RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 TRPC5Q9UL62 973 aaPredicted RBP14.13□□□□□ -0.15
RTFDC1-207ENST00000477573 HPCAL4Q9UM19 191 aa14.13□□□□□ -0.15
RTFDC1-207ENST00000477573 C15orf41Q9Y2V0 281 aa14.13□□□□□ -0.15
RTFDC1-207ENST00000477573 RIC1Q4ADV7 1423 aa14.13□□□□□ -0.15
RTFDC1-207ENST00000477573 SRRM3A6NNA2 597 aaPredicted RBP14.13□□□□□ -0.15
RTFDC1-207ENST00000477573 VSNL1P62760 191 aa14.13□□□□□ -0.15
RTFDC1-207ENST00000477573 GNGT1P63211 74 aa14.13□□□□□ -0.15
RTFDC1-207ENST00000477573 MKRN4PQ13434 485 aaPredicted RBP14.13□□□□□ -0.15
RTFDC1-207ENST00000477573 KRT32Q14532 448 aa14.13□□□□□ -0.15
RTFDC1-207ENST00000477573 E2F5Q15329 346 aa14.13□□□□□ -0.15
RTFDC1-207ENST00000477573 NOL8Q76FK4 1167 aaKnown RBP14.13□□□□□ -0.15
RTFDC1-207ENST00000477573 KIAA0825Q8IV33 1275 aa14.13□□□□□ -0.15
RTFDC1-207ENST00000477573 NSMCE1Q8WV22 266 aa14.13□□□□□ -0.15
RTFDC1-207ENST00000477573 TTC14Q96N46 770 aa14.13□□□□□ -0.15
RTFDC1-207ENST00000477573 WDR24Q96S15 920 aa14.13□□□□□ -0.15
RTFDC1-207ENST00000477573 ZSWIM6Q9HCJ5 1215 aa14.13□□□□□ -0.15
RTFDC1-207ENST00000477573 CDC23Q9UJX2 597 aa14.13□□□□□ -0.15
RTFDC1-207ENST00000477573 LIMCH1Q9UPQ0 1083 aa14.13□□□□□ -0.15
RTFDC1-207ENST00000477573 PPP2R2CQ9Y2T4 447 aa14.13□□□□□ -0.15
RTFDC1-207ENST00000477573 NDUFB9Q9Y6M9 179 aa14.13□□□□□ -0.15
RTFDC1-207ENST00000477573 RTL9Q8NET4 1388 aa14.13□□□□□ -0.15
RTFDC1-207ENST00000477573 BCORQ6W2J9 1755 aa14.13□□□□□ -0.15
RTFDC1-207ENST00000477573 BTAF1O14981 1849 aa14.13□□□□□ -0.15
RTFDC1-207ENST00000477573 SLC27A2O14975 620 aa14.12□□□□□ -0.15
RTFDC1-207ENST00000477573 PDE8BO95263 885 aa14.12□□□□□ -0.15
RTFDC1-207ENST00000477573 NTSR2O95665 410 aa14.12□□□□□ -0.15
RTFDC1-207ENST00000477573 ZFYP08048 801 aaPredicted RBP14.12□□□□□ -0.15
RTFDC1-207ENST00000477573 ZNF589Q86UQ0 364 aaPredicted RBP14.12□□□□□ -0.15
RTFDC1-207ENST00000477573 TMOD4Q9NZQ9 345 aa14.12□□□□□ -0.15
RTFDC1-207ENST00000477573 SPATA7Q9P0W8 599 aa14.12□□□□□ -0.15
RTFDC1-207ENST00000477573 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.12□□□□□ -0.15
RTFDC1-207ENST00000477573 ZC3H4Q9UPT8 1303 aaKnown RBP14.12□□□□□ -0.15
RTFDC1-207ENST00000477573 ABLIM1O14639 778 aa14.12□□□□□ -0.15
RTFDC1-207ENST00000477573 RNF113AO15541 343 aaKnown RBP14.12□□□□□ -0.15
RTFDC1-207ENST00000477573 CREB3O43889 395 aa14.12□□□□□ -0.15
RTFDC1-207ENST00000477573 GNAT1P11488 350 aa14.12□□□□□ -0.15
RTFDC1-207ENST00000477573 FKBP4Q02790 459 aaKnown RBP eCLIP14.12□□□□□ -0.15
RTFDC1-207ENST00000477573 USPL1Q5W0Q7 1092 aa14.12□□□□□ -0.15
RTFDC1-207ENST00000477573 CCDC80Q76M96 950 aa14.12□□□□□ -0.15
RTFDC1-207ENST00000477573 RUFY3Q7L099 469 aa14.12□□□□□ -0.15
RTFDC1-207ENST00000477573 SNRNP27Q8WVK2 155 aaKnown RBP14.12□□□□□ -0.15
RTFDC1-207ENST00000477573 ZNF512BQ96KM6 892 aaPredicted RBP14.12□□□□□ -0.15
RTFDC1-207ENST00000477573 TRPV5Q9NQA5 729 aa14.12□□□□□ -0.15
RTFDC1-207ENST00000477573 BIN2Q9UBW5 565 aaPredicted RBP14.12□□□□□ -0.15
RTFDC1-207ENST00000477573 SAMM50Q9Y512 469 aa14.12□□□□□ -0.15
RTFDC1-207ENST00000477573 ONECUT3O60422 494 aaPredicted RBP14.11□□□□□ -0.15
RTFDC1-207ENST00000477573 LINGO3P0C6S8 592 aa14.11□□□□□ -0.15
RTFDC1-207ENST00000477573 ADORA1P30542 326 aa14.11□□□□□ -0.15
RTFDC1-207ENST00000477573 IGHMBP2P38935 993 aaKnown RBP14.11□□□□□ -0.15
RTFDC1-207ENST00000477573 PABPC4Q13310 644 aaKnown RBP eCLIP14.11□□□□□ -0.153e-10■■■■□ 25.4
RTFDC1-207ENST00000477573 PUM3Q15397 648 aaKnown RBP14.11□□□□□ -0.15
RTFDC1-207ENST00000477573 TSNAXIP1Q2TAA8 658 aa14.11□□□□□ -0.15
RTFDC1-207ENST00000477573 ZSCAN31Q96LW9 406 aaPredicted RBP14.11□□□□□ -0.15
RTFDC1-207ENST00000477573 BPIFA3Q9BQP9 254 aa14.11□□□□□ -0.15
RTFDC1-207ENST00000477573 CCNL1Q9UK58 526 aaPredicted RBP14.11□□□□□ -0.15
RTFDC1-207ENST00000477573 WDR37Q9Y2I8 494 aa14.11□□□□□ -0.15
RTFDC1-207ENST00000477573 LAMB2P55268 1798 aa14.11□□□□□ -0.15
RTFDC1-207ENST00000477573 RPS6KA4O75676 772 aa14.1□□□□□ -0.15
RTFDC1-207ENST00000477573 ZNF202O95125 648 aa14.1□□□□□ -0.15
RTFDC1-207ENST00000477573 VCAM1P19320 739 aa14.1□□□□□ -0.15
RTFDC1-207ENST00000477573 IBSPP21815 317 aaPredicted RBP14.1□□□□□ -0.15
RTFDC1-207ENST00000477573 AK2P54819 239 aa14.1□□□□□ -0.15
RTFDC1-207ENST00000477573 MPP3Q13368 585 aa14.1□□□□□ -0.15
RTFDC1-207ENST00000477573 XRCC4Q13426 336 aa14.1□□□□□ -0.15
RTFDC1-207ENST00000477573 STIM1Q13586 685 aa14.1□□□□□ -0.15
RTFDC1-207ENST00000477573 MYBPC3Q14896 1274 aa14.1□□□□□ -0.15
RTFDC1-207ENST00000477573 ANKRD1Q15327 319 aa14.1□□□□□ -0.15
RTFDC1-207ENST00000477573 ZMYM1Q5SVZ6 1142 aa14.1□□□□□ -0.15
RTFDC1-207ENST00000477573 OGFOD1Q8N543 542 aa14.1□□□□□ -0.15
RTFDC1-207ENST00000477573 VGLL2Q8N8G2 317 aa14.1□□□□□ -0.15
RTFDC1-207ENST00000477573 GBP7Q8N8V2 638 aaPredicted RBP14.1□□□□□ -0.15
RTFDC1-207ENST00000477573 SMCR8Q8TEV9 937 aaPredicted RBP14.1□□□□□ -0.15
RTFDC1-207ENST00000477573 COG1Q8WTW3 980 aa14.1□□□□□ -0.15
RTFDC1-207ENST00000477573 LPIN2Q92539 896 aa14.1□□□□□ -0.15
RTFDC1-207ENST00000477573 TEKT1Q969V4 418 aa14.1□□□□□ -0.15
RTFDC1-207ENST00000477573 ATRNO75882 1429 aa14.1□□□□□ -0.15
RTFDC1-207ENST00000477573 GOLGA8KD6RF30 607 aa14.1□□□□□ -0.15
RTFDC1-207ENST00000477573 BUB1BO60566 1050 aaPredicted RBP14.1□□□□□ -0.15
RTFDC1-207ENST00000477573 UQCRFS1P1P0C7P4 283 aa14.1□□□□□ -0.15
RTFDC1-207ENST00000477573 RPL13P26373 211 aaKnown RBP14.1□□□□□ -0.15
RTFDC1-207ENST00000477573 CNGA1P29973 690 aa14.1□□□□□ -0.15
RTFDC1-207ENST00000477573 MAGEA10P43363 369 aaPredicted RBP14.1□□□□□ -0.15
RTFDC1-207ENST00000477573 TTF1Q15361 905 aaPredicted RBP14.1□□□□□ -0.15
RTFDC1-207ENST00000477573 BLOC1S2Q6QNY1 142 aa14.1□□□□□ -0.15
RTFDC1-207ENST00000477573 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.1□□□□□ -0.15
RTFDC1-207ENST00000477573 SH2B1Q9NRF2 756 aaPredicted RBP14.1□□□□□ -0.15
RTFDC1-207ENST00000477573 ZNF510Q9Y2H8 683 aa14.1□□□□□ -0.15
RTFDC1-207ENST00000477573 GMEB1Q9Y692 573 aa14.1□□□□□ -0.15
RTFDC1-207ENST00000477573 LRP5O75197 1615 aa14.1□□□□□ -0.15
RTFDC1-207ENST00000477573 ZPR1O75312 459 aa14.09□□□□□ -0.15
RTFDC1-207ENST00000477573 NR1I2O75469 434 aa14.09□□□□□ -0.15
RTFDC1-207ENST00000477573 SLC5A1P13866 664 aa14.09□□□□□ -0.15
RTFDC1-207ENST00000477573 YY1P25490 414 aa14.09□□□□□ -0.15
RTFDC1-207ENST00000477573 P3H4Q92791 437 aa14.09□□□□□ -0.15
RTFDC1-207ENST00000477573 SPATA32Q96LK8 384 aa14.09□□□□□ -0.15
RTFDC1-207ENST00000477573 ANKRD27Q96NW4 1050 aa14.09□□□□□ -0.15
RTFDC1-207ENST00000477573 CDC5LQ99459 802 aaKnown RBP14.09□□□□□ -0.15
RTFDC1-207ENST00000477573 DSCC1Q9BVC3 393 aa14.09□□□□□ -0.15
RTFDC1-207ENST00000477573 PHACTR1Q9C0D0 580 aa14.09□□□□□ -0.15
RTFDC1-207ENST00000477573 XPO4Q9C0E2 1151 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms