ5	419 aa		11.09	□□□□□ -0.63
SFI1-222	ENST00000478887	TMTC2	Q8N394	836 aa		11.09	□□□□□ -0.63
SFI1-222	ENST00000478887	SOCS4	Q8WXH5	440 aa		11.09	□□□□□ -0.63
SFI1-222	ENST00000478887	JAKMIP1	Q96N16	626 aa	Known RBP	11.09	□□□□□ -0.63
SFI1-222	ENST00000478887	RANBP17	Q9H2T7	1088 aa	Known RBP	11.09	□□□□□ -0.63
SFI1-222	ENST00000478887	MROH8	Q9H579	483 aa		11.09	□□□□□ -0.63
SFI1-222	ENST00000478887	GPCPD1	Q9NPB8	672 aa		11.09	□□□□□ -0.63
SFI1-222	ENST00000478887	GJD2	Q9UKL4	321 aa		11.09	□□□□□ -0.63
SFI1-222	ENST00000478887	GABRQ	Q9UN88	632 aa		11.09	□□□□□ -0.63
SFI1-222	ENST00000478887	PTCH2	Q9Y6C5	1203 aa		11.09	□□□□□ -0.63
SFI1-222	ENST00000478887	ZNF536	O15090	1300 aa		11.09	□□□□□ -0.63
SFI1-222	ENST00000478887	MGAM	O43451	1857 aa		11.08	□□□□□ -0.64
SFI1-222	ENST00000478887	SLC15A5	A6NIM6	579 aa		11.08	□□□□□ -0.64
SFI1-222	ENST00000478887	PARP1	P09874	1014 aa	Known RBP	11.08	□□□□□ -0.64
SFI1-222	ENST00000478887	GOLGA8H	P0CJ92	632 aa		11.08	□□□□□ -0.64
SFI1-222	ENST00000478887	PSMA5	P28066	241 aa		11.08	□□□□□ -0.64
SFI1-222	ENST00000478887	SLC16A2	P36021	539 aa		11.08	□□□□□ -0.64
SFI1-222	ENST00000478887	FLT3LG	P49771	235 aa		11.08	□□□□□ -0.64
SFI1-222	ENST00000478887	GRB14	Q14449	540 aa		11.08	□□□□□ -0.64
SFI1-222	ENST00000478887	PLS1	Q14651	629 aa		11.08	□□□□□ -0.64
SFI1-222	ENST00000478887	GRM4	Q14833	912 aa		11.08	□□□□□ -0.64
SFI1-222	ENST00000478887	SNRNP48	Q6IEG0	339 aa	Known RBP	11.08	□□□□□ -0.64
SFI1-222	ENST00000478887	BLOC1S2	Q6QNY1	142 aa		11.08	□□□□□ -0.64
SFI1-222	ENST00000478887	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.08	□□□□□ -0.64
SFI1-222	ENST00000478887	CATIP	Q7Z7H3	387 aa		11.08	□□□□□ -0.64
SFI1-222	ENST00000478887	CCAR1	Q8IX12	1150 aa	Known RBP	11.08	□□□□□ -0.64
SFI1-222	ENST00000478887	ZNF654	Q8IZM8	581 aa		11.08	□□□□□ -0.64
SFI1-222	ENST00000478887	USP6NL	Q92738	828 aa		11.08	□□□□□ -0.64
SFI1-222	ENST00000478887	IL17RA	Q96F46	866 aa		11.08	□□□□□ -0.64
SFI1-222	ENST00000478887	MAP3K14	Q99558	947 aa		11.08	□□□□□ -0.64
SFI1-222	ENST00000478887	NUDT12	Q9BQG2	462 aa		11.08	□□□□□ -0.64
SFI1-222	ENST00000478887	LRRC2	Q9BYS8	371 aa		11.08	□□□□□ -0.64
SFI1-222	ENST00000478887	TM6SF1	Q9BZW5	370 aa		11.08	□□□□□ -0.64
SFI1-222	ENST00000478887	MAD2L2	Q9UI95	211 aa		11.08	□□□□□ -0.64
SFI1-222	ENST00000478887	HPS5	Q9UPZ3	1129 aa		11.08	□□□□□ -0.64
SFI1-222	ENST00000478887	CTDP1	Q9Y5B0	961 aa	Predicted RBP	11.08	□□□□□ -0.64
SFI1-222	ENST00000478887	PALM3	A6NDB9	673 aa	Predicted RBP	11.07	□□□□□ -0.64
SFI1-222	ENST00000478887	CCDC69	A6NI79	296 aa		11.07	□□□□□ -0.64
SFI1-222	ENST00000478887	STRN	O43815	780 aa		11.07	□□□□□ -0.64
SFI1-222	ENST00000478887	SEC24B	O95487	1268 aa		11.07	□□□□□ -0.64
SFI1-222	ENST00000478887	RPS6KB1	P23443	525 aa		11.07	□□□□□ -0.64
SFI1-222	ENST00000478887	PTPRE	P23469	700 aa		11.07	□□□□□ -0.64
SFI1-222	ENST00000478887	ANAPC15	P60006	121 aa		11.07	□□□□□ -0.64
SFI1-222	ENST00000478887	WDR78	Q5VTH9	848 aa		11.07	□□□□□ -0.64
SFI1-222	ENST00000478887	NCAPG2	Q86XI2	1143 aa		11.07	□□□□□ -0.64
SFI1-222	ENST00000478887	ABRA	Q8N0Z2	381 aa		11.07	□□□□□ -0.64
SFI1-222	ENST00000478887	CPXCR1	Q8N123	301 aa		11.07	□□□□□ -0.64
SFI1-222	ENST00000478887	STAG2	Q8N3U4	1231 aa		11.07	□□□□□ -0.64
SFI1-222	ENST00000478887	FBXL16	Q8N461	479 aa		11.07	□□□□□ -0.64
SFI1-222	ENST00000478887	ARMC5	Q96C12	935 aa		11.07	□□□□□ -0.64
SFI1-222	ENST00000478887	ABHD8	Q96I13	439 aa		11.07	□□□□□ -0.64
SFI1-222	ENST00000478887	TCEANC2	Q96MN5	208 aa		11.07	□□□□□ -0.64
SFI1-222	ENST00000478887	APBA2	Q99767	749 aa		11.07	□□□□□ -0.64
SFI1-222	ENST00000478887	AGXT2	Q9BYV1	514 aa		11.07	□□□□□ -0.64
SFI1-222	ENST00000478887	CWC22	Q9HCG8	908 aa	Known RBP	11.07	□□□□□ -0.64
SFI1-222	ENST00000478887	RAVER2	Q9HCJ3	691 aa	Known RBP	11.07	□□□□□ -0.64
SFI1-222	ENST00000478887	RIPK3	Q9Y572	518 aa		11.07	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms