RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 PDHBP11177 359 aa8.08□□□□□ -1.12
BRCA1-215ENST00000478531 ANTXR2P58335 489 aa8.08□□□□□ -1.12
BRCA1-215ENST00000478531 TMEM132BQ14DG7 1078 aa8.08□□□□□ -1.12
BRCA1-215ENST00000478531 WTAPQ15007 396 aa8.08□□□□□ -1.12
BRCA1-215ENST00000478531 TMEM67Q5HYA8 995 aa8.08□□□□□ -1.12
BRCA1-215ENST00000478531 FBXO46Q6PJ61 603 aaPredicted RBP8.08□□□□□ -1.12
BRCA1-215ENST00000478531 MB21D1Q8N884 522 aa8.08□□□□□ -1.12
BRCA1-215ENST00000478531 PRPF38AQ8NAV1 312 aaKnown RBP8.08□□□□□ -1.12
BRCA1-215ENST00000478531 RAET1EQ8TD07 263 aa8.08□□□□□ -1.12
BRCA1-215ENST00000478531 COA7Q96BR5 231 aa8.08□□□□□ -1.12
BRCA1-215ENST00000478531 LRRC2Q9BYS8 371 aa8.08□□□□□ -1.12
BRCA1-215ENST00000478531 SPATC1LQ9H0A9 340 aa8.08□□□□□ -1.12
BRCA1-215ENST00000478531 SENP2Q9HC62 589 aa8.08□□□□□ -1.12
BRCA1-215ENST00000478531 SRRDQ9UH36 339 aa8.08□□□□□ -1.12
BRCA1-215ENST00000478531 GABRQQ9UN88 632 aa8.08□□□□□ -1.12
BRCA1-215ENST00000478531 PTPN22Q9Y2R2 807 aa8.08□□□□□ -1.12
BRCA1-215ENST00000478531 PTCH2Q9Y6C5 1203 aa8.08□□□□□ -1.12
BRCA1-215ENST00000478531 GNRH1P01148 92 aa8.08□□□□□ -1.12
BRCA1-215ENST00000478531 HOXD10P28358 340 aa8.08□□□□□ -1.12
BRCA1-215ENST00000478531 MAPK4P31152 587 aa8.08□□□□□ -1.12
BRCA1-215ENST00000478531 MCM5P33992 734 aa8.08□□□□□ -1.12
BRCA1-215ENST00000478531 SLC16A2P36021 539 aa8.08□□□□□ -1.12
BRCA1-215ENST00000478531 SNAP25P60880 206 aa8.08□□□□□ -1.12
BRCA1-215ENST00000478531 SEC23AQ15436 765 aa8.08□□□□□ -1.12
BRCA1-215ENST00000478531 PKN2Q16513 984 aaKnown RBP8.08□□□□□ -1.12
BRCA1-215ENST00000478531 ADCK5Q3MIX3 580 aa8.08□□□□□ -1.12
BRCA1-215ENST00000478531 TTBK2Q6IQ55 1244 aa8.08□□□□□ -1.12
BRCA1-215ENST00000478531 GPR142Q7Z601 462 aa8.08□□□□□ -1.12
BRCA1-215ENST00000478531 NCAPG2Q86XI2 1143 aa8.08□□□□□ -1.12
BRCA1-215ENST00000478531 CPXCR1Q8N123 301 aa8.08□□□□□ -1.12
BRCA1-215ENST00000478531 CHURC1Q8WUH1 139 aa8.08□□□□□ -1.12
BRCA1-215ENST00000478531 TCEANC2Q96MN5 208 aa8.08□□□□□ -1.12
BRCA1-215ENST00000478531 GPHNQ9NQX3 736 aaPredicted RBP8.08□□□□□ -1.12
BRCA1-215ENST00000478531 ABCB7O75027 752 aa8.07□□□□□ -1.12
BRCA1-215ENST00000478531 ZBED4O75132 1171 aa8.07□□□□□ -1.12
BRCA1-215ENST00000478531 MYCP01106 439 aaPredicted RBP8.07□□□□□ -1.12
BRCA1-215ENST00000478531 HSPA4P34932 840 aa8.07□□□□□ -1.12
BRCA1-215ENST00000478531 FLT3LGP49771 235 aa8.07□□□□□ -1.12
BRCA1-215ENST00000478531 KRT32Q14532 448 aa8.07□□□□□ -1.12
BRCA1-215ENST00000478531 SLC9C1Q4G0N8 1177 aa8.07□□□□□ -1.12
BRCA1-215ENST00000478531 SNRNP48Q6IEG0 339 aaKnown RBP8.07□□□□□ -1.12
BRCA1-215ENST00000478531 CCDC174Q6PII3 467 aa8.07□□□□□ -1.12
BRCA1-215ENST00000478531 NFXL1Q6ZNB6 911 aa8.07□□□□□ -1.12
BRCA1-215ENST00000478531 PLEKHH3Q7Z736 793 aa8.07□□□□□ -1.12
BRCA1-215ENST00000478531 FAM160B2Q86V87 743 aa8.07□□□□□ -1.12
BRCA1-215ENST00000478531 ABHD8Q96I13 439 aa8.07□□□□□ -1.12
BRCA1-215ENST00000478531 JAKMIP1Q96N16 626 aaKnown RBP8.07□□□□□ -1.12
BRCA1-215ENST00000478531 MOV10L1Q9BXT6 1211 aaKnown RBP8.07□□□□□ -1.12
BRCA1-215ENST00000478531 CPVLQ9H3G5 476 aa8.07□□□□□ -1.12
BRCA1-215ENST00000478531 RAVER2Q9HCJ3 691 aaKnown RBP8.07□□□□□ -1.12
BRCA1-215ENST00000478531 HOMER2Q9NSB8 354 aa8.07□□□□□ -1.12
BRCA1-215ENST00000478531 HPS5Q9UPZ3 1129 aa8.07□□□□□ -1.12
BRCA1-215ENST00000478531 SNX14Q9Y5W7 946 aa8.07□□□□□ -1.12
BRCA1-215ENST00000478531 IVNS1ABPQ9Y6Y0 642 aa8.07□□□□□ -1.12
BRCA1-215ENST00000478531 RBBP6Q7Z6E9 1792 aaKnown RBP8.07□□□□□ -1.12
BRCA1-215ENST00000478531 ZNF236Q9UL36 1845 aa8.07□□□□□ -1.12
BRCA1-215ENST00000478531 DHX16O60231 1041 aaKnown RBP8.06□□□□□ -1.12
BRCA1-215ENST00000478531 PARP1P09874 1014 aaKnown RBP8.06□□□□□ -1.12
BRCA1-215ENST00000478531 CPA1P15085 419 aa8.06□□□□□ -1.12
BRCA1-215ENST00000478531 ERCC3P19447 782 aa8.06□□□□□ -1.12
BRCA1-215ENST00000478531 STAT3P40763 770 aa8.06□□□□□ -1.12
BRCA1-215ENST00000478531 ZNF543Q08ER8 600 aa8.06□□□□□ -1.12
BRCA1-215ENST00000478531 SYDE2Q5VT97 1194 aa8.06□□□□□ -1.12
BRCA1-215ENST00000478531 REPS2Q8NFH8 660 aa8.06□□□□□ -1.12
BRCA1-215ENST00000478531 SH3TC2Q8TF17 1288 aa8.06□□□□□ -1.12
BRCA1-215ENST00000478531 ANKS1AQ92625 1134 aa8.06□□□□□ -1.12
BRCA1-215ENST00000478531 NEK1Q96PY6 1258 aa8.06□□□□□ -1.12
BRCA1-215ENST00000478531 MYL10Q9BUA6 226 aa8.06□□□□□ -1.12
BRCA1-215ENST00000478531 LY9Q9HBG7 655 aa8.06□□□□□ -1.12
BRCA1-215ENST00000478531 SLC38A10Q9HBR0 1119 aa8.06□□□□□ -1.12
BRCA1-215ENST00000478531 ZNF214Q9UL59 606 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-215ENST00000478531 PRR12Q9ULL5 1215 aa8.06□□□□□ -1.12
BRCA1-215ENST00000478531 ADAMTS5Q9UNA0 930 aa8.06□□□□□ -1.12
BRCA1-215ENST00000478531 TNRC18O15417 2968 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-215ENST00000478531 CCDC69A6NI79 296 aa8.06□□□□□ -1.12
BRCA1-215ENST00000478531 CCDC85CA6NKD9 419 aa8.06□□□□□ -1.12
BRCA1-215ENST00000478531 SH2B2O14492 632 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-215ENST00000478531 SNHG28P0DPA3 235 aa8.06□□□□□ -1.12
BRCA1-215ENST00000478531 ELNP15502 786 aa8.06□□□□□ -1.12
BRCA1-215ENST00000478531 TAL1P17542 331 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-215ENST00000478531 CASTP20810 708 aaKnown RBP8.06□□□□□ -1.12
BRCA1-215ENST00000478531 FGD1P98174 961 aa8.06□□□□□ -1.12
BRCA1-215ENST00000478531 GPATCH4Q5T3I0 446 aaKnown RBP8.06□□□□□ -1.12
BRCA1-215ENST00000478531 CATIPQ7Z7H3 387 aa8.06□□□□□ -1.12
BRCA1-215ENST00000478531 RAB11FIP4Q86YS3 637 aa8.06□□□□□ -1.12
BRCA1-215ENST00000478531 IGDCC4Q8TDY8 1250 aa8.06□□□□□ -1.12
BRCA1-215ENST00000478531 NUP133Q8WUM0 1156 aa8.06□□□□□ -1.12
BRCA1-215ENST00000478531 NUDT12Q9BQG2 462 aa8.06□□□□□ -1.12
BRCA1-215ENST00000478531 TEX13BQ9BXU2 312 aa8.06□□□□□ -1.12
BRCA1-215ENST00000478531 USP26Q9BXU7 913 aa8.06□□□□□ -1.12
BRCA1-215ENST00000478531 UBA5Q9GZZ9 404 aa8.06□□□□□ -1.12
BRCA1-215ENST00000478531 BIN2Q9UBW5 565 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-215ENST00000478531 MCM3APO60318 1980 aa8.06□□□□□ -1.12
BRCA1-215ENST00000478531 ADCY3O60266 1144 aa8.05□□□□□ -1.12
BRCA1-215ENST00000478531 RXRAP19793 462 aa8.05□□□□□ -1.12
BRCA1-215ENST00000478531 CYP2B6P20813 491 aa8.05□□□□□ -1.12
BRCA1-215ENST00000478531 PRMT2P55345 433 aa8.05□□□□□ -1.12
BRCA1-215ENST00000478531 TSGA10IPQ3SY00 556 aa8.05□□□□□ -1.12
BRCA1-215ENST00000478531 ASPRV1Q53RT3 343 aa8.05□□□□□ -1.12
BRCA1-215ENST00000478531 CCDC144CPQ8IYA2 1237 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms