RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 GPAT2Q6NUI2 795 aa10.79□□□□□ -0.68
PGK1-204ENST00000477335 POTEEQ6S8J3 1075 aa10.79□□□□□ -0.68
PGK1-204ENST00000477335 BTNL9Q6UXG8 535 aa10.79□□□□□ -0.68
PGK1-204ENST00000477335 PRRT2Q7Z6L0 340 aaPredicted RBP10.79□□□□□ -0.68
PGK1-204ENST00000477335 ADGRF4Q8IZF3 695 aa10.79□□□□□ -0.68
PGK1-204ENST00000477335 SLC10A4Q96EP9 437 aa10.79□□□□□ -0.68
PGK1-204ENST00000477335 MS4A4AQ96JQ5 239 aa10.79□□□□□ -0.68
PGK1-204ENST00000477335 SPZ1Q9BXG8 430 aa10.79□□□□□ -0.68
PGK1-204ENST00000477335 RPAP3Q9H6T3 665 aaPredicted RBP10.79□□□□□ -0.68
PGK1-204ENST00000477335 RIOX1Q9H6W3 641 aa10.79□□□□□ -0.68
PGK1-204ENST00000477335 SH2D4AQ9H788 454 aa10.79□□□□□ -0.68
PGK1-204ENST00000477335 JMJD4Q9H9V9 463 aa10.79□□□□□ -0.68
PGK1-204ENST00000477335 ORC3Q9UBD5 711 aaPredicted RBP10.79□□□□□ -0.68
PGK1-204ENST00000477335 STK36Q9NRP7 1315 aa10.79□□□□□ -0.68
PGK1-204ENST00000477335 RLFQ13129 1914 aa10.78□□□□□ -0.68
PGK1-204ENST00000477335 FAM155AB1AL88 458 aaPredicted RBP10.78□□□□□ -0.68
PGK1-204ENST00000477335 C19orf81C9J6K1 198 aa10.78□□□□□ -0.68
PGK1-204ENST00000477335 CPLX1O14810 134 aa10.78□□□□□ -0.68
PGK1-204ENST00000477335 ADAMTS3O15072 1205 aa10.78□□□□□ -0.68
PGK1-204ENST00000477335 WDR46O15213 610 aaKnown RBP10.78□□□□□ -0.68
PGK1-204ENST00000477335 PRPF3O43395 683 aaKnown RBP10.78□□□□□ -0.68
PGK1-204ENST00000477335 USP14P54578 494 aa10.78□□□□□ -0.68
PGK1-204ENST00000477335 PPP2R5BQ15173 497 aa10.78□□□□□ -0.68
PGK1-204ENST00000477335 GPATCH4Q5T3I0 446 aaKnown RBP10.78□□□□□ -0.68
PGK1-204ENST00000477335 SYDE2Q5VT97 1194 aa10.78□□□□□ -0.68
PGK1-204ENST00000477335 OTUD7BQ6GQQ9 843 aa10.78□□□□□ -0.68
PGK1-204ENST00000477335 TYW1BQ6NUM6 668 aa10.78□□□□□ -0.68
PGK1-204ENST00000477335 LPAR1Q92633 364 aa10.78□□□□□ -0.68
PGK1-204ENST00000477335 MTMR8Q96EF0 704 aa10.78□□□□□ -0.68
PGK1-204ENST00000477335 PIGSQ96S52 555 aa10.78□□□□□ -0.68
PGK1-204ENST00000477335 VAT1LQ9HCJ6 419 aa10.78□□□□□ -0.68
PGK1-204ENST00000477335 SMC3Q9UQE7 1217 aa10.78□□□□□ -0.68
PGK1-204ENST00000477335 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.78□□□□□ -0.68
PGK1-204ENST00000477335 V9GY48 417 aaPredicted RBP10.78□□□□□ -0.68
PGK1-204ENST00000477335 PARP14Q460N5 1801 aa10.77□□□□□ -0.68
PGK1-204ENST00000477335 CCDC196A0A1B0GTZ2 297 aa10.77□□□□□ -0.69
PGK1-204ENST00000477335 TMEM88BA6NKF7 163 aa10.77□□□□□ -0.69
PGK1-204ENST00000477335 GNAQP50148 359 aa10.77□□□□□ -0.69
PGK1-204ENST00000477335 SSRP1Q08945 709 aaKnown RBP10.77□□□□□ -0.69
PGK1-204ENST00000477335 GADL1Q6ZQY3 521 aa10.77□□□□□ -0.69
PGK1-204ENST00000477335 BRI3BPQ8WY22 251 aa10.77□□□□□ -0.69
PGK1-204ENST00000477335 GPKOWQ92917 476 aaPredicted RBP eCLIP10.77□□□□□ -0.69
PGK1-204ENST00000477335 ZIC5Q96T25 663 aa10.77□□□□□ -0.69
PGK1-204ENST00000477335 RNF26Q9BY78 433 aaPredicted RBP10.77□□□□□ -0.69
PGK1-204ENST00000477335 PRR12Q9ULL5 1215 aa10.77□□□□□ -0.69
PGK1-204ENST00000477335 ISY1Q9ULR0 285 aaKnown RBP10.77□□□□□ -0.69
PGK1-204ENST00000477335 ZDHHC9Q9Y397 364 aa10.77□□□□□ -0.69
PGK1-204ENST00000477335 BAZ2BQ9UIF8 2168 aaKnown RBP10.77□□□□□ -0.69
PGK1-204ENST00000477335 DHX16O60231 1041 aaKnown RBP10.76□□□□□ -0.69
PGK1-204ENST00000477335 PEX10O60683 326 aa10.76□□□□□ -0.69
PGK1-204ENST00000477335 PLA2G6O60733 806 aa10.76□□□□□ -0.69
PGK1-204ENST00000477335 HSP90AA1P07900 732 aaKnown RBP10.76□□□□□ -0.69
PGK1-204ENST00000477335 SLC10A3P09131 477 aa10.76□□□□□ -0.69
PGK1-204ENST00000477335 SMARCA1P28370 1054 aa10.76□□□□□ -0.69
PGK1-204ENST00000477335 ZNF157P51786 506 aaPredicted RBP10.76□□□□□ -0.69
PGK1-204ENST00000477335 STAT2P52630 851 aa10.76□□□□□ -0.69
PGK1-204ENST00000477335 HTRA3P83110 453 aa10.76□□□□□ -0.69
PGK1-204ENST00000477335 GUCY1B3Q02153 619 aa10.76□□□□□ -0.69
PGK1-204ENST00000477335 WWC2Q6AWC2 1192 aa10.76□□□□□ -0.69
PGK1-204ENST00000477335 RGMBQ6NW40 437 aa10.76□□□□□ -0.69
PGK1-204ENST00000477335 CATSPERGQ6ZRH7 1159 aa10.76□□□□□ -0.69
PGK1-204ENST00000477335 HOMER1Q86YM7 354 aa10.76□□□□□ -0.69
PGK1-204ENST00000477335 REPS2Q8NFH8 660 aa10.76□□□□□ -0.69
PGK1-204ENST00000477335 KIFC2Q96AC6 838 aa10.76□□□□□ -0.69
PGK1-204ENST00000477335 PTPN18Q99952 460 aa10.76□□□□□ -0.69
PGK1-204ENST00000477335 LZTS2Q9BRK4 669 aa10.76□□□□□ -0.69
PGK1-204ENST00000477335 ALG1Q9BT22 464 aa10.76□□□□□ -0.69
PGK1-204ENST00000477335 TANGO6Q9C0B7 1094 aa10.76□□□□□ -0.69
PGK1-204ENST00000477335 TMOD4Q9NZQ9 345 aa10.76□□□□□ -0.69
PGK1-204ENST00000477335 FEM1BQ9UK73 627 aa10.76□□□□□ -0.69
PGK1-204ENST00000477335 BTBD19C9JJ37 291 aa10.75□□□□□ -0.69
PGK1-204ENST00000477335 STXBP3O00186 592 aa10.75□□□□□ -0.69
PGK1-204ENST00000477335 FLOT1O75955 427 aa10.75□□□□□ -0.69
PGK1-204ENST00000477335 CDKL5O76039 1030 aa10.75□□□□□ -0.69
PGK1-204ENST00000477335 DEXIO95424 95 aa10.75□□□□□ -0.69
PGK1-204ENST00000477335 SCG2P13521 617 aa10.75□□□□□ -0.69
PGK1-204ENST00000477335 SYT1P21579 422 aa10.75□□□□□ -0.69
PGK1-204ENST00000477335 HMGN5P82970 282 aaKnown RBP10.75□□□□□ -0.69
PGK1-204ENST00000477335 SNAPC2Q13487 334 aa10.75□□□□□ -0.69
PGK1-204ENST00000477335 NPY5RQ15761 445 aa10.75□□□□□ -0.69
PGK1-204ENST00000477335 CDC37Q16543 378 aaPredicted RBP10.75□□□□□ -0.69
PGK1-204ENST00000477335 PFKFB3Q16875 520 aaPredicted RBP10.75□□□□□ -0.69
PGK1-204ENST00000477335 QRICH1Q2TAL8 776 aa10.75□□□□□ -0.69
PGK1-204ENST00000477335 CPLX2Q6PUV4 134 aaKnown RBP10.75□□□□□ -0.69
PGK1-204ENST00000477335 PROCA1Q8NCQ7 364 aaPredicted RBP10.75□□□□□ -0.69
PGK1-204ENST00000477335 ATG4CQ96DT6 458 aa10.75□□□□□ -0.69
PGK1-204ENST00000477335 SLF1Q9BQI6 1058 aa10.75□□□□□ -0.69
PGK1-204ENST00000477335 RANBP17Q9H2T7 1088 aaKnown RBP10.75□□□□□ -0.69
PGK1-204ENST00000477335 VPS54Q9P1Q0 977 aa10.75□□□□□ -0.69
PGK1-204ENST00000477335 PPP1R9AQ9ULJ8 1098 aa10.75□□□□□ -0.69
PGK1-204ENST00000477335 ABT1Q9ULW3 272 aaKnown RBP10.75□□□□□ -0.69
PGK1-204ENST00000477335 AGTPBP1Q9UPW5 1226 aa10.75□□□□□ -0.69
PGK1-204ENST00000477335 MTMR6Q9Y217 621 aa10.75□□□□□ -0.69
PGK1-204ENST00000477335 ZNF536O15090 1300 aa10.75□□□□□ -0.69
PGK1-204ENST00000477335 CCL15-CCL14A0A0B4J2E2 113 aa10.74□□□□□ -0.69
PGK1-204ENST00000477335 TESPA1A2RU30 521 aaPredicted RBP10.74□□□□□ -0.69
PGK1-204ENST00000477335 SPDYE16A6NNV3 312 aaPredicted RBP10.74□□□□□ -0.69
PGK1-204ENST00000477335 USP17L15C9J2P7 530 aa10.74□□□□□ -0.69
PGK1-204ENST00000477335 USP17L13C9JLJ4 530 aa10.74□□□□□ -0.69
PGK1-204ENST00000477335 USP17L11C9JVI0 530 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms